Array 1 274035-273392 **** Predicted by CRISPRDetect 2.4 *** >NZ_FVAP01000004.1 Mycobacteroides abscessus subsp. massiliense strain 197, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 274034 28 96.4 34 C........................... CGACTGGTTGATGTGCTCGGGGATGTACGACCTC 273972 28 100.0 34 ............................ CGTGTAGGCACCGGATCGTTGCTCCGCCAGGCCG 273910 28 100.0 33 ............................ GATCAAGGAGATCGAGCGGCAGCTCGCGCAGAT 273849 28 100.0 33 ............................ GCCTGCCGTACCCCAGTCGGCACTGGCATCGCC 273788 28 100.0 33 ............................ CGGCACCGACGCGGAGGAGTTGACCGCCGCGGT 273727 28 100.0 34 ............................ GCCGGCACGAGTGCAAGACGCCCTCGCTGCGTAC 273665 28 100.0 33 ............................ CCCGTCTGACCTACCCCGGAAACGAAGAAACCC 273604 28 100.0 35 ............................ GCGCTGGTGTCACCCTGGTAGGTACTGGCGATCAC 273541 28 100.0 33 ............................ GGACGTCCAAGCCGAGGTGCCGGAGCTCGATCA 273480 28 92.9 33 C............G.............. GATCGCGCCGCAGGACATCTCCGATGACGCGCA 273419 28 96.4 0 ..............G............. | ========== ====== ====== ====== ============================ =================================== ================== 11 28 98.7 34 ATGCTCCCCGCGCAAGCGGGGATGAACC # Left flank : CCACGACCGGTTGGCCGCCGACCGAAGTCGAGCACGCCGAGAGCACCACCGCGGCGGCGATGCCGGCGGCTGCTCCAAGGCGCGTCGTGCTGCTCATACGTTCGATTCTCCCAGAAGACACCGAACAACCCGCCGATGCGCGTGTCACGTCCCCCATCCGGATGCCTTGAGCGCGCGCGGGATTCATCGGTCGGCCAGCTCTGCGAGGCGCTGCTCCACGGCATGGAGGTCGGCCACTGCGGCGGTGAGCTTCGCCTGTTCCAGGAGCTCGATCACGCCGTGCAGTCGGGTGCGGGCTCCTGCGACGTCGTCGTGGACCGAGTCCGTCAGGTTGGTGATCAGCGGTCGGTAGTCGGTGCTCATGCTCGGCACGGTGACACGGCACCGCGGCGAGGTGATGTACGCGGCGCGGGTGATGGCGGGGTACCGGAGGTGAGATCGTTAGCAAGGCACAGGTGTCAAACTGGGCATTCGGGCTGTAACATCCCAGGTCAGGAAGT # Right flank : CCCTTGACGACGCAGAGCTGGCGACGCATTGCCTACTGCTCCCCGCGTGAGCGGGTGGGGGTTCCCTCGACAAAGTGCGCCTGCAAACGTGCCGCGTTCATTGGCTTCTCGATGCTGTGCAGTAGGAACCGTTGCGCTGCAGAGGGTTCGGGAAAAGTTGGAACAACATTTCTGATTCTGTCCCAGCCTCGTCGCTGACCAGCGGACTCTCGATTATCGAGACGGATTTCGGGTCTGATCAGGCACGATCCGGCGGCTTCGTTTCCGATGTGTGTCCAATGTGACTGCTACAACTGGAGCCAGCTTCCCCAACCTGACCAGCCAACCGGAGGAGAGACGATGACCACCACCACCACCCGTATCCGCATCGGAACGCCAGCTGTCGCCGAGCAGCTCGGCGTGTCAGACGAGACCGTTCGCCAGGAAATCCAGCGCGGCCGCCTGCCCGCGATCCGCGTCGGCAGAACCTACCGCGTGCTCCAGAGCGACGTCGACGAGTA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCTCCCCGCGCAAGCGGGGATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.90,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //