Array 1 30595-28198 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHY01000106.1 Paenibacillus alvei strain G25-118 G25-118_contig000106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 30594 32 100.0 34 ................................ ACCACTTCCACGAATTGAGTATCTGTTGATTCGT 30528 32 100.0 33 ................................ CGTTGTTGAAAATCAGGAATAGCCACCATAAGA 30463 32 100.0 37 ................................ TCTATTGCATATCTGCTCCCGATGGGAACATCGAGTG 30394 32 100.0 39 ................................ ACCACCTGTTCGGCGTTAAAATTGCCGTAAGATGATACA 30323 32 100.0 33 ................................ TTTGATAATAGACAGCCATCCCGTAGCTGCTTC 30258 32 100.0 39 ................................ CATCAGGGAGGTAACCACCTTCAATGGTTAGCCTGTACG 30187 32 100.0 36 ................................ TATCAAGGTATCTGTGAACAGGAGGATAAGGTCGTC 30119 32 100.0 37 ................................ AGAATAGGCAATGCTTGTCGTGCAATGAGTTGGGCTG 30050 32 100.0 35 ................................ CTGGTGGATCCTTTTGTCTTAGGACTTTTAATAAC 29983 32 100.0 36 ................................ AACGTCGAGGTAAAGGACTTGTCATCTCAAATACAG 29915 32 100.0 35 ................................ TCCACTCGCCTCTGGATTGATGGATTCGAAAGATT 29848 32 100.0 36 ................................ TATTGCATACAATGGCGGCATACCTCCTGGAACAAA 29780 32 100.0 35 ................................ GCAATCTACAACAAAACGCCAACGCCAGCACGGGT 29713 32 100.0 35 ................................ ATCAAAGGGCCAATGTTGGACGGACTTCGAAAGCA 29646 32 100.0 33 ................................ AGATATGATCATAAGCCGGTTTGGATTACAAGA 29581 32 100.0 36 ................................ TGACTTGGCAGCTGACGACTACACCGCAGAAGCGAT 29513 32 100.0 36 ................................ CGTTGATACAGCTGATATGCAATTCTGAGCTGGTTC 29445 32 100.0 34 ................................ AGTCCGCTGTATGGATTTTATGTCCGGGGTTTAT 29379 32 100.0 35 ................................ AGATCATTGACGATGTACCAGACGGATGAAGATCA 29312 32 100.0 35 ................................ AGTCCAAGAATGGTTTCGATAGAGTCAGAAGGAAG 29245 32 100.0 39 ................................ TGAAATCATTGTTTGATCATTTCAAAACTAGGAACGAGC 29174 32 100.0 36 ................................ ATCGGGAACCAGATATAAATAAAATCGCCATGAAAG 29106 32 100.0 38 ................................ ACCATGACGGATGGGGATTTAAGTACATCTGGTACATT 29036 32 100.0 35 ................................ TTTTCTAGTGAATCCTAGATTCAAAAACTCCGTTA 28969 32 100.0 35 ................................ AGCTCGGGAATGCTAAGGGGAATCGGATAGACCTT 28902 32 100.0 38 ................................ CGACCGCGGCCTTGTATGCAATGAATAGAGACAATCCA 28832 32 100.0 35 ................................ CATCATTCATAGAAGACGGATAAGAAACACTATGA 28765 32 100.0 35 ................................ CTAATTGATATTCCAGATAGCACGGAAGGTATTAC 28698 32 100.0 36 ................................ CCCCATAGCACGAATCCTCTGGAAAAACGTGTCGCG 28630 32 100.0 35 ................................ TAAGGAACACGGGTTAAAGTTAGATGATGCTACAG 28563 32 100.0 35 ................................ TTGTCTGCTTTTCAAAGCGTCACCCCCTCATTGCC 28496 32 100.0 36 ................................ TACCGTATACGATCATATCCAAAATTACGGATACTG 28428 32 100.0 35 ................................ AAGAGCAATGTTTATCGAAAAACTAGTAGGTAAGT 28361 32 100.0 33 ................................ ACGGGTATCCTGGATGGTTTGGGTAAGGAATAT 28296 32 100.0 37 ................................ ATTGGAACGAGTCCCAGAAGGATTACGACTCACGATA 28227 30 84.4 0 ...............-.......-..G...TA | ========== ====== ====== ====== ================================ ======================================= ================== 36 32 99.6 36 GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Left flank : CCCTCCATTTTTATGGAAGTAGGTGTATGGGATTGTTGGTGTTAATTACGTATGATGTCAGCACTACGAGTAGCGACGGACAGAGACGGTTGCGCAAGGTGTCGAAGACGTGCCAGAATTATGGTCAGCGTGTACAGCATTCGGTGTTCGAATGTAATGTAGATGCCACTCAATTCGCTGCTCTCAAGATACAGCTCGCGGATATCATTGATCAGAAGGAAGACAGTCTTCGATTCTATCAGTTAGGTAACAACTATAAGAACAAGGTTGAGCATATCGGCGTGAAGGAATCGATTGATTTGGATGGGTCATTGATTTTCTAGTGCGAATGTGAAGTGCACATGATTTCTCTGGGACATTCGCACCTGATTTTTGCCATTTTTATACCAGTTCCATGATGTTGATGTAAGGTTCTCAGTTGTTTTTTATTAAAAATCGCGATTTTTGATTGAATAAATCATTATATTTAGACATTTTGATTGTTTTAGTCAATAATCGCT # Right flank : CTAAAACGTATATTCGCTGACAAAGTTTGTAACTTGCTGCTTCTATAATAGAGGTATTCTATCGTATAGAGGTGAAAAAGTAGTATGGACTCGACAATTCTTGAGCTGCGGCTTCATCCTAATGTTATCCCCTATTAGCATATTTACTGTTTTATTTCAACACTTAAAAGGACTGGGGTAATCATTGTCCCGCTTGCCATTCATCTGTTGTGGATTCCCAATGGGCATGGGGTTAGATATGTAGTATCGGCATATCTCATTTTAAAATGGGGCAAAGCATTATTTTATATCTTGAATAGCGTTCATTTCTCTTATGAACGAAGAAGCTATGTGCTGACTGCTAATGAAATCGTAATTCATTGGGGAAACATATGGTTCACCAACTCATCGATTATCCCCACTCAGTCGAAGATGGATGACTTGCCTGACGGCAGCCTGCTGTTCGAAGCAACCTGAATCATGAGCAGAGCTTTCTGAAATGGATTTCGCAGTATGGATCT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.20,-9.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 39913-39075 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHY01000106.1 Paenibacillus alvei strain G25-118 G25-118_contig000106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================== ================== 39912 32 96.9 33 ...........T.................... CTTCTCACGCTGCAGATCATGAAGCCGTCATTA 39847 32 100.0 35 ................................ TGGTGTTAGTCCTTGTGGTTGAGTTCGCTGAACTG 39780 32 100.0 35 ................................ CGTCACTATGTCACACCCTTTTTATTGCATCATAA 39713 32 100.0 35 ................................ GGTATGTGCCCCCGCCTTGCTGGTGACTAAAAGAA 39646 32 100.0 35 ................................ ACTGAAGATGGGGACAAGCACAATCCGGATAAATC 39579 32 100.0 36 ................................ TTCATATCCTCCACGGCTGCTGGTGCGATTTTTGCA 39511 32 100.0 33 ................................ CTCTATAGAAATGGGGAAAGTGCTGCTGGCATC 39446 32 100.0 38 ................................ TGTTCCTAGCGAGGAAGGCCAGCACCCGGAGGAAGGTA 39376 32 100.0 42 ................................ GTTAAATCTAAGATGTAAAGCCGCTGATTCGGCACGTCTACA 39302 32 96.9 34 ..........C..................... GTTAATGCGCCGCAACCGGATGCGCCCCAAGTAA 39236 32 100.0 33 ................................ TTATCTGACGGACTGTACTCGGAAAACGGCAAT 39171 32 100.0 33 ................................ TCGGACATTCCGGGGCGAATATATCGTACGGTC 39106 32 96.9 0 ............G................... | ========== ====== ====== ====== ================================ ========================================== ================== 13 32 99.3 35 GTCGCATCCTACACGGATGCGTGGATTGAAAT # Left flank : ACAAGAAGATTGGCGATGCCGTTAAGGCAGGCGAGTCCCTGGTAACGATCCATGCGAACCGTGAGAACGTGGATGACGTCATCGCAAAAATTTACGAAAACATTCGGATTAGCGATCATGCTGAGGCACCGGTGCTTGTCCATGATATCGTAACGGAATAAATAGGAAAAGAAGAGCCGTGTATGACGAAGGGAGTATTTTGACCTGAGTCATGCACGGTTTTTGTATTTTGTAGTTGTTTTATAAATATAGTATTTACCTAAATTAAAAGAATGGTATATATTGGGGTGTAGGTGTGGTCATAAAGCTGGAATAATTCTGGTACGAATGTATAGTGCACATGAAAATCCCGGGAGATTCGCACCTGTTATTATGCATTTTTATCCTTTTTTTTCTCTATAACATTGCATCTATCTTGGTTTTTGACCGAAAATTTCGTTATAATGAGTGAACAAATCATTAACGGAAGTGAATTTATAAATATAGGCTCACTTTCCGCT # Right flank : GCGCCAGATAAGTAGTAACTACCTGCATTTATTCCGTCGCAACCTACGTAGATCGTAATTTCTGGTCGTGAAGGTTGTACGGAGTGGTGGAGAGTCATATCCGATATGAGAGCATGAATCGAATACCTAATAACCTGCACAGGACATCAATGGAACTAATGCTAGTTCGAGAGGTGTCCTTTTTCTTGTTCACATATGTCGTTTACTATATACAAATAATATGGTAAATTGTAGATAATTGTGGGGTTCTGTAGAAATAGGTCAAAAGTATTGCCTTTGTTGTCTTTGTTCATATCTTGAAAATCATGACACACAAAGGAGCGTTGATATGTTTTCGATTGCTCATATTCGTGAAAGCGACCAACAGGTACAGACGGTCGAGGCGCATTTGTTAGAGGTGAGAACATTAGCGGAAGGTTACGGTAGTAAGCTGGGTGTCCCTCATGTGACCGGACTAGCAGGTATGCTCCATGACATGGGAAAATATTCACAAGAGTTTT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACACGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.30,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 19586-16919 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHY01000027.1 Paenibacillus alvei strain G25-118 G25-118_contig000027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 19585 30 100.0 35 .............................. ATAGATCCACTCAGGACATTAATAAGTGGATCTTG 19520 30 100.0 36 .............................. TGACTGAGCGATACCTTTACGACATGTATTCGTTCG 19454 30 100.0 36 .............................. AGTGCGAATCGCTAGAATTTTTCTGCGAGGAGGTTA 19388 30 100.0 36 .............................. AATGCAATCCCTAAGAAATTCGCGCTTTTGGGCCAA 19322 30 100.0 36 .............................. TCCAAATGTAAAAGTGCTGCTGATCAGCTCGCTAGA 19256 30 100.0 36 .............................. CTTGTAAGTGGTTTACCATGGAGCAATCCTCCCGGA 19190 30 100.0 35 .............................. AAGCGGCACGGGCTATTTTCGCGCAGGATAACGCC 19125 30 100.0 36 .............................. TGGTAAGGCAATGCACCTTTTATGGGCAGATTACTA 19059 30 100.0 36 .............................. ATCTCTGGAACCTCGATTTCGAATCTGAAACATACC 18993 30 100.0 36 .............................. AATACCACAAAAGTTACCGGTAGTTTTTCTATAAGT 18927 30 100.0 35 .............................. TATCATCCGCCTGCAGAAGCAAATGAAGTTGAGCG 18862 30 100.0 36 .............................. AGCGTTCGAGGATGCAAGTGATTTCGATATGAACAA 18796 30 100.0 37 .............................. CATGCAGTTGTGTTGAGTCAGCCCAAGAGGTGCAAAC 18729 30 100.0 36 .............................. AATATATTGGCCGTAATTCCTTCATGAACTGTGTTA 18663 30 100.0 37 .............................. GCGTAAGGAGCGGGAAAGATTCGAAAAATTACTCGCT 18596 30 100.0 36 .............................. TAAATTCTCGCTCCAGACATGCTGTCACCTTGTGCT 18530 30 100.0 36 .............................. TAGGGGGCGGGACATTTGGCATTCATGAAAAAGAAA 18464 30 100.0 37 .............................. CGAGGTTATCCCCCAACAGTACGCGAGATTGGCAAGG 18397 30 100.0 36 .............................. AGGAGACGGAAAACGACTTGCCGAAACATTGGATCA 18331 30 100.0 36 .............................. AAGCCTACAACACTGGTCTGGAAACCGACGCATTGC 18265 30 100.0 36 .............................. TGGCTGCACTCACGGGCATGGTTGATGAAGGATTAT 18199 30 100.0 36 .............................. TGTATCGCAGCGTCAACTCGAAGATATTTTGGTTCG 18133 30 100.0 39 .............................. GAGTTGGAAGCAGAGCAAGATACCAGCTCATTTACGAAC 18064 30 100.0 37 .............................. AGCGAAGGGCTATCCTGCGAGGAACCGCGTTAAGGAG 17997 30 100.0 36 .............................. TAATGAAAACTACCGTAAAATTGATACAGCTATTTC 17931 30 100.0 35 .............................. GCTATCGCCTGTTCAAACGTTTGGAACGTATGGGT 17866 30 100.0 36 .............................. AATTTGAAGGTGCAGGAGCAAGCGGTATCGATGTTT 17800 30 100.0 36 .............................. GGCAATGACAACACTGAAATTGTAGACGCACGAGGA 17734 30 100.0 35 .............................. TTAGGATTTTAAGGATGTAAGATAGTAACATAGAC 17669 30 100.0 35 .............................. CATATGAGCTGCTAGAGAAAGGACTAAGGTAATGT 17604 30 100.0 37 .............................. TACTCAGCATCTGCGGTACTAACGAGAGAGTCTCGAC 17537 30 100.0 36 .............................. AAAGAACTCGACAAATTCGCCAATGGGGTAAGGGAT 17471 30 100.0 36 .............................. ATTCAGTTCGACAGCCTTTTCCCTTGAAGTAGCAAC 17405 30 100.0 37 .............................. CGCCGATACGTGATCCGAAATTACTCGAAGCCAACTC 17338 30 100.0 36 .............................. ATGCAGCTCTCCGCGATGTACTGGTCAGCTTCCGTT 17272 30 96.7 35 .....................G........ CATTGTGGCAATGCTACGGGCTACACCGAGGGAGC 17207 30 100.0 34 .............................. GCCAGCGAGTTCACAAGGGAGAAGTCCAGTTTTG 17143 30 100.0 35 .............................. ATCGCTACCCAGATAATCAGAATCGGCATGACAAA 17078 30 100.0 35 .............................. AGACGAACTCTCACCTGTTCCTGTACACCACGTTG 17013 30 100.0 35 .............................. TACTATAACGAGAAAAACGAAGCTGTTATTAAGAG 16948 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 41 30 99.9 36 GTTTGACAGTAACATGAGATGTATTGAAAT # Left flank : CGTTTATGCCTTTTCTTCTTAAAGAACGGAGATGAGCGAGGATGGGGAAGAACTATAACTATGTCATTTTAGTTTATGATATCGGAGAAAAGCGTGTAGGACGCGTATTTAAAATATGCAAAAAATATCTGGTACATTTTCAGAAATCAGTGTTTCGTGGAGCGATCACACCTGCAAATTTATTGAAATTGCGAGGTGAATTGAAGAAGGAAATTGATAAAGAATCTGATTTTGTAGCGATATTCAAAATGACTGGTGACTACGTGTTTGATGAAGAGATTATTGGGGTTAGATTGAACAATTCTGAGTCTTTACTACTCTAATTTTCCCAACCTCTTTCGTTTATACAATTGAAATAGCCTTAGTGCTGCAAGGGATTAGGGCGGTTCCTGACACGTTGTAGCATTATTCACTCACGGTTGGGAAATAAATAGCGAAAGCCGCGTGGCTGTAGTAAAATTGACTTATTCAAAGACTAGAAAAGCCTGATTTTACTAGGG # Right flank : ACTTTTAAACCGCAGGTGAAGGCCTAATGTACGAAGTTTTGACTAAACGAAGGAAGAAAGGTAGAAGTACGAGGTAGAATAAAATACGGCAACCCAAAAGGTCGAGTAGAGCTTGTTAGGGCCTCCATACTCGACCTTTTAGATTTAACTTACATATGGATCACCCAAAATTGCAGCGGACAGTCCTTACTCTGAACCGTTATTCTTCTCGGATTTAGATACTTCAATAGCAGCAGCATCGACCGCTTGTTGGCCTTTTTCATCGATTAGAATTAACGCTTCATCAATGGTTAGTTTGTTGGCAATGACGTCCTCCACGATTTGGTTTCCGACACTTTTGAATGCGTTGATGATATCATAATGAACAGATTCATAAGGATTGTGATTGAATGGGGAAGCTTTAAGCATCGTCAATGGGGATAAGTCATGTCCCTTCACGGAAGGGATAAGTTCGGTTCGCGCCGGAAGTCCGTGATTGATTTCCGTGGAAGTCATAGCTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGACAGTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 29658-29099 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHY01000027.1 Paenibacillus alvei strain G25-118 G25-118_contig000027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 29657 30 100.0 35 .............................. GGGAATAGTGATATCGCTGATCCTTGTGAATCTCC 29592 30 100.0 36 .............................. AGTGTGAAGAATGGTGGGTTAGCTATTCTGGACAAC 29526 30 96.7 37 ..............C............... TATGCGCCAGTAGGACCGGCAACCGAGAAACGTTCAG 29459 30 100.0 36 .............................. TACTCCTGGATTGCTTCGGTTACCCGGATCACGAGT 29393 30 96.7 37 ....................T......... TGGTTTGTGGGGACGCATCAAGATAAATCCGAATGAC 29326 30 100.0 36 .............................. AAGTCGCGGTAACGCGTTGGCATTGCTTCAGGTGTA 29260 30 100.0 37 .............................. ACAATTGCGGGGCCGAGTTCGATCTTTTTACATCACT 29193 30 96.7 36 ........A..................... ATCGTGGAATGGATATGGGGATGTAAGGGAAAGTTG 29127 29 86.7 0 ...................A...CA-.... | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 97.4 36 GTTGAACAGTAACATTAGATGTATTGAAAT # Left flank : TGTCCGCCATCATGGCTGCAATGGCAAGCGGGCAAGTGATGAACGGAGCTGTAGATGCTGCCCATGCTGGACAGCTTGAAATGAATCTTCTCGTTTACCGTACCGCCCTGATCGGTGCGGCTGTATTTTTGCTCCTTGGCTTATGTGCCGCCTTCCGAATCCAGGACAGCGACGCCGCCGCGACCATGAAATCTCGGCAATCTTCTATTCCTGCGACGAAGCCTGTAAAGGCTGAAGGATAGAGGATAAAAGATCACGTATCTATGCCCAAATATTAGAATTTAATGCTTCAATATTCTATCTTTATTACAGAGATAGTCTGTTTTTCCCAACCGTCGTGGATAAGTGATAGAGGCAATATCCAAGTACAGTAAAGGTTTAGAACAATTTTGACGAGTTTTCAGAAAATTCCGTTTTAGGTTGGGAAAATTATAGTGAAACCCGCGTGGTTGTAGTAAAATTGCTATATTAGTGTTTTGAAAAAGCCTGATTTATCTAGG # Right flank : TAATAAAAGCGCCACCTATACTGTAGCGCATTCTCCTTTTGAAGGATATTAGTTTTAAAGTTTTATATAAAGACAAAATGATTCTTCCTAACAGTTGTAAATAGTGGTACTATAGTTATAGGAAAATCACACCATGTGTTACTGTTGATTTTAGAACATAATTTAAAGTCAAAAATTTCAATGCATCGCACGCTACAATAATGAATATTTAATTTGCTTTCATTCTATTGCTCTACTATATCGTTTCATTACTAGAGTCTGCAATAGGTAATAATATTCAATCTACTTAGGAGAGGGGAACGATATGTACTTTGAATTAAAGGCGACGGTCATGCTGAAGCAGTCGGGACATTATTTGGAATGGCCTGAGCGTATAAGTGCTTGGATAGGAAGGGCCAGCTTGCATGATCCCATGTTGAAACATTCACATTACGAAACCGCATACAAGCATTATGTGTATGGAGCACCTTATCCGAGAGAGAATGATGGAATCTACAAGC # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //