Array 1 132270-131718 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBBZ010000010.1 Clostridium botulinum strain KM91-1-IwanaiiE 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 132269 30 100.0 35 .............................. TTCCATACCCCTGTGTTAAAACTCCTACACAATCA 132204 30 100.0 37 .............................. AATAGTTTGTATTGGCTTTCTGTAAGTGGCATTGATG 132137 30 100.0 35 .............................. ATTTTTTTCCATACTGACTAAAACCTGGAAAAGGT 132072 30 100.0 36 .............................. TAGACTTTGCACGTTTAATTAACTCAATTTTATCTT 132006 30 100.0 35 .............................. ATTAATTACATCTACAGGATCAATATCTCCAGTAG 131941 30 96.7 34 .......T...................... CTATAAGAGAAAGAATTAGATATACCCGTGCTTT 131877 30 100.0 35 .............................. AAAAATTAGAATTAAAAAATACGGAATTGTTATGA 131812 30 100.0 34 .............................. TACTGTCTACACCTTCTAGCTGTAATAATTACAG 131748 30 90.0 0 .................T.....G.....G | G [131720] ========== ====== ====== ====== ============================== ===================================== ================== 9 30 98.5 35 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : AGGCAGAGAAGAAGGAGAAAAAATTAAGGCGCTAGAAATAGCAAAAAATTTACTAGATATCTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAGTTAATTAGTGTTTTTTTAAAAACATTTAAGATTTAGCTATCCTTGACAAAGTATCCCATTTAAAGAGTTATAATGATTTTTTTAATTGTTATAGCTCTTTATTTTTCTCCGAAAAATAAAGATATTAAGCTCAAATTTACTTTAAGAATTGTAAAAATAAAGTAAGTTAGCTATAATATTAAGCATTCTATTTTACCAACCATAAATTTATATAAAACACCTTAATCCATTGAAATTACAGAGCTAAGGTGACCTTTAAAAATTTTTATTAAAATTTGACAAACGGCTGGGAAAGTTTCCTTCAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTTAGAGAATGAGGATTTTACTATG # Right flank : AAAAGGGCATGCTAATAACTAATAGAATGGCTGCAATGATTGGTTCATTGCAAGAATAAATATTAAAATGTATTATTGAAATTGTTTATATATAATGGGGGGAAAAAAATGACTGAAATGCAAATGTGGAATGAATATATTAAAATTAATACTAATGCAAAAGAGTATCAATCATGGTCATTTGGTGGAAATACACCTGAAATGCCAAATTTGTTGGCTGAATTAGTATTAAAGGGGATTAAAACTGCAACTGCTAGTGCATATCCTTGTTATATTGCAGAAAATGCTCCATTACCACCAGTTGGAGGATATAATTTGATATTAAATACAAAAGGTGAGGCTATTTGTATCATAGAAACTACAAAAGTATATACAATACCATTTAACCAAGTTAAGGAGGATCATGCGTATAAAGAAGGTGAATTTGATCGTACACTTATATCTTGGAGAAAATGTCATTCTAAATTTTTTTCTATGGAATTAAAAGAGATTGGTCAAGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 136403-135980 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBBZ010000010.1 Clostridium botulinum strain KM91-1-IwanaiiE 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 136402 30 100.0 36 .............................. AAGTTAGATGCTCCAATCTGTTCTCCAACTTTTAGT 136336 30 100.0 35 .............................. GATTAGAAGGAGCAAACTCAACTTGCTCCTTCTTT 136271 30 100.0 36 .............................. ACACCTTTAGGAACAATCCCAATATCAATTTTTTTT 136205 30 100.0 36 .............................. AGTATCTTCAATATTTCTATTATCTTTAATATATCT 136139 30 100.0 36 .............................. TGTCACTAATACTTTGCATATTAGTTCTTATTCCAG 136073 30 100.0 34 .............................. TAATTTATAAGCTTTTTATTTTCCATTATCATCT 136009 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 36 GATTAACCTTAACATGGGATGTATTTAAAT # Left flank : GTCGGTAGAGCACATGACTTTTAATCATGGTGTCCCGGGTTCGATTCCCGGGTGAGCCACCAAAATATTGTCCAAAGTAGAAATGTGAGTTTTTACTTTGGATTTTTTTTATTTTAGAGGAATAAAATATAATATTGATTTAGATATTTTAGATAATAAAACAATAGCAATAAAAACGGGATTAGCAGAAGAAGAAATAGAGGCTCTTAGAAAAAAAGAAAGTAATTAGTATTTTTTAGAAACACTTAGAATTTAATTATCTTAGTTTTTTTTCTGTACAATTCTATTAAAGTGTATAATTTAACTAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATGAAATCCATTAATCCATTGAAATTACTGGGCTAAGGTTGCCATTGAAAATTTTTATTGAAATTTCACAAACGGTTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTAAGAGAATGGCTATTTTACTGTG # Right flank : AGAGCATTAGATAGTATTTTTATTGCCTTTGGAGAAGGCTTAACATTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATGATATGATGCTTTTAAAGGTACCTGAGCCATTGAGGGAATTTTATAGGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGAAGCAGAACCCTTTAAAAGTGAAGGCTGGTTTTCATTTGGTGCAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGAAGATAATTATGGTAATTCCATTATTTCATGGGATCACGATATAGATGATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //