Array 1 61144-61388 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNEH01000011.1 Pseudoalteromonas piscicida strain S2047 S2047_S23_L001_R1_001__paired__contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 61144 35 100.0 35 ................................... CCATTATTCCAACCCAAAGATAGGGTTTGTCCTTT 61214 35 100.0 35 ................................... CCTCTTGCGCAAGAGTTGCGCAAAATAAAAATAAA 61284 35 100.0 35 ................................... CCATGGGTTGCGAAGTTAGCTGCCATACTTTCTCG 61354 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =================================== ================== 4 35 100.0 35 GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAAC # Left flank : AGATTTAGCAAAAAATGAGATCTACCAAATAAATTTGTGAAGCTTGTCATTTGTAGGTCGTGATTTATCACGACACAGAATTTCCGCCGCTTAAGGTGCGATATAAAAACCAAAAAGATCGCGGGGTGAACCCACTTTTACTCGCTATAAGTAAACGCCATTTCAATAATCTTGTACCTTTTATTTTAGGGTGCGTTTTTAACACTTTTTTTGAGGAACTTATACAAAGAAACAAAGGGTTATAAGCAAAAGTTGCTACTGTTCTGGATGAACCTATTCCCTAATTTAGGGATTTTTTAAAAATACTATAAATATCATACTGTTAGCTTAAAAAGCCGCCTTTAGGTTCATCCAGTTCAATTAAATCAATAAGTTAGCCTAACTTTTTACTTTCAAAATGGCTGTTTTTTGCTAAAATCAACGCAGTTTCTTGATTAACGCTGGAGGTTCATCCAATTAGCCGCTACAGGCCACGCCAGTCAAGGGCTACAGAAGGTAGG # Right flank : CTTTGGTTTTGTGTTTTTGCTAATCATTTTTTGGTTGCAGCAACAAAAGATCGCGGGGTTCACCCGCTTCTACTCGATAGGGGCTAAGCGCTGGGGGTGAGTTGACTACCAAACCATAAAACGAATCGCAATGAGGACATACACTGCCCTCTATTATTCATATTCACACCCTTCCAACGCTAACAGTCTAAAAAGTTAAAACACGACAAAAGATAACAAAAAAAACAATTTGGCAACAAAGCATTCCAAACAAACACAAATTACTTTATGCTGATTGTTAAGGATAGATTCATCACACAAGGACACCTATGTTTGTTGCACAAATCGAATTTAAGCGAATTCAAACTTTTTTGTTTTCTTCCTCTCGTCTGCACGATATGGTTGCCGCCAATGCTTTACTTGCTAAGACTATTCGCTACGATCTGGTTGTCGCCGCCATAGCAATAGAAAAAGCCATACTCCCAGACAAAACGCTCCTGTGCGGCAACGACTCAGACGCA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 73938-74752 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNEH01000011.1 Pseudoalteromonas piscicida strain S2047 S2047_S23_L001_R1_001__paired__contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 73938 35 100.0 35 ................................... AAGAACATAAAAGTAGAATAGTTATAAGTTTAAAT 74008 35 100.0 38 ................................... ACTATTTCACTTCTTTGCGGGCGTAGGCGGTCATACTA 74081 35 100.0 34 ................................... ATATGTATTTAACGATTGAAGAATGGTCATGATT 74150 35 100.0 35 ................................... CTTTTGAGTTTGATTTAATAAGCATTTTTGTTCTC 74220 35 100.0 34 ................................... CCTTTTGTCCATATACTTGCATCATCATTGCTGG 74289 35 100.0 35 ................................... AGATCAATGGCATAACGCTGGATCAACTTTTCTTC 74359 35 100.0 36 ................................... TCATATTAAATATCCTGTAGTTGGAAACTTCATTAG 74430 35 100.0 35 ................................... CCATACTGATTAAAACGCATGAACTAAATTGTTTA 74500 35 100.0 43 ................................... ACTAATCCGCCTTTGTGATATTCAAACGTTGCCTTGTGGAAAA 74578 35 97.1 35 ........G.......................... ACAACATCGGCATTGTATGCGTCTTGTGCGTACAA 74648 35 100.0 35 ................................... AGATTTTGCTCTGCTTTTGCTAAGAGAGATATTTT 74718 34 94.3 0 ..............................-..T. | C [74746] ========== ====== ====== ====== =================================== =========================================== ================== 12 35 99.3 36 GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAAC # Left flank : CGACTGCTTTGAGTGTGGTTGTCGTTGAAGCAGTAGAAACGAATTTGTTTTTTCTAGGAGACCATTTATCTTTAAGTTGCAGTAACATTTGCCGTAGAGGCAGCTAAATCACAAAAGATCGCGGGGTGAACCCGCTCCTACTCGGTATGAGTAAACACCATATTAAAAATCTTGTACCTTTTATTTTAGGGTGCGTTCTTATCACTTTTTTTGAGGGTTTTATTCTAAGAAACAACGGGTTATAAGAAAAAGTTGCTACCGTTCTGGATTAACCTATTTCCTAATTTAGGGATTTTTTAAAAATACTATAAATATCATACTGTTAGCTTAAAAATACGCCATTTGGTTCATCCAGTTCAATTAAATCAATAAGTTAGCCTAACTTTTCACTTCCAAAATGGCTGTTTTTTGCTAAAATCAACACTGTTTCTTGATTGGCGCTGGAGGTTCATCCAATTAGCCGCTATAGGCCACGCCAGTCAAGGGCTACAGAAGGTAGG # Right flank : CAACAAGATCGCGGGATGAACCCGCTCCTACTCGATTAATATGATTGGAGCGGTTTTAACTAAGCGAAAGGAAGTTGCTAGCGGTGGCTAGCAACGTGTGATTAGACCGAGACTGGCTAAAACCACATTTTATGTCCCCAACCAAATATACAAATAATCCCAAATATCAGTAAAATAAGTGACAAGCGACTGCCCTTAGGTTGGCTTTGTGTTTGGTGTGTGACACTGGCTTTTCGCGCAATTTGTTTGTAAGCACTAAGATTTGAATAATAAACAAAAGCAGAGGTCGTGAGCATCACCAAACCAATAAATACCGCATGCCAATCACTCGAGAAAAACCGAATTGGCTCACCATAATATAGCGTGGTCATTTCTACAAAGTTAGTGCCAAACACGCTGGCAATAAAAATAAGTGCGGTGCCTAACGTGGCGATGTTTTTTATCTTATTTTGATGCTGCTGTTGTTGCTCCCGTAGCTGCTTGGCTTCTTGTTCCATTTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 77577-77261 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNEH01000011.1 Pseudoalteromonas piscicida strain S2047 S2047_S23_L001_R1_001__paired__contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 77576 29 100.0 44 ............................. ACTGAGTATGTCACAAAAGAATTACCTGAAAGCACATAGTTTCT 77503 29 100.0 43 ............................. AAACAAATCAAAAACACATCCTAAAATACACCAAGATGTTTCT 77431 29 100.0 42 ............................. CTTTCGTTTAACGATAGCGGAAACGTAATCGCAATTGTTTCT 77360 29 100.0 42 ............................. TGAATTCTAATCAAGAGTTACTTTGTATGAGTCATAGTTTCT 77289 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================ ================== 5 29 100.0 43 ACTGCCTCTACGGCAAATGTTGCTGCAAC # Left flank : GCTGGTTGACTACCAACGACTAATCGTTGTAGTTGTTGACAGAGGCGCAGGGATGGAAGAAGAAAAGCTAGCAAACGCAGTACTGCCATTCTTTTCTACTAAACCCAGTGGCACAGGCATAGGACTTAGTATTTGTAATGAAGTTGCCATTGCCCACGGTGGACAACTTAAGCTATTTAATCGCGAAAAGGGCGGACTAATGGTGCAGTTTGATCTGCCTCTCGTTGCACCTAAAGCATAGCGTTGTTATTGCACTAACCCATATCGGGTAGGAGCGGGTTCACCCAGCGATCTTTGGGTTTTAATGCAATACATTGTGCGGTGGAAATCTTTTTGTCGTGATAAATCACGACCTACAAATAACGAGCTTCATAGGTTTATCCTGTAGGTCTTGCTTTTTTGTTAATCTAGGGTGCTCACGAGGGCTTTTTAACGCTGTGTAACGTCTTAAACACCAATCATCATTTCTAGGTAGCGATAAACAATGCACCTAACCTCAC # Right flank : CCTACCTTCTGTAGCCCTTGATTGGCGTGGCCTGTAGCGGCTAATTGGATGAACCTCCAGCGCCAATCAAGAAACTGTGTTGATTTTAGCAAAAAACAGCCATTTTGAAAGTAAAAAGTTAGGCTAACTTATTGATTTAATTGAACTGGATGAACCTAAAGGCGGCTTTTAAAGCTAACGGCATGATATTTATAGTATTTTTAAAAAATCCCTAAATTAGGGAATAGGTTCATCCAGAACCGTATTACCTTTTATTTTTTAAATTATTGTTTTATTTGCAAAATACGTACAAATATAAGACTTAAAACAAGCGAGGTTTTTTTGAGTCATTGGCTTTTGTGAATATCACTTTACCTTCTTCAAGAACTTACCTATTCTGCTAACTCAATTAACATGATGCAAGGAGCCAGTACTCGATGGAGTTAAATCAAGAAGCAATCACCAGCTATCTTAACGAGCTGCTATCAGACTCACATTCAGACTTACTCAAAAGTGCAACC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTGCCTCTACGGCAAATGTTGCTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //