Array 1 7221-6582 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSAW01000029.1 Lentilactobacillus parabuchneri strain FAM21838 FAM21838_scf_0029, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7220 29 96.6 32 ............................A GTTGAAAAAAGGTTGACCTATCAGCAATCGCT 7159 29 100.0 32 ............................. GGAATTTGCCAATAAGACCGGAATAGCTTTCC 7098 29 100.0 32 ............................. GACGCAATCAACTCGACACTGTCCGACAAGAA 7037 29 96.6 32 ............................T GGTAATTCGTTGGTATCATATCCCACGTTTTG 6976 29 100.0 32 ............................. TGTAAGTAGTGAATCGAAGTGCTACATAATCA 6915 29 100.0 32 ............................. GTGCCGACCACCTCGCCGTTGACTGTGACTTC 6854 29 93.1 32 ......................G.....T CTTGGACAATGACTTGATGCCTGCTTCCATAG 6793 29 100.0 32 ............................. TTGTGATTCAAAATTCTTCTTTTGCTGTCTGT 6732 29 96.6 32 ............................T AATAAATGGCAATCAGCGCAAGTTGGAAAGAT 6671 29 93.1 32 ............GG............... ATGAGCTACGACTTCAATGGTTACTACACAAA 6610 29 86.2 0 ..........T.G........A.G..... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 96.6 32 GTATTCCCCACGCATGTGGGGGTAATCCC # Left flank : GTCAAAGATAAAATCATCTCGATTGGTGCTGTCAAACAAGCTCGAACAGGTAATTATACTGACTTCTATCAGCTGGTGAAAGTTGATTCTGATATCCCGGAGAAGATCACTAAGCTGACAGGTATCACAAGTTATCAAGTGCAGACCGACGGAGTTAAATTAGAGAACGCATTGAATTCCCTGAAGGATTTTGTTGGTGATTTGCCAATCGTTGGCTATAATTTGCATTTTGATCAAGCATTTCTTTCCGCCGGGTTTCGAAAAATTCAGCAAACAGATTTAGAGAATCAGCTGATCGATTTAATGCCAATTGTCAAAAAGACCGACCAATTCCTGGATAACTATCGGTTAGAAACAGTATTGGAAAAGTATGGTGTTGCCAATGCTGCGCCACACAATTCATTATCTGATGCCAAAGCAACACTTGGACTAGCAAATAAACTAATGGAAAACGGCCATTTGGAAATTTAAGAATGCCGTCATATCAGGGATTGTTTAGT # Right flank : AGTGCGGGATGACTTTTTTGTCAGTGAGGAGTATTCCCTACATGTGTCGGGGCAGAAAAGAAGAAATGACCTTTTCTGATAAATGCTATAATAAACGGGAAAATAACTGGTTGGAGGCAGCACAATGGAATTATATGGTGGGAAGCATATTACAATCACCGCAAAAGCAGAACGAACAACGAAACGTGACCGAATTGAGTTCATTGCAGGTCTAATTTTGATAGTTGTTGCGATTATGGCGGTGAAAACATGGTAGCGTACACCGAAGCACGTAAGCGGGCAACAAAGAAATACAGGGAGAAGCATAAGGAACGTACTAACTACCTAAACAAGCGCACGATTGCCAAAACGTTCGTTACAAAATATGGAACCATTGAGGATGTAAAAGCGTTGCAAACAATGATTGATGAAAGATTGCAACAAGAAAATGAATAAGGCCACTGGTTACAGTGGGGTTCAGAAGCTTTTGTTAGGAGCAAAAACTGAGACGCCTTTTCCAA # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCATGTGGGGGTAATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5882-5608 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSAW01000030.1 Lentilactobacillus parabuchneri strain FAM21838 FAM21838_scf_0030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5881 29 100.0 32 ............................. CGAGTTGCTCGTTGCTGTTCTTCAAGCTCTTT 5820 29 100.0 32 ............................. TCTCGGAGCTTAGTTGAATCCGTAAACTCAAG 5759 29 93.1 32 ............CA............... ATTGGCGATGTAATTGCAGTGTGGTACGAAGA 5698 29 93.1 33 ............C...............C GGTGATCGGTACGTGAACCCCAAGGCGCAGAAG 5636 29 79.3 0 ............CA..C.....C....AC | ========== ====== ====== ====== ============================= ================================= ================== 5 29 93.1 32 GTATTCCCCACGTGTGTGGGGGTAATCCT # Left flank : TGATTTGTGAAAACGATGATATGGCACTGGGGGCACTGAATGCCTGTATTGAATTGGGCTATCAGGTTCCGCGTGATATTTCGATTATTGGGTTCGATGATATGGCCTACTCCAAATACTTGGTTCCACCTCTGACAACCGTCCGCAAGCCAACGCCAACCATTATCAGCATGGGTGTCTCCCAGTTGATGGCAATCGTTGAGAATGGCCAGCAGGATGACATCGAGCAAAAAGTGGTTGATCCCGAGATTATTGTGCGTAGTTCGGTGTTGAATATTAGTGCGGGTGAGTGAATGAATTGATTATGGATCTTTCTTCATAAATTATTGGTCATTGTGGTGACTGGCAATTTTGGAGAGAGGTCTTTTTTGTGAGATTTAAGGTTTAGTTTATAGTAAACTGTTAGTGTACTCGTGGTACATTTTGGGCGGGAGTAAAGAACTAATTGAAAATGGGTATTTTCAATTTTCATAATGCCTATGTAGCGGTGTTTGTTTAGT # Right flank : ACGTTGATATTATTAAAATATTGTATAGCGCAAAGGGATGCGTTTAAAAAGGCTAAATTTAAAGTTCATACAAATGGCTGGAAAGAAACACATTATGTATAATTAACGGTATTTACAGGGATTTTAGATAGTTGTTTAAGAAGGGATACCAGTTGTTATGAAAAAAGTACTCCATATCTCAAAAAGTCGTCCAGGACTCTGGCAAGATACCGATGTGACTTACGCACAGGTGCCAGGTTGGTTGGGACATACTACGATGGATTTAAAATTAACAGTTTTACGACAGTTTGAAGGACAACCACAGCCGCTGCCAGTTATTTTTTGGTTTGGTGGCGGCGGGTGGATGACTGTTGATCATAACGTTCATTTGCCGAATCTGGTTGATCTTGTTCGAGCAGGATTTGTTGTCGTCAGCGTTGAGTATCGTAATAGCAACCAAGCGCAATGGCCAGCTCAGTTGATTGACGCGAAGGCGGCTATTCGCTATATCAAGGCCAATG # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTGTGTGGGGGTAATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18188-17549 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSAW01000030.1 Lentilactobacillus parabuchneri strain FAM21838 FAM21838_scf_0030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 18187 29 86.2 32 TCCC......................... GAACCCCTCCACACTGCTAAAGACGAAAACGA 18126 29 100.0 32 ............................. AACAGAGATAAAAATATAGGAGCTAGGTTGCG 18065 29 100.0 32 ............................. TCTCCTTCACGCCATACCAAGTGTTTGGGTCT 18004 29 96.6 32 ............................T TTGATATGCTTTCAATTTAGAAGCGTTCGGCA 17943 29 96.6 32 ............................T CCGATCGATGCCGGCTTGAAGGAACTTGAAGA 17882 29 100.0 32 ............................. GACAACTAACGCAATATAAATCGGAATATCCT 17821 29 100.0 32 ............................. ATTGGTCGAATCATCAGATAACTGCCGCCAGT 17760 29 96.6 32 ............................T AACGTTGCTGCTGGTTCAATCGCATATGACGA 17699 29 100.0 32 ............................. AGGTCAAATCGATTTCGGACACAGAGCTTAGA 17638 29 93.1 32 .....T.................G..... CAATAGCCGCCTTGGTATCCGCGAATGACTTT 17577 29 72.4 0 .....T...G...C......A..G..TTT | ========== ====== ====== ====== ============================= ================================ ================== 11 29 94.7 32 GTATTCCCCACGCATGTGGGGGTAATCCC # Left flank : GGCCAAATCGGCGGCTACTCTGGCGATGTTTGGTACCCACAGCCAGCACCAAAGGATCACCCATGGCGAACAATGCCAAACGAAGCGATGACCCCACATATGTCCGGAACCACATTGTCAGCCCAAGCTCGATACGCAGCCGGCACCCGTGAAATTCTCGAAGATTTCTTGGAGGACAAACCAATCCGTCCTGAGTACTTAATTGCTCAAGGTGGCAGTTTGGCCGGTACTGGTGCCAAGTCTTACACCGTTAAGAAGGGTGAGGAGACACCAGGTAGCGGCGAGGATGAGAAGTAGGAATTCTTAAAATGAAAAAATGCGGTCTGGGAGAAGTTCTTACGGACCGTATTTTTTGTGTTTGTGTAGTGGTATTTATGAATTCTTTTATAGTAAACTGTTAGTAGGATCGTTAGAAAAAAGGTAGACCAAAATAAAAACTAATGAAAAACGAGCATTTTCTAATTTGAGAATGGCTATGTATCAGGGTTTGTTTAGTGTAT # Right flank : GCCCTCATAAGCTGGTAGCAGGCTATTCGCGTAAAGATTCATTGCTGATCGACAAAAAATCGTGATCCTGGGGGAATTTACTTCTCCTTCGAATCACGATTTTTTGTAAGTATTGAGCTGGAGTTATCCTTCAGCGTCATGAATCGCATCGGCAATATTATCAGCCGAAAAATCATGGTTCATGTATGCGTCATTACTAACCGGTAAATGTTGTTCCAGTGTATCAAACAACTGATAGGAAACGGTGCCTTTGTCTAAATGAAATGCCAACACATGGCCGCCAAACTTATGATCATCTGATAAAAAGTGGTGGTGGAAACCCGCGACCGCAGCCCCGTCAAATAATTCCGGAGAATAGTAACTAATCATTGTTCCATTCACCTGATTACGGGTAAAGATGCTTTGGGTACGCGCGGTTTCGGCTAGTGTCTGAAAAGGTGGCACGGATTTCTTAACCGCCCGAGTTTTTATTCCGGAGAAAGTGCCAGTAATTTTGATGG # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCATGTGGGGGTAATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //