Array 1 8740-10090 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPBF01000044.1 Campylobacter concisus strain AAUH-3UCce 1101662, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8740 30 100.0 36 .............................. AAAAAGCTAACGCTTAAATTAGATTATAATCGTATG 8806 30 100.0 35 .............................. AACGAATATCGTGTATATCGTTTCCGATTTGATCA 8871 30 100.0 35 .............................. TTTGAGATTGATCCTTGTCGTTTTGTTGCTCCTTA 8936 30 100.0 35 .............................. AGGGATAAAATTGTTGAAGAGTGCTTGCCTGATCC 9001 30 100.0 36 .............................. TGCCAATTTTCTTTACAAGAAATTCAATAAAATTAA 9067 30 100.0 37 .............................. ATACCGTCCCATTTTCAGTAAGTATGACAACACCTTG 9134 30 100.0 36 .............................. CAAAGACCAACAAAGGTCTTATCGAAAACGATCAAA 9200 30 100.0 38 .............................. AATACATCTTTAAATTCATCCCTCATCCCATAGCCATC 9268 30 100.0 35 .............................. ACCCCTGGCGGATATTTTGATGATACGAGCGTGGC 9333 30 100.0 37 .............................. GTCCCTCAAAAAAGCCAGTAAAAAAGGCTTTTACATG 9400 30 100.0 34 .............................. ACACCTGCGAGGCTAGCTAAATACTCTTTGCTTT 9464 30 100.0 35 .............................. TCAATTCTAGGATCATCTGGCATATTTTCAAGCCT 9529 30 100.0 38 .............................. TCGCGTAAGAGTAGGCTTTAACGTCTGCTTTGATGCCT 9597 30 100.0 37 .............................. ATCCGGTTGATGATAATGCAATTGTTTTTAACAGCGT 9664 30 100.0 36 .............................. TTTTCATCAGTATAAGTGCGAGCTTGAACAGCTTGA 9730 30 100.0 36 .............................. GATGCAGAAATGGGCGAATATATAGAGGTAAGGTAT 9796 30 100.0 36 .............................. ATGCCTAGCTACACCATAGCAGACGAAACAACAAGA 9862 30 100.0 37 .............................. CCAACTAACCCTAACCCTGAGAAGGTAGCTCAAGACC 9929 30 100.0 36 .............................. ATCATTTCATCGTCACGCTCAAAGCGTTGATGATAT 9995 30 100.0 36 .............................. AAACGTTTTAGGCCTTTGCCTCTATCGCGCTCTTTG 10061 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 100.0 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : CTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCCGGTAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATTAAGCTTAAAAAGTGTATCTGCGAGGACGCGCCTTATGAAGGCTTTGGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGAGGCTTGGCGTATTTATACACGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : CATATGTTTTCAACTTCATTTTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGATTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGATAAGCAATACTTTAAAAGTGAAGTATCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTTGTTGCTTTTTATTTTGTGGCTGTGCTTGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //