Array 1 1595-2607 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLTU01000241.1 Xanthomonas translucens pv. graminis isolate ART-Xtg9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1595 31 100.0 35 ............................... GGCTGCGGTGTGGTTGTATCAACCGGAGTTAGCGG 1661 31 100.0 36 ............................... CGGTTGTCGTCCACGAGTCGCAGTACGTCCGCAAAA 1728 31 100.0 35 ............................... TCGCTAGGGGTCACCGTGCGCAGATTCGAGATGGC 1794 31 100.0 35 ............................... TACGGCATCAACGTGATTGTTGCGGTCGGCCACAA 1860 31 100.0 34 ............................... AACGATCGTGGTGAGGTTGTGACCACACTATACG 1925 31 100.0 33 ............................... CGCTTCAGCGCCGCGCGGATGCTGGTCTCCAGG 1989 31 100.0 33 ............................... CCGCTTCCCCGCAGGGTTTTGGGCGCTTGGGGT 2053 31 100.0 33 ............................... CCGATGGAACCGCAAGCCGCCTAAGATATCCCA 2117 31 100.0 35 ............................... ATCTCTTGGGTCTCTGGGTTGGCGGGGCCGGTGTG 2183 31 100.0 34 ............................... GACTTGGCGGTTACGGATACTGCTTTGCTCAATT 2248 31 100.0 36 ............................... ATTTATGACGGAGAGCGATTTTTTCGGCGGCATGAT 2315 31 100.0 34 ............................... GCGCAAACTCTGCCGGCTCAAGCACAAGCATGTG 2380 31 100.0 34 ............................... TTTCTGGCTATCAGCTGCGCGGCCTGCAAGCGCG 2445 31 100.0 35 ............................... GGCACCAAAGATCCTTGCGGCACAAGCTTTAGCGG 2511 31 96.8 34 ....................C.......... GCGTTGGCAGTTCGTCGCGCTGGTGAGGTTTAAG 2576 31 87.1 0 .....T.........A.C.......G..... | C [2601] ========== ====== ====== ====== =============================== ==================================== ================== 16 31 99.0 34 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : TGAAAAGGCCGCCGCGCCATGATGGTTTTGGTCAGCTACGATGTCAGCACGAGCTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTTTCGGTCTTCGAAATCGAAGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCGGGCGTCGACAGCCTTCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCACGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTTGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCCGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTAAAATAAAAACATCAACCTCTTCCACTTGCTGGTATGTCCGCGGAAGCCGAATTCGATTGCGTCTCCTAAGGGTTCCGCAAAAGTGCGGACTTTTTCCCAACACCCATCAGCACTTATGCTTAGGGCG # Right flank : CTGACTTGGCGACGCTGTGTCGTTCTATCGCCTTTGCCCACAAAAAAAGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTCCCTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACCGTTCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCGGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGTTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACAGCGGTGTTGGTGGAGGAACCCTCGGTCTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAACGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //