Array 1 2430662-2428012 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBVW01000002.1 Klebsiella pneumoniae subsp. pneumoniae strain YmcD2 scf7180000000010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2430661 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 2430600 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 2430539 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 2430478 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 2430416 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 2430355 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 2430294 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 2430233 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 2430172 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 2430111 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 2430050 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 2429989 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 2429928 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 2429867 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 2429806 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 2429745 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 2429684 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 2429623 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 2429562 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 2429501 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 2429440 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 2429379 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 2429318 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 2429257 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 2429196 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 2429135 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 2429074 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 2429013 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 2428952 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 2428891 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 2428830 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 2428769 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 2428708 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 2428647 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 2428586 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2428525 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2428464 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2428403 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 2428342 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 2428281 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2428220 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 2428159 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 2428098 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 2428040 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //