Array 1 69037-65955 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABRWP010000011.1 Winogradskyella eckloniae strain EC29 NODE_11_length_121762_cov_45.138357, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 69036 46 78.3 30 A..T...G..T.A........CG.........G...A......T.. TTTATTGTTTTGATTTATGGTGCTTGCACA AGG [69021] 68957 46 97.8 30 .................A............................ TTTTGACATGTTTTAGTTTTCGTTATTTGT 68881 46 100.0 30 .............................................. TTGAGTGGATGAATAATACTACGACGTTAA 68805 46 100.0 29 .............................................. GCGAACTCTAAAAAGTTTCATCGTGTAGA 68730 46 100.0 30 .............................................. CTTTCTTCGCCTAGTATGTTTGATATTGCT 68654 46 100.0 30 .............................................. ATAAAACAGAATATAATGAATACAGAGGTC 68578 46 100.0 29 .............................................. CCATCTCTGCTGGAGTTTGTTCCATTTCT 68503 46 100.0 29 .............................................. TTTATAGATAGTAGCCCTTTATCAAGTCT 68428 46 100.0 30 .............................................. TAACGCTGTAATAATTCGTTTACAGTACCG 68352 46 100.0 30 .............................................. TAAGTGAAAAAGACAGCGAGTTCAAAACGT 68276 46 100.0 30 .............................................. AACCCACAACAGCGAATTAATTTCACGTAA 68200 46 100.0 30 .............................................. TTTTCCTGTACTGAAATAAAAGGATTATCT 68124 46 100.0 30 .............................................. ACCTAATCCTTTACAGTAATAGTCGTTTCT 68048 46 100.0 30 .............................................. GTTGTTAAGGTAAATTATGTAAGTTATCAC 67972 46 100.0 30 .............................................. AAAAACTTACCATCAACATATATTCTAATT 67896 46 100.0 30 .............................................. CAATAACACTATCTTAGATAAGCAGTTAGA 67820 46 100.0 29 .............................................. TAGTTTCAATTATAACGTTTTCATTTCTA 67745 46 100.0 30 .............................................. TAACGCTGTAATAATTCGTTTACAGTACCG 67669 46 100.0 30 .............................................. TGATGGCTTGACTGTTTATTTGGAAGCGGC 67593 46 100.0 30 .............................................. GAAGACATTAACGAAAACGACGACGAAACA 67517 46 100.0 30 .............................................. ACAATGAAGGCTGTCTAAAACACTTACCGT 67441 46 100.0 30 .............................................. CATAACCAACCAAATCAAACTGCGTGTCTG 67365 46 100.0 30 .............................................. CATAAGACTGTTTTAGTGCTAGGCACACCA 67289 46 100.0 30 .............................................. GTTAGATTGTGGTGTTATTAAAGGTAATGT 67213 46 100.0 30 .............................................. TACAAATACTCACTAAGCAATATAGCACTT 67137 46 100.0 30 .............................................. GATGATACTGGTGTTATAGTTGTTAATAAT 67061 46 100.0 30 .............................................. GTAAGAAGAAAAATGAGTGCAAAAATAATA 66985 46 100.0 30 .............................................. AAATTTCATATACTACCTATGCAGATTGTA 66909 46 100.0 30 .............................................. TCTATCATTTTGTTTAGTTTAATGCTTTGT 66833 46 100.0 30 .............................................. TTTTAATAAATCCGTTTGCATCTTTATTTT 66757 46 100.0 29 .............................................. TGTCTATGTAGACGCTTAGTCCGTAGCCT 66682 46 100.0 30 .............................................. ACATCACTAAACTAGAACAACGTATAGAGG 66606 46 100.0 30 .............................................. GTTTGAGAACGATTTAATTAACAGGAAGTA 66530 46 100.0 29 .............................................. AGGCACGTAAAAACGACCCGACAAGCATA 66455 46 100.0 30 .............................................. AACCCACAACAGCGAATTAATTTCCCGTAA 66379 46 100.0 29 .............................................. CAAACAAACAATAACAATTAAAAATGTAA 66304 46 100.0 30 .............................................. GGAGTATTAAAAAATGTAACAAAGGGTAAA 66228 46 100.0 30 .............................................. TCAACAATAAAAAGCTTCGCGACAGTCATA 66152 46 100.0 30 .............................................. AAACAAGAAGTAAAACAAATAACAACAGGC 66076 46 100.0 30 .............................................. AGGAAAATAACCGTTCATAAAACCGTTTCC 66000 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 41 46 99.4 30 GTTGTGAATTGCTTTCAGTTCATTAATTTTATTGATGATTCACAGG # Left flank : CAACAAATTTTTCAAGTACAATATAACTTGGGCCATTACTTTCCTTACATTTTTGCCAGTTTAGCGATTACTATTGGATTGGCTACATTTTTAAATAGTGCCATAGTTATGCGTTTTGGGATGTGGAATTTAGTAAATATTGCGCTATTGGCATTTGTTAGTATTTCCTTACTATATGTTATTTTATTTTGGTCTGGCGATAACCCAAGTATAGGATTATTAATTGTATTTTTAATTTTACAATTTACAAGTGTAGCGTTCTTATTTGGTAATTATAGAGCTTTGGCTATGCAGCCCTTAGGACATATTGCTGGCATAGGTTCTGCGCTCAACGGATTTATTTCTACCATAATGGCTGTACCTATTGCATATTATATAGGTACGTTTATAACAACCTCAGTATTACCTCTTTTTATGGGCTTCTTTATTACTGGCGTTATTGGCTTGTTTTTATTTTATAGTGTAAAAAAGCCAGTGAGGGCATAATAAAATGTTCTTTA # Right flank : ATACTTGCTGTAACAGGCTGGTATCCTGTTTTTTATATATAAGCTTAGAATTTGCATAATTCTTGTTTTTTATAACAGACTTATTTATCTTCTATTCATTTTTTCAATTCAAATAATAAAACGTCAGTTTAATTGCTTTAATGCATTCCACTATTTTTTAATGGAATTCGATGAATCTCGTTTAATCGATTTAAGTGTGTTAATTGCTGCCTTAATCAAAGTCGAAAGGTAATTGATTATTCTCAGGACACTTGCTGTAGCCTGTTTTTCATGGCACTGTTTAAACATTACAAAAAAACACCCCTAAAGTCCCCTCAAGGGGACAATCTATAGATTAAAACAATTCTAGTTGCTGGCTTGGTGGTTCTGGTTCGATTTCCGTTTGGCCGTGAAAGAGTTCCATCATCCCAAATTGTTTGTCTGTTATTTGCATAATACACACCTTCCCTTTTTTTGGCAAAGCATTTTTGGTGCGTTTTATATGCACTGAGGCATTTTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCATTAATTTTATTGATGATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.10,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //