Array 1 597250-595563 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046328.1 Streptococcus gordonii strain FDAARGOS_683 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 597249 36 100.0 30 .................................... GGATTGTCATCTGGTCGTACATAAGTCACA 597183 36 100.0 30 .................................... TCAGCTTTATCAACTTCACCTTCACCGTAT 597117 36 100.0 30 .................................... TCCTTGAGCAAAGCGAATTGAAACGACTCT 597051 36 100.0 30 .................................... CATTCAGATAGCCTTCAAATTTAGTCCCGA 596985 36 100.0 30 .................................... AAGTCTATCAAGAGCAAGCTAACGAAATGC 596919 36 100.0 30 .................................... ATGTTATTGATGTAGATGAGATGATGGCAG 596853 36 100.0 30 .................................... ACAGGGTAGTCGTGACCTTCTTCTAGGTTG 596787 36 100.0 30 .................................... TAACCAGCGTTTTTCTGCCATCTCCTGGTC 596721 36 100.0 30 .................................... CAAACTAGAAAGTGGCCTGCTCATTTCATT 596655 36 100.0 30 .................................... TCGTAGGTTTGGTATTTTATGTTACGATTA 596589 36 100.0 30 .................................... CCGTAATTGTACGATTATTACAAGCAATCT 596523 36 100.0 30 .................................... GGATATGTTTTAAAGGTGATAATAAATTGT 596457 36 100.0 30 .................................... CACAATCCATTTTACATTTTATGCGTAAAT 596391 36 100.0 30 .................................... CTTTCTTACCATGCTATACTAGAACCATAA 596325 36 100.0 30 .................................... TCAATATCATCAAGTAAGATAGCGTTGATA 596259 36 100.0 31 .................................... CATTGTTTGAGGGTCTACAGTAGTAGTAGTG 596192 36 100.0 29 .................................... CGTAAACGGTAACCGCTTTGACTTCCTCG 596127 36 100.0 30 .................................... TACAAACCCTTGAATCTGACCTCGGACTTG 596061 36 100.0 30 .................................... TATTCACAAAGTTGTTGTATTCTTCTTTGT 595995 36 100.0 30 .................................... CACATATGTATATTGATGGCTTCGAGTATC 595929 36 100.0 30 .................................... GTCGGTGATAGTATGCCCGATTATTTAAAA 595863 36 100.0 30 .................................... AAAACCTCTCCTACCTATTCCATCGACCTT 595797 36 100.0 30 .................................... CCATTCCATTCATGGTTTTTGTTTCTTTGT 595731 36 100.0 31 .................................... TAGGACCTTCAAGCACAATCACATCAAATGG 595664 36 100.0 30 .................................... TAGTTGTAGACATGAAGTCTAAGCAGTTCA 595598 36 80.6 0 .........................G.G..ATT.GG | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 99.3 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TGGACGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTGTTTCCTTCAAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTTCATATGAGTTTATCAATAGAGGATCAAGTAGTATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCAGTATTAAATTAGTCAATCCAATGTTATTAAAATATTTGGAAGAATAGTATTGACGAGTGAGTTTTAAGGCTTTATAATGTTTTTGAGATACAGAAACCAAAATTGACGAATTTGAG # Right flank : TTATGCTATACGAATTTATCCAAAAAACAACCACCTAAATAGGTGGTTGTTTCAGTATCTATCATTGCTTACTAGAAGAAGAACTTGAGTTGCTTGAGCTGTCGCTACTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTGCGTTGGCTGTAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAAGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTCGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGGGTATTGGCAGCATTACGAATGTCATCCAGTTCTTTCTTGATGGTTTCGTCTGGATTGGTAATTTCCTCACCGGTTTGAGTGTAGTAAGTCCGTCCGTTGAAGCTAGTGTATTTTGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //