Array 1 194444-194024 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB903379.1 Corynebacterium caspium DSM 44850 A3E5DRAFT_scaffold_4.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 194443 36 100.0 28 .................................... ATCGATTTTATGGCAAATAACGCCAAAG 194379 36 100.0 28 .................................... CTAGTTCCAGCGATAGTTCGGCCTCGGT 194315 36 100.0 28 .................................... TCAAGAGAAAGCCAAGAAGATAGCTCAC 194251 36 100.0 28 .................................... CAGTACTGATTTTGAGTTAGTTAAAAAT 194187 36 100.0 28 .................................... CTGTTAGTAGTGGTGGTGCTAAAACTGA 194123 36 100.0 28 .................................... GCCCGCGTGTACTAGTACAAACTGCGGA 194059 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 7 36 100.0 28 GAAGTATATCAAAGGAAATTCGTATTAGAACCCAGC # Left flank : GGTATTTGATGCCGCAGGCAATTCTTTAAACACGTGTTTAGAGGACCTATGTCAATCGTTAGGGTTATTCGTTGAAAGAAAAATAGACACACTAAAAGTACCTACTTGGAGGTAATTGACATGCCGAAGAAAGGATCTGACCAGGTGTGGCTTTTAGTAATGTTCGACTTGCCCGTAAAAACAGTCACTCAACGAAGGAGTGCAACTAGTTTTAGAAAACACCTTCTAAAACTAGGTTTCTTCATGACCCAGCTGAGTGTTTATGTGAAATATCTGCCTGCAACGGGTCGGTCTGTGTCATTAGTAAAAAGCATAAAGCAAGCACTTCCCACAGGTGGAGTCGTTCAAATACTAAGCATTACAGACAAACAATGGTCAAAATCAATACGCTTCATACAAAAAACTGAGGTAAAAACCGAAGAAGCCCCGACGCAACTAGCAATTTTTTGACCGTAAAAAGGCTAATTTCCTTTGATCTACCTGCAGAAATATAAGTATCT # Right flank : CTGTCGGTGGCTAGAATTGATGATTGTGACCCAATTGATGGAGTACTTGATGTACTTGGAGGAGAGTTAGAGCAATGGAAATAACCTTTGAAGAGGAATTCGCTGCGGCATTGGAAAAAGCACGGAAATGTGCAGAATCTCCAAGGCATGGCGGTCTGCGTGATGTAGTGGCGGTTGATGATAAAGCGTTTGGTTTCGAGACTTTCCTAAAAGGGACGCCAGGTATCATAGGGAATTCGCATATAATTGTGGTTGATCGTCATACTGGGGTAGTACGTGGCGGGAGCAGCGCGCCAGTATTTTTCCCGTATAAGGGTAAAAAGTATTCCCTAGATGGCCGGCTATTAGAGCAATAAAACAAACTAGGGCCATAAAATAGTTATTCCATTGTGTAGCGCTACCTAGGTAGGTTAGCAATATTGGATTTAGGTAAAAGAAGAAGGCCGGCACATTGTGCCGGCCTTTAACTTGCTGCTTTAATAGCAGCGGAGCATTCGAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTATATCAAAGGAAATTCGTATTAGAACCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 203272-203042 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB903379.1 Corynebacterium caspium DSM 44850 A3E5DRAFT_scaffold_4.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================ ================== 203271 37 100.0 27 ..................................... AATCTTTATGACCAAATACGTGCTGCT 203207 37 100.0 28 ..................................... GATCATTAAGAGAGTCTGGCCAATCTAG 203142 37 100.0 27 ..................................... GGGTTTTCGCATATCCAAAACTAGCGC 203078 37 89.2 0 C................................A.CA | ========== ====== ====== ====== ===================================== ============================ ================== 4 37 97.3 28 TCAAGTATATCAGAGGAAATTTGTATTAGAACCCAGC # Left flank : ACTGCGCGAAGATAAGAAACAAAGTATTTTGCCAGAAGGATTCTTCATAACGTATTTCAATGATAAATCCAGTCGCTAGCTGTACCGAACTATCCCAAAAGGTAGCTGGCTGACGGCTGCTGGCTAAAAGATATGCGCTATAAATTCGTGAAACTTGGGATATCTGATAACTGCTATTTAAGGGTCACAGATTTGACATACCCTTATAACTTAAGGAGAAAGAAACCTAGCCATCTCCTTGTTTCTTGGCAATAAGTCGGTTAGCTGTGATGCCGAAATAAGAAAATTCGCAAATTGGCTGCATTCTCAGCAACTCCGTTACACGACTCTCAAGGCCCATATTTGTAATTAAATAGCGTTAAGCTACCTTTTGACCACATATTTTCTAGCTGATTGTTTTTAAAATTGGCTATAGACAGGTGGTTGTAGCTTGTAGAGTGCAATTTTTTTAAGCTAAAAATGGCAATTTCCTCTGATCTACCAGGGAAAATGTGATTTTC # Right flank : ATAAAATTGCAGGTAGGTAAGGGGAAACCGGTATATCAGAATGGATGATTGTTGTCTAATTGAAGAAGAATTCGCTGTTGCGTTGAAAGTAGTACGGGAATATGTGGAGCGGCCGAAGTTTGGCGGCTTGCGTGATGTTGTGAAGGTTGATGAGAAAGCGTTCGGTTTTGGATTTTCTTAAAAGGGCGAGGCCGAAAATGTTTAGGGAGTCATCGATAATTGTGGTTGATAGTGGTAAGAGACTATAGGGGGATGTGTTGTGTCACTATTCTTTTTATAACGGTAACGAGGTATTTGTTAGATAGTCGCTTTCTTAGGGTGGTGGAAGCGAAGCTTTCGGTGAGATAGTCAGAATTAAAACTCGTTACAACTTTTTGTGAGTACAAAATTAGCGATGAAAACATTGATTTGCGGCGAGTAGGGGGTAATCACATATCAGAGAGGATTTGTCCACAGATAACGTCTTAAAATTGCAGCGAATACTTCGCGTACACCATTTA # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.10, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAAGTATATCAGAGGAAATTTGTATTAGAACCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //