Array 1 725796-726701 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015405.2 Blautia pseudococcoides strain YL58 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 725796 33 100.0 35 ................................. GTCAGATATGCTGTCAGGCTTGTCTTTGTCTGCCT 725864 33 100.0 33 ................................. CAAGAGAAGTGTACTGCGACGAGCCAAAGCGGC 725930 33 100.0 33 ................................. TCTATCATTGCCGCCTGTATTTCTGGCGGTAAA 725996 33 100.0 34 ................................. AGATAATGCTATACAATAGCCCAGTTGAATCTTT 726063 33 100.0 35 ................................. TCAGGCATACCTGCACAAGTAATGTGTAAGATACC 726131 33 100.0 35 ................................. TGGTATATCTGTCCACCATGTGTTAGATACCCATG 726199 33 100.0 34 ................................. CGGTGAAGTGGGAAGAGTGCAGCCTGATCAGGAA 726266 33 100.0 34 ................................. ACCTGCTTTTGTAGCATTCGCCTCTGCTTTATTT 726333 33 100.0 34 ................................. GTTTCGTGTATAAAGCCATGTTCAAATAGCCAAC 726400 33 100.0 33 ................................. CATACATTCGTAACCGTAGAGCGAATCCCATTC 726466 33 97.0 34 ...........T..................... TTGCGCTATTGCAAGTACAGCTTCATGTACTAGG 726533 33 97.0 34 ............................A.... CGTTCTGGCTGCAGGCGGAACATAGTGTAATGTC 726600 33 87.9 36 ..T.........A..........A.....T... TCTTGTAAATAGGTAAATATCTGTACTCGGGCAAAC 726669 33 84.8 0 ............A........A.T..A....T. | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 97.6 34 GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Left flank : TAATGGAAAACAACCATCCACCCGTGGAGGAAGCCCAAAAGGAACCTCTTCTGCAAAAACCGGAGACGAAACGCCAATTGGCATGTTTGCGGGAGTTGGAGCACTTGCACTGATTGCTATATTAGCGTGTGTGATCAGCATTTTAAAGAAGAGAAAAAGGGCATAATCGGGAACAAAAATAGAAACTACGCTATTATGTTAAAACATTCTGGCAGTTGATTACGTTCACAACTGCCGGGCAAAAGGGAGAATGCCTTTATATCTTCCACGAAAAAGTTTTGTATAACAGGAAGAATCCTCTGTATATAGATACAGGGGATTTTTCAATGTAGATATCAGGTGCGAATGCCTAGTGAACATAAAATTCAGGGGGGATTCGCACCTATATTTTGATGGAAAAAGTGGAGTATTTGTGGTAAAATAAAATAATAGATATACAAAACTTATAATATTTATGTGAAATTCACAAAAATGGCTTATGGTTTTTGTGAAATGTTGCT # Right flank : TTTTACATATTATATGATAGTGTTCCTCCAAACTGGTCACTCTTCACAAGAACAGAATAACATTCTACCAGAGCATCTGCCGAAGACAAAGACGGCAGGTGCTCTGTTATCTTTATTTGCATAAAACAGTAAAATATTGTTATTAAGATAATTTTATTAGACTATTTGCTGAAATCTGTTATAATACCTTTTAGATGTATTAAGGAGGAAAACTATGCACAACAAACAAAAAAAGAATGCATGGATACCTTCATACGCAGTATTTCCGCTGCTTTCCTGTGTGACGGTAAATTGTATTGTATATTTTGGGATTTCCAGGATCGCCGATGAATGGAAGCATTATGACCTGACGCTGCCTGTTGACAGGGCAGTGCCTCTGATTCCCGGATTCGTATCGGTTTATCTGGGGTGCTATCTTTTTTGGATTATCAATTACATATTGATCGCGAAACAGGGTGAAGAACACTGTGTCCGTTTTGCCGCGGCAGATATTATGTCAA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3685251-3684824 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015405.2 Blautia pseudococcoides strain YL58 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3685250 32 100.0 35 ................................ CTCTTGTGTTGCTCCAGCCGTTGCCGCTGTTGACG 3685183 32 100.0 33 ................................ AATTCCGCCGGGTTTAAGAACTCTGCTGATTTC 3685118 32 100.0 34 ................................ CAAAGCAAACAATGGCCAATATAAAAGAAGGAAA 3685052 32 100.0 34 ................................ CGCAACGCAACATCCCTGGTTTGTCTCTGTCCGT 3684986 32 100.0 34 ................................ CCACCAGAACATTATTCAAGCGCTTGGAGGCCCC 3684920 32 100.0 34 ................................ TGTCTAAATAGACGGAGCATATCATATAAGCCGT 3684854 31 81.2 0 ........-................AG..CGG | ========== ====== ====== ====== ================================ =================================== ================== 7 32 97.3 34 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : GATGAATACCCACCATTTTTTTGGAAGTAGGTGAAGTGATGTTAGTATTGATTACCTATGATGTGAATACAGAGACAGACGCCGGGAAAAGACGCCTTAGAAAAGTTGCCAAACAGTGTGTGAATTACGGAAGGCGGGTACAAAACTCTGTTTTTGAATGCATCCTTGACAATACCTAGTGTGTTTCATTGAAAGCTGTGTTGGAAGATATTATTGATAAAGAAGTTGACAGCCTGAGATTTTATTATCTGGGAAATAATTATAAAACAAAAGTTGAGCATATGGGGGTCGATAAAGGAACGGCAGCTGATTCAACTTTGATTTTCTAGTGCGAATATGAAGTGAACAGAAAAACCCTGGGGGATTCGCACCGGGTTTTAGAGATAGGATGGGTGGATATGGGGATGGTATATGGGGCTAATTGGGATTGGATGATAAAATATGATTGAAATTTGAGGAAGTTGCACAAATATGTAGTGCTAGATTTGGTGGTTTTTGGT # Right flank : TAAATAAAATAATTATTTACCTCCTACCCGATTCCTAGTTGCCTTGAAAGGGTAAATTGACCATGATATTTCATTTAATCTATATTAGTAACCTTTTCCCATTTCCATTTCCACCTTCCCGTCAAATACCACCCAAACGATATCACATAATTAGCCGCCCACCCCATAGGCACAGCCATCCACGCAACCTGAATCCCATACACCGGCGCGAACACATTAGTCACGATCACCCGAATAGACAGATTCACCAGATTAGCCACTGTAAATGCTTTCACATCTCCGGCCCCCCGCAGCAGCCCGTCCGTGGAGGCTTTCAGTCCAATCAAAGCGTAAAAGAACGAAAGGAATTTCACATAATCAAGCCCTGTCTGAAAAGCGGCACTTCCATTTCCGGCATCTAAAAATGCTGAGACAAACACATTCCCAAACAACTGATAAAGAACACATATAAACGCCCCGGCGCTCAGAACCGCCGCATAGCACATCCGATATCCCTTCTT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //