Array 1 1810010-1809855 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJDI010000002.1 Streptomyces sp. I4(2020) I4_2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================================ ================== 1810009 23 100.0 38 ....................... GGCCCCCACCGGCCCGCACCCGACAACGCGCGCCCTAA 1809948 23 100.0 48 ....................... AACCCCCACGCACCCGCACGCGCGAACCGGGCGCAACCGCCTCCCCAG 1809877 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ================================================ ================== 3 23 100.0 44 GGGGCGCGGGGAACTGCGCGACC # Left flank : ACATCGCGGGCCCCGAGGAGCGCACCACGACCCGGGACCGTCTGGAGGGCCACCGGGACGCGCTGGCCGCGCACGGCATCGAGGAGGACCCGCGCTGGACCGTCCACGGACGGTACGACCGGCGCTCCGGGTACGAGGCCACGCTGGAACTCCTCCGCCGCGACCCGTCGTTGACCGCTGTAGTCGCGGCGAACGACTCCGTCGCGCTGGGCGCGTGCGCGGCGCTGCGGGAGTCGGGACGGCGCATCCCGGACGACGTGTCCGTGGCCGGCTTCGACGACCTGCCGTTCAGCGTCGACGCGGTGCCCGCGCTGACCACGGTCAGGCTCCCTCTCACGGAGGCGGGGGCGCGGGCGGGCCGCATCGCGATGGGGCGGGAGGAGCCGCCGCCGGGCGGGATCGCGTCGGTGCGGGGGGAGTTGATGGTACGGGGGTCCACGGCGGGGCCGCGGGGCTGAGGAAGGGGTGCGCTTTCGGACGCGGGGGTGTGACGCGCTCCA # Right flank : AACCCCCACCGGCCCGCACCCGGCGAACCGCCGAAGAAGCCTGCGGCACCGGAGTGACGGGGAGGAGTCGTCCCCGCGCCCCGGGGGTACTCCCGTATCCATGAAACTGGCGTTCTCCACCCTCGGTGTCCCCGGCCTCCCCCTCTCCGAGGTGACGGCCCTGGCGACCGCGCACGGCTACCACGGCGTGGAGCTGCGCGCCCACCCCGAGGAGCCCGTCCACACGGGTCTCACCGCCGAGCAGCGGGCCGACGTGGCCGCCGCGTTCAAGGCGGCCGGGCTCGACATCCTGGGGGTCGCCGGGTACGCCCGCGTCGCCGCGCCCGGCGACGACGAGCCCGTCTTCACCGAGGTCCGCGCGCTGGTCGATCTCGCGCGGGACATCGGCGCGCCCTACGTACGGGTGTTCCCCGGCGGCGGTGACGAGCAGAGCGCGGAGGAGGCCGACGCGACGGCCGCGCGGCGGCTGGGGGCGGCGGCGGAGTACGCGGCGGACCGGG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGGCGCGGGGAACTGCGCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 109759-106943 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJDI010000004.1 Streptomyces sp. I4(2020) I4_4_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================== ================== 109758 29 86.2 30 .....................G.A.CT.. GTGGGCCGGTACCGACTCCAGGCCAACCAG 109699 28 79.3 94 .A...T...............-.A.CT.. TGCGTGATTAACTCAGGGTGGCCATGCTGTCCGTCGTTCCCGCACCGGCAGGGGGTAGCTCGCGTAAGCGGCTGCGGCGTCCCCGCGGTGCTCC G,T [109695,109697] 109575 29 86.2 31 G.CG.A....................... ATCACGTGACCGAGCACGCGGTGGGCCCGGC 109515 29 89.7 28 ....A.........T.............T GCGAGCGCACGACCCTCGGCTGGTGCCA 109458 29 75.9 26 ..T..G.T......T..A.....T...T. GTCCGCGAGGATCTGGCGGTGACCGA T [109450] 109402 28 75.9 31 .CA..T..-...............AC..G CACGAGATCCGTGAGAAGGCAAGGAAGGGCA C [109387] 109342 28 86.2 32 .....TT......A-.............. TCGTTCCTGGCCGACCTCGCGCGTCGGAACGG 109282 29 93.1 32 .....................T...C... CAGTACACGTTCGGCACGACCTTCACGCCGGC 109221 29 93.1 32 ........T........A........... GGCAAGGACCAGTACCCGGCCGCCCAGTACGG 109160 29 93.1 32 .........................G..T ACCAAGACCGGCCAGGCGTGGGAGGTCGGCCT 109099 29 93.1 32 ........T...........A........ TCGTGCGGGGTAGGCTGGCGACGGCGCTGGAT 109038 29 93.1 32 .............GG.............. GCCATATGCAGCGCGAGCGCCTCGGCGCACTT 108977 29 89.7 32 ...........G....G.A.......... TCGGCGAGGACGGCGACGCCGGCGGTGCAGCC 108916 29 93.1 32 .C..........T................ GACCCGGACGTCCGGGAGTCCGCGGAGTTCGC 108855 29 82.8 31 ...................CA...AC..T GTCGAAAAGGGTGGCGGGTCCTCGAGGTGCT 108795 28 79.3 32 ......T....G.T......-....GT.. TACGAAAAGGTCCACGCCTTCCTCGTGAAGTG 108735 29 96.6 32 .................T........... CGAACTGGAGTCTGACCCATGCCCGACCCGAT 108674 29 96.6 32 .............G............... ATTGACCCGGGGCAGTCCCCGGAGGCGCCCGG 108613 29 96.6 32 ..........T.................. ACGGCCGTGCCGTTCTCGATCTCCGCGGTCGC T [108608] 108551 29 100.0 32 ............................. CACCACACCGCTGGCCGCAATGCGAAGGACGT 108490 29 96.6 32 .......T..................... CCGACCTCGATCGTGCGGCGGATGCGCTCGAG 108429 29 96.6 32 ........T.................... GGCCGGCAGTGTGGGTTCAAGCGCGGGTGCCC 108368 29 96.6 32 ........T.................... GAGGGGAGCGAGCATGTCGATGCCGACGCCGG 108307 29 96.6 32 ............................A CCGGTTCCGGCGGTGCGCGTCACGGACAGGTG A,TT [108296,108298] 108243 28 86.2 32 ....G...T.........A.-........ AGTCCGGCAAACTCGGCCGGGCCCCACTCGTT 108183 29 96.6 32 .......T..................... GCCATGGCCCACGGCGTGGCGATCAGCCACAC 108122 29 89.7 32 ..........T....A........T.... GAACCGAGGCCCAAGCCGGCATCGGTGAAGGG 108061 27 79.3 32 .......T.......A--........GT. GACCCGACGTCGGTCGGCCAGGGCGGCGGCGG 108002 28 93.1 29 ........-................A... ATGTCTTCAACGGTGTCAGGAGTCTGGAC 107945 28 79.3 32 ACC..G...C.-................. CCAGCACTCACCAGAGGACACCACCATGACGC 107885 29 96.6 32 ..........................G.. GACGTGCACAAGCTCGTCGGCACCACCAAGTC 107824 28 75.9 32 .........CG......T..-..A.AG.. GTCTCCGTGCGATCGACGTGCAGGTGCAGCCG 107764 29 96.6 35 ..........T.................. ATGCGCGAGTAGGGACCGGGGAGTCCAGTCCCCTG 107700 29 93.1 32 .................T..A........ CGGCGACTCGGGCGAAGCGACCGGAGCATTAC 107639 29 96.6 35 ...................A......... ACGCCGTCGGCGCGCAGCTGGCTGTTGGACGTCTG 107578 29 93.1 32 .............T......A........ GCGCGCGAGCTCGTGTGGCTGGCCAAGGCGAG 107517 29 93.1 32 ............A...........A.... TGTCGCTGAAGTTCCTCGCGTTTCCCCAGGAT 107456 29 89.7 32 .......T..T.......A.......... GCCGGCATCGCAGCGCGGGCGGTGTGCCGCGT 107395 29 89.7 32 ..A...A..A................... AAAGTCGACGACCTGATCGACACGATCAACGA 107334 29 93.1 32 .............T...A........... ACCGCATCGGCGATCATGCTGTGCGCGTCGGC 107273 29 93.1 32 ........T.......T............ GACGTCGTTTTCATCGAGACGACTCAGGTGTT 107212 29 100.0 32 ............................. AGGCCACCGGGTTCGTGGACGTTGCCTTCAAC 107151 29 96.6 32 .........................C... AACCCCAACCACCGGCTGACCCCCGGCGACCG 107090 29 100.0 32 ............................. GCGAACACCTTGGCGTGGCCGAGGATCACGAG 107029 29 96.6 29 .........................G... ACCCACGCTGTCACCGTCCCCGCCCGTCT A [107009] 106970 28 72.4 0 .......T.-...G..........AGGGA | ========== ====== ====== ====== ============================= ============================================================================================== ================== 46 29 90.6 33 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTGGCTCCACACCCGAACCGCCGCCCTCAACCTCCGCCGACTGATCAACCTCGGACTCACCCGCACCAACGACACCTGGCATCTCGCCACGGCCACCGCATAGCCGGAGGGGCTGTCCAGCCTCCGGCCCGGCAGCCCCTCCCCAAGATCTTCATCGGTCTTCTAGGGTCTGTCGTCAAATGATCTTCGGTAGTGGATCATGGTGGGGTGATACGTCGCGTTGAACTGTCGGTTTCCGAGGGGGAATTCGTCCGGCCACTGCTGCCCGAGTCGCTGCGAAGCAGGAAGCGGTTGGACGACCGTACGGTGCTCAACGGGATCGTGTGGAAGTTCCGTACCGGGACCGCTTGGCGGGACGTGCCGGAGCGGTACGGTTCCTGGGCCACGCTGCACACCCGCTTCCGCCGGTGGGCCAACGACGGCACCTTCGAGCGCATGCACCGGGTCGCTCAGGCCAAGGCCGACGCAGCCGGGGACATCGAGTAGCTCGTGTGGGCGTC # Right flank : AGGCGCCTCGGACAGGTCTCGCTTCTCGGGTTACCGTCGATGCAGGCGCGGGGCCTTACGCGGTCGAGGGTCGACCGCACGTGAGTCTGGGAGGACTCATGACCATAGGCCGCGTAAACGCAGCCGAGTTCATCTCGCGCTCCCTCGGCGAACCGCACGACAGTGACTTCGGCGGCGAGGAGGCCCATCAGCTCTTCAACGTTGCCCACGCCGACATCTGCTGCCCACCGATGCGGCATCGCATCAGCTGGAGCGATTGCTACGGCGGTGTCGATATGTTGCCGACGTTGAAGGCTGATCTGTTCCTAGAGTTCAACGGTGAGCCGCGGCCACTGCCGGGCCACCTGACGGATGAGCAGCGCGACCGGGCTCTCAGGGCGCAGAGGTTGGCTACACGGATCCGGCGCGAGGCCCATCGATGGAACATCCACTAACTGTCACCACATCCAGGCCCGGCTCGGCCACATGCGCGTCAGTGATCTCCCTCATTCGGCACCTAC # Questionable array : NO Score: 4.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:0, 6:0.25, 7:-0.10, 8:1, 9:0.09, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [29-51] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 124378-125440 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJDI010000004.1 Streptomyces sp. I4(2020) I4_4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 124378 29 89.7 32 ACC.......................... GTCCACGCCAGGGTCAGCGCGCAGCTGAAGAC 124439 29 100.0 32 ............................. TTCGGGCAGGCCGCGGCCAGCGTCGCCCAGTT 124500 29 96.6 32 ............................T TCCCGTCTCCGCCCGCCCGGGTGGGGTGTGGG 124561 29 100.0 32 ............................. CCGTTTGTCGCGGCGGACCCGAAGTTGACCGT 124622 29 100.0 30 ............................. CAAGCGTCGCAACGCGATGAGGCGGGCGGC 124681 28 96.6 32 ................-............ GTCAACATCGACTTCGAGGACGAGGTCGAGAA 124741 29 100.0 32 ............................. ACCCGCACCCGTAGAAGGGGGTGGTGCTGTGG 124802 29 96.6 32 ........................A.... CTCGCCATGGCCTTCGCCGACCCGTTCCTCCC 124863 29 100.0 32 ............................. TCGCCGTCGGCGTTGGCGTACACCTCTGCGCC 124924 29 100.0 32 ............................. GTCACCTACCGGATGCGGTGGATCGTCATCAA 124985 29 100.0 32 ............................. ACGGTGGAGACGAGGAAGGGGCCGGGCTGCGC 125046 29 100.0 32 ............................. CGGGAGCAGGTCCTCCGGCAGCTCGCCGAGGT 125107 29 96.6 32 ..A.......................... TCGGCGACGTCGTCCGGGTGCACGCTCCTCGG 125168 29 100.0 32 ............................. TGTGCGGGGCTGGACGGGTTGACCCCCGGGTC 125229 29 100.0 32 ............................. GAGACGAACCGGGCCGCGCACGATGCGCAGAC 125290 29 96.6 32 .....T....................... AGGATGCCCGCGCGCTGCTCGGCAGCCGCGAG 125351 29 100.0 32 ............................. CACCCGGCGCCGTCGCGCGCCTCGGGCACGGT 125412 29 96.6 0 ........................T.... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGCAACCCAGCCAACGACCTCTTCAGCGTAGGAACTCGGGTCAGGACCATCCCCGCGGGTGCGGGGAGCAGAGCTGAGGACTCGGGTCCAGCAAAGGCCAGTAGGGACCATCCCCGCGGTGCGGGGAGCAGGGCAGCCCGTTCTGCACGGTGCCGCTGGTGTTGGGACCATCCCCGCGGGTGCGGGGAGCAGATCTGCGGCAGGTTCATGCGCGCGCGGGCCTCGGGACCATCCCCGCGGGTGCGGGGAGCAGCCGGTGTCGGTCTCCAGGCACATCTCCCCGACGGGACCATCCCCGCGGGTGCGGGGAACAGACTGTTTGACATGCATGTTTACCGCTGGCGACGCGAACTTTCAGCAACTACTGCGGATTCCGGCAAATGGGACGTTGAGTAGCGATTCATGCGATAGGGCACTTCCTGGCTGGGCACGAGCGAGCCGATCAGTGTATGTCCTGGGGACGCTGCTCCCTCTGTGAACAGTCTTATCTCCTCATATTG # Right flank : CGTCAACGAGTGGGAACGGTGTGATGGGACGTCTGCGAGTACGTCAGCCGTGCAGCATGCCGCACCCCGCCGTTCTTGTCTGGACCGGCACCATACGAGGCGGAGCATGTCCGGACCCTTTGCACGCCGTCTGGACGGGTCACCAGCCTCCCCGGTCCATGCCGGGCCCAGGGGCACGGGTGGCGGTCACCGCCAGCGGCACGCTTCAGGCATCGGCCGCTCTCGGGTCTACGGAGCTGGCTCGTAGGTCACTGTCTGGGCTTGGCAGTCGGCCGCCACCCCACGCAGAGCCACTACCTCGGCATCGTCGGCCGCAAGGCGCCAGCGGAGCTTGGTGGCGACCCACTCCGCAACATAGCGGCAGTGCACCTCAGCAGCAGGGGGCAGCCACTCGGCAGGGTCCTGATCGGCCTTGGACCGGTTCGAGCGCGCGGTGACGGCCACCAGACTGGCGTCGGCGCCCTGGTCGTTGGCGTAGGCCTCACGGCGCTGCGCCGTCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1152511-1152679 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJDI010000004.1 Streptomyces sp. I4(2020) I4_4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1152511 33 100.0 35 ................................. GCACCCGCACGCACACGACGACCCGCACCACCCTC 1152579 33 97.0 35 .............................T... CGGCCCGCACGTGTGCGACAACGGCATCACCCCGA 1152647 33 97.0 0 .....................A........... | ========== ====== ====== ====== ================================= =================================== ================== 3 33 98.0 36 AGGGGCGCGGGGAACTGCGCGCCCAGCCCCCAC # Left flank : TCAGCACCACCGGGAACACGGTCTCGGTGAGCACCACCGCGTGCACCCAGATCAACGGCCACTGGGGCACCGCCTCGCTGCTCAGCGGCGGTCAGGCGAACTTCTCGCAGGGCCGCCAGGTGGCGCTGTCGGGGACGTCCTCCGGCCAGTCCGCCGCCTGGTCCAACGTCAGCGCGGGCACCTACACGGTGATCGTGGTGTGCTCCAACGGCAGCACCGCGGGCACCCAGTCCGTGGTCGTGTCCCCGGCGCCCAGTCCCTCGGCCTCCCCCACGGCGTCGCCGTCGCGCGGTGTGATGGGCGGCGTCGGCGGCGGTTCGAAGGACTACGGCACGGTCACGGCGGTGGCGGGCGGCACGCTGGTCGGCGCCGGCGTCCTCGGCACCGTGCTGTACCTGCGCCGCCGCAACACGGCCCGCCCGACCCACCTCTAGACCCGGCGCCGGCCGCCCACGTCCGAAGCGCTCCGGTAGGGCGACCGGCGTCGCCCCCGCGCCCCC # Right flank : CGCACCCGCACGCACCCGCACGCACCCGCACGCAGGCGACTACCCCTCCCGCCCCCGCACATCCAGCTCCGCGAACTCCGCCAACGCGTGATCGAGCCACTGCGTCCAGAACGTCTCCAGATCAATACCGGCCCGCAGCACAAGATGCCGCAGCCGGTCCTCCGCCCCACCCCTCCCCGGAGGGAAATCCCTCCGCTCGATCTCCCGATACGTCTCCAACTGCCGCTCATGCAGATCCCGATGACGCCGGAGATCGTCCTCCAGCCCTTCCGACCCCACCACGGCGGCGGCCCGCAGCCGCAGCAGCAGCGCGTCCCGGTGCGGCTTCGGGTCCTGGGACGCGGCCGTCCACCGGGCCAGCTCCTCCCGCCCCGCGGGCAGCACCTCGTACGCCTTCTTCTGCCCGCGCGCGGGCTGTTCCGAGGGGAGGGCCCTGATCAGGCCCTCCCCCTCCAGCTTCCCCAGCTCCCGGTAGATCTGCTGATGCGTCGCGGACCAGA # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGGGCGCGGGGAACTGCGCGCCCAGCCCCCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [15.0-21.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //