Array 1 707235-707023 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACMSJ010000001.1 Streptomyces sp. CBG9 tig00000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 707234 29 96.6 32 .................T........... ACGGGCCTGCACGACGGGGAACTCGCGCAGAC 707173 29 100.0 32 ............................. GCCTCTACGTGGGTCCTGGGGACCGTCACAGA 707112 29 100.0 32 ............................. GTCAGTCAGGTCCGCAAGGACCGTGTCGGCTC 707051 29 96.6 0 C............................ | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : GGCACCCACCCCCGCGTCGTCCCCGCCCACCACAGAACCCCTCCCCGTAGCCCGGTCTGCCGCTGCGGGTCACCTTAGAGGACGGGGGGTTGGGCGTCTTGGGGGTGAGGGGGTGGGGGTGGTGTGGGCGGCTGGTACGGGGGTGGGGCTTCGGGGGGTGTGGGCGGGGGGTGTTCGGGTGCGTTGGGGTGGGGCGCCGAGTGGTTCGGGGGAGGAGGGGGCGTGGCGGGGCTGGAGTTGACGCGGGGCGTTGTCCTGCTCCGATCCGCAGGAGCTACTGGGCGAGCCTGCTCGGAAGTTGGGGGCTTGGTTTCACTTGGGTGCGACGTTGCTGGGGGGTGCGCTCGAGAAGGCGGAGTCAGGTGGGGGGAACTGGGGGAGGATGGGCGGGGCTGATGGATCGAGAGGGGGGTGTTATGCGTCTTTCGCACGAAAGGCCGGAATCGGCGAAGCTTGCGGGAACGGGTGGCGGCGCCGGGTAAAGGCGCAGGCCATGGAGA # Right flank : AAGGGCATCGTCCGGCTGTGGAACCTCGCAGCGTGCTCCCCGCGCCCGCAGGGCAACTCACCCGGCCTCCCCAGCTCTGCCCACGCCCCCTCACGGCTCGCAAACCCCACCCTCCACAGCAGCCCCCTCCTCGCCCGCGAAAAACCCCACAACCCGCTCCGCGCACCCCCCACCAGCCATCCCTCCATGTTCCCCGTCCCCCACCACCAACAACGACCCCCCAGTCCGCGCCCGCATCGCACGGGCCCAGGGCAACGGCGTGATCACCTCGTCCCTGTGGGCGACCAGCAGCAAAGGCCCGTCCGCCCGGCCCGGTTCCACAGGCGGCCGCTCCGGAGCCGGCAGGCCCGCGCACGTGCTGGTTCCCGGGACCTCGCCGCTGCCCGGGAACATCGGGCGGGTCGCGCCCAGTACCGGGTAGGCGGTGCGGCGTTCGCCGTAGGCCGACCACTGTTCCGTGAACGAGGCGGCGTGGGTCACCTGGGAGCAGAGCAGTGCGG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1102263-1102474 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACMSJ010000001.1 Streptomyces sp. CBG9 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1102263 29 100.0 32 ............................. CGAGCGTCGACCCGTTCCGCGAGCCGGTCTAC 1102324 29 100.0 32 ............................. GCGGTGGACAGCTCGAACGCGGCCGCGAAGAG 1102385 29 96.6 32 .........................C... GAGGCCGCTCCGGTCGTCACGAACATCATCGA 1102446 29 79.3 0 .............AG......CAA.C... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GAAGCACCACACCCCGCAGCCCGCTACGCCACCGGCAAAGTCCGGTACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCGGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTACGTCGTGTCCTTCCAGAGCCGACCGTGGATGTCCGTGTGGCAGGCCCGATCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGATGCGCGGGGGGCCGGGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGGGCTCAAGGCTAGATGGGCATTTTGGGGCGAATGTCGCTATCGGTGGAGCTTGCGGAAACTGGGGCAGGGGCGCCGTAAACCTGCTGGTCAGGGAGA # Right flank : CACCCCGCCTCACCCCGACCCGGCGCCCAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCGGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCTACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGTGGGAGTGCGCGCGGGCTGGCCAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCCTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2887976-2888184 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACMSJ010000001.1 Streptomyces sp. CBG9 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ===================================== ================== 2887976 25 96.0 36 .................T....... CCCCGACATGGACGCCGTCCTCGCGCAGCTCGGCGG 2888037 25 100.0 37 ......................... CCCCGGTGTCGGCTCCGACGTGGTCCTGTCCGTGGAC 2888099 25 100.0 36 ......................... CCCCGTTCGTACAACCCCCCGGAGTTGACTGTGCCT 2888160 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ===================================== ================== 4 25 99.0 37 GTGCTCCCCGCGTGTGCGGGGGTGG # Left flank : AGGGTGCCCTTGTCGACCAGGTCTTGGAGGGCGGAGAGGGTGGCTTGGTGGTGGGAGGTATCTGGCTGGGCTGTGGGGGAGGCGGGCGTGGTCGAGGTGGCGGCTGGGCTGGCGGTCGGGTGGTTGGCTGGGGCGGCGGAGGCCGGGCTCAGGGCTGCTGCCCCGGTGGCCAGGGCTATGGACAGGGTTAAGGCGAGGGCGCGGGTGGGGTGTTGGGGCATGGGGCATCTCCTGGTCGGGGAGGGGCGGGGTGCCTCTCGGGGACCAGAACGCTTGGGGGTGGGTGGGGGGTTGACTGGGGTTGTTGTGGCGGGGGAGGGGGCTGGGGTTGCTTTGTCGGTCTCTTGCTGGGTTGCGGTGGGGGTGTTGGGGGGAGGATGCGCGGGGTTCTAGAGGGGATCGAGGGGGAGGGTGATATGCGGCGTTCAGGTGAATTGCCGGAATCTGACAAGCTTGCAGAGACGGGGTGTGGGGGCCGGTAACGCCGCAGGTCATGGAGG # Right flank : GCCCTGGTCCGGGTTGCTTGATGACCGTTATTTAGTGTGCCGCCCGCCCAGGCGGGCCCCCCTTCGAGTGATCCCCCACCCCCCAAGTGCATCCCCCCACCCCCCGGGCAGCCTCCTCCAGGGAGTTCGTCCACCCGAGAGGAAGCACCGCGTGGGACTGTCACGGAAGTACGGAACCGCTATCACCGAAGGGCCGACCCCGGCCGATGTCGCCGGGCAGGCTGCCCTGCCCTATCCCGACGGGTGGGCTGCCGTGGCCTTCTCGGAGGAGTTGACGAGAGGGAAGGTGCTCACCCGGCCGCTCGCCGGGGAGGATGTCGTGCTGTACCGGCTCGGGACCGGTGCTCTGCGGGCCGTGAAGCCTTACTGTCCCCACCTCGGCGCCCATCTGGGGCTCGGCAGGGTCGACGGGGAGGACCTGGTCTGTCCCTTTCACCTCTTCGCGTTCGGGCCCGACGGGGCCTGTGTGCGGACCGGGTACGAGACGGCGCCGCCCCGGT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGGTGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 631603-631348 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACMSJ010000004.1 Streptomyces sp. CBG9 tig00000036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 631602 37 100.0 36 ..................................... TCGCAGTCAATGCAGTCGTGCAGAACTGCCCCCTGC 631529 37 100.0 34 ..................................... CGCGCGGAGCACGGCCGCGAGCCGGTCGGCAACG 631458 37 100.0 37 ..................................... CTCGGAGGGCTCGTGCTCGAACAGAGCGCGGGCGGCC 631384 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 100.0 36 GTGGCGGTCGTCCTCCGGGGCGACCGAGGATCGCAAC # Left flank : ACCACCGGATGACCACCCCACACACCAGCCCAGGCGGAGAGCGCGAACTCACCCAGATCACGCTCTCCGCCCTGGAGCACCACGCTTACTGCCCACGCCAGTGCGGCCTCATCCTGCTCGAAGACGCCTTCACCGACGATGCCGCCACGATCCGCGGCACCCACCTGCACCAACGCGTCGACACCCCAGGCAACAAAGGACGCGGCACCATCCGCACCCTGCACGCCCTGCCCGTCTGGCACGACGACTACGGCCTCACCGGTATATGCGACACCGTCGAACTGCACCACGACGGCCGCATCCTGCCCATCGAACACGAGTCCGGCCGCTACATCCCCGGCGGCCCTGCCGACGTCCAAGCCGCAGCACAGGCCCTCTGCCTGCAATCCATGTTCCAGCGCCCCGTCCCCGAGGCCGCCATCTTCTCCGCCGCCGACCGCAGACGCCACCTCATCACCATCGACGACACCCTGCATGGCCAAAACCCCTGACCAACCAGG # Right flank : CGCGCGGAGCAGCTCAGCGTCGACTACCTGGATCTTCTCGAACGCCGCCGCCCTCCCGGGGACGTGCGGCTCGCCCGCTTCGGCGTCAACGGCGACTTCGCCCACAACCTCCTGCGGCGCCTGGACGCCGTCGTCGCGGACCCGCCCGAGGTGATCACCGTGCTGATCGGGACCAACGACGCCCGGGCGAGCCTCGCCGGCTACCCGGTCGAGCAGGTCGTGCAGCGCAAACGGCTCCCCGAGCGCCCGTCGGCGGGCTGGTTCCAGCAGTGCCTGGGAGCCGTCGTCGCCCGGCTGCGGGCCGAGACCGACGCGAGGATCGGTCTGCTGTCGCTCCCCGTGCTCGGCCAGCAACTCGACGGACCGGCGGCGCGGGCATCGCTGGCGTACAGCCGCCTGATCGCCGAGGTCGCCGCCGCCGAGAAGGTGGCCTGCCTTCCGCTCCACGAACGCCAGACGGAGGAACTGCGCCGGGCGGACGCGCCGCCGGTTGCCTACCG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTCCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-16.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 638857-641093 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACMSJ010000004.1 Streptomyces sp. CBG9 tig00000036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 638857 37 100.0 37 ..................................... ATGGAAACGCTGGCCCGTGAGGCCACGGAGCACCGCC 638931 37 100.0 37 ..................................... TCGTAGGTGACGCCGGCGTCGGTGGCTTTCGAGCGCA 639005 37 100.0 36 ..................................... CATGTCGCCCTTGTAGCCGTCGCGGGTGCCGTCGGC 639078 37 100.0 36 ..................................... GCGATGGTCTGGTGGGTCAGGAAGTTCATGGTCAGT C [639088] 639152 37 100.0 35 ..................................... ACCAGGGGGCGGCCGGCGTGGTGGTTGGCGGCGTT 639224 37 97.3 37 ..............T...................... CAGGCCGCCGAGATCCTGGCGGGAAACAACCGACAGC 639298 37 100.0 37 ..................................... TCCACCGCGGCGTCGACGGTGACGACCAGCTTCTCGC 639372 37 100.0 37 ..................................... CGCGCCGGGGTCCACGTCGAGGAGCGCACCTGGGGCA 639446 37 100.0 36 ..................................... GTCTGGATGACCGAGTACTCCGGCGCGAGCGAGGCG 639519 37 100.0 37 ..................................... CCCCGGGTCAGCCCGGGGTACGCCGCGTAGGCGTTCG 639593 37 97.3 37 ................................A.... TCGTACGTCTCGCGGTGCTCGATCAGGCCCTCGACGT 639667 37 97.3 38 ...........T......................... GCCGAAACCGTGCTCCACTCCGGGGGCATCACCGAGGG 639742 37 100.0 36 ..................................... CCCTACGCCGCAGGCCGTGGACCCCTGCGGGCCGAG 639815 37 100.0 42 ..................................... ACGGCAGACGACGGTCTCATCGCCGGCGAGGAGCGCGGTGGC 639894 37 94.6 34 .........C...................G....... ATGCCGCGTCCAGGTCGAGGTCGGCGGCGATGTC 639965 37 97.3 38 .........A........................... ACCGCCGACGACGGGGCAGCCTCCGTCGCCGTCCTCAC 640040 36 91.9 36 ..........T....-C.................... AATGGGCTCGGCGGCTACGTCAAGGGCGCGGCTGCG 640112 37 100.0 35 ..................................... CCCGGCGTCGACCGCCCCAAGGCCAAGGAGTTGAC 640184 37 91.9 37 ...A................T....A........... CCCGCACCCCTCACCGCCCCAGCACCCTAAGCCGGGC 640258 37 97.3 37 ................T.................... CAGCGCGGTGATGCGCTGCTCCAGTTCGGCGAAGTAG 640332 37 94.6 36 .....................CA.............. CCCCTGGTCCCGTCTGGCGGGTCGCGCGAAGCGCGG 640405 37 97.3 38 ..........T.......................... CCCCAGGTCCCGCCGGGCTCGACGGTTGCCTACCTGCC 640480 37 97.3 39 .............................G....... TGCGAGGCGAGCTGCGCGGCGAGGTCGCCGTGGCCCCGG 640556 37 94.6 37 ..A..................C............... GCCGCCTTCCGGCAGCGGTCGGAGCAGTAAATCTTGG 640630 37 94.6 36 .........A.....................T..... ATGTAGTTGGCGCCGGCGAACGTCGCACCGGTCAGG 640703 37 94.6 36 .........A....G...................... TACGTCGCCATGACGCGCGGCCGCGAGCGGAACACC 640776 37 97.3 38 ...............A..................... AACACGGCGGCGATCCGGGGAACCTGGTCGGCGTGACG 640851 37 94.6 36 ...............A.........C........... GTCGCCCAGGCCGATGACTCCGGGCACACGGTGAGC CGC [640859] 640927 37 89.2 36 ..........T...T........TA............ CACTCCGCCTCGGCGCACCAGCGCGCTGCCCAGACG 641000 37 97.3 20 ......................A.............. ATCGCAGCCAGCGGCCGGCC Deletion [641057] 641057 37 67.6 0 C.CCTC.A..G.AG...T....A.............T | ========== ====== ====== ====== ===================================== ========================================== ================== 31 37 96.3 36 GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : CCACCCGAGCCGCCAGCACCGTCCCCGCCTCCTTGTGCGGCACCCCCACCCGGCCACCCGACCCCTCAACCACCCCCAACCGCTCCTGCCAGGCACAACACACCCCTTCCCCACGTCATGCACCAACCCCAGAAACTCCGCCGCCTCCCCCGCCCCGAACACCTCACCGAACCCCCGCGCCAAAGCAGCCGAACCCCGCAGGTGATCCACCAGCAGATGCCGCACACCCCACGAATTCCGGCTGTGCGCGAACAACTCACGACCCGACATCCCGGCCCCCTCACCGATCGACCACCCACCGAAGGCAGCCACCGTAAAGTGGACCACCGACACCACCAACCCCGACCACCCCGAAGCGACCAGCCAGGCCGCTTCGGAACCTGAAGCACACACACGACACGCCAATCACACCCAAGGAGAATGTCAGATTTGCTCGCAATCGGGCCTTGCTTAACTGGTGGTCGAGAGCACTCAGACAGACAAACCCCTGGCCAACCAGG # Right flank : TGCGACCAGCCCGGACTTGCCGCGGACCTTGGTGAACGCAGCGACGAGCGCCTCCCATGACTACGGAACAGCCGTACTCCTGGATCGCGAAGGCCCCCGCCGAGACGGGGGCCTTGCATATACGCAGGTCAAGCGCCTATCACGAAGGTGAATTCAAGGTGGGGCTCTTGGAATGCATCCGAATCGCCGGATGGCCGCCCACCTCACCTCCCTCCTGCCGGGCGTGCGGATCAACACCGAGCCCGAGCCCGGGCCCGACCGGGGCGCGTTCCTCATCGGCGGGGAGCGGTACCGGATGGAGCAGGGCGTGGGCGAGCACGTGCTGCTGGCGCGGCTGACGGGCGGCCAGGGCGGGCGCCCGGTCTTCCTGTTCTGCGGGCAGCGGCCGATCACGCCGCAGGCGGCGACGCGCTACCTGGCCCGGCACCACGAGAAGCTGGCGCGCAAGTACGGCACGGGCACCTTCGTCCTGCTGCTGAAGGTGGTCAACTCGGCGGCGT # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-18.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //