Array 1 312772-312938 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMBZ01000004.1 Paenibacillus alvei DSM 29 PAV_4c, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 312772 32 100.0 36 ................................ CATGAATTACGCAAAAACGTCAGCTATGGATATAAG 312840 32 100.0 35 ................................ TAAAACAGCGGAGTTACGAGCAAACAACTCGATAA 312907 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 3 32 100.0 36 GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Left flank : GAAGATTGGCGATGCTGTTAAGGCAGGCGAGTCTTTGGTAACAATCCATGCGAATCGTGAAAATGTGGATGACGTCATTGCAAAAATTTACGAGAACATTCGGATTAGCGATCATGCTGAGGCACCGGTGCTTGTCCATAATATCGTAACGGAATAAATAGGAAAAGGAGAGCCGTGTATGACGAAGGGGGTATTTCGACCTGAGTCATGCACGGCTTTTGTATTTTGTAGTTGCTTTATAAATATAGTATTTACCTAAATTATCAGAATGGTATATATTGGGGGGTATAAGTGTGGTCATAAAGCAGGGTTAATTCTGGTGCGAATGTATAGTGCACATGAAAATGCCGGGATATTCGCATCTGTTATTATGCATTTTTATCCATTTTTTTCTCTCGGCAACACTGTATCTATCTTGGTTTTAGACCGAAAAGTTCGTTATAATGAGTGAACAAATCATTAACGGAAGTGATTTTATAAATATAGGCTCACTTTCCGCT # Right flank : TTAATATGCGTGTGATCTGCATAGATACATCAATGTATAGCCGCATCCTACGCGGATCGTAATTTTTGGTCGTGAAGGTTGTACGGAGTGGTGGAGTGGAGAGTCATATCCGATATGAGAGCATGAATCGAATACCTAATAACCTGCACAGGACATCAATGGAACTAACGCTAGTTCGAGAGGTGTCCTTTTTCTTGTTCACATATGTCGTTTACTATATACAAATAATATGGTAAATTGTAGATAATTGTGAGGTTCTGTAGAAATAGGTCAAAAGTATTGCCTTTGTTGTCTTTGTTCATATCTTGAAAATCATGACACACAACGAGGAGCGTTGATATGTTTTCGATTGCTCATATTCGTGAAAACGACCAACAGGTACAGACGGTCGAGGCGCATTTGTTAGAGGTAAGAACATTAGCGGAAGGTTACGGTAGTAAGCTGGGTGTCCCTCATGTGACCGGACTAGCAGGTATGCTCCATGACATGGGAAAATATTC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.00,-9.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 323857-326444 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMBZ01000004.1 Paenibacillus alvei DSM 29 PAV_4c, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 323857 32 100.0 35 ................................ AAATTTATAAGTCGTATTTGGACTCAATTTTTTAA 323924 32 100.0 33 ................................ ATGGTGTGGACGGTGTAAGCCCATACGTAGTAA 323989 32 100.0 35 ................................ ATCTGTTCCAGCTTCGCCAAAATCGCATTTAACAC 324056 32 100.0 33 ................................ ACAGCACTAATTATTGCTTTTGTCATAAAACCC 324121 32 100.0 33 ................................ CGATACAAGGTATAAGAGGATGCACGAATATCA 324186 32 100.0 35 ................................ TCTCCATCCAGTCCAGAGACGGGCACAATCATGCA 324253 32 100.0 38 ................................ ACTACTGGAGAGATAAGGACAACCCCCATGAATGCAAA 324323 32 100.0 35 ................................ CTTTGGTACAACCGGATCGGCGAATTTTGAAGAAG 324390 32 100.0 34 ................................ ACGATAACGCTCTGGAACGATACAGACGATCTAT 324456 32 100.0 37 ................................ AAGTAGGCATGTTTTACTTATCCAAACTCAACTTAAT 324525 32 100.0 37 ................................ ACAATTGCTGGAGGAGTGGTGTCATTTATCTTCCCAA 324594 32 100.0 37 ................................ CCTTTTTGTCCGAACCATTAGGTTTAGTATAACTTTG 324663 32 100.0 37 ................................ ACATAAAATACAACGATCATTTTTCATTTGTATCATC 324732 32 100.0 35 ................................ TTCAGAGATTTTTCGCCACTCCGCATATTTAAAAA 324799 32 100.0 35 ................................ ACCACTGGAGAGATAAGGACAACCCCCATGAATGC 324866 32 100.0 34 ................................ ATCCATCCATATGTAGAGTCATCGCCATCCGTCA 324932 32 100.0 36 ................................ CGAACGAACTCGCGCCCTGGCTTAACGGCCAACTAA 325000 32 100.0 35 ................................ TTCAAACCGTCAAAACCTTTCGGATCGACGGCCAC 325067 32 100.0 35 ................................ TGGTAGTCGTCCAAACGCAGGAAGAGGCTGAAATC 325134 32 100.0 33 ................................ ACAACGTTGATTACGACAGAAGAGATTGACGAA 325199 32 100.0 39 ................................ AACTACAATACGGCTATGCAGCTGTCGAAAATCGGGGGA 325270 32 100.0 34 ................................ TCCGAGGGCCTTATTATCGCAGGTGGCGATGTGG 325336 32 100.0 35 ................................ TATATTTGAGGTCGAGAAACAAAACAACAACAATA 325403 32 100.0 34 ................................ TTTGCCATCCAAGTAAGCTTTACCGGAGTGCACG 325469 32 100.0 34 ................................ GATGACTTCGCAAAAACAACATGGTTAGAACTTT 325535 32 100.0 37 ................................ AGTGTCGTATATTCAGCCTCGGAGAAATACACTCTAT 325604 32 100.0 35 ................................ ACCGACAAAGCAAAGAACAACAAGGACGGCAAGTG 325671 32 100.0 34 ................................ TCGGAATGGTCTTCCAAATGTCCGAGACTCCGCA 325737 32 100.0 37 ................................ ATTAAAGTAGGGAAAGGAAGCAGCAGCGGCGCTAGTC 325806 32 100.0 33 ................................ CGCGGATCAGACAGTCAGTCGAAGAGCAATACG 325871 32 100.0 35 ................................ ATTCGAATACATGGCGAAGCAAATGAAATCGTTTT 325938 32 100.0 37 ................................ TTCGAGAACAAGGAACCAAACTGAAACGGGCTACGTC 326007 32 100.0 36 ................................ AATTTCGTAAAACCGATTATAGACGGGTTGGTTGCA 326075 32 100.0 35 ................................ TCAATGGTGGTGATTTCTATACGTTGTCCCGTATC 326142 32 100.0 35 ................................ AGCTACAATAACGGGGCTGAAAAGTATCAACTGCC 326209 32 100.0 37 ................................ ATTTATGGACGCGCAAGGGAACTGTTATCCAACGCAA 326278 32 96.9 36 ....T........................... CAGATGAGGTTAGAAGTAGGATAGTCAGCCTACTGA 326346 32 93.8 36 ..T...............T............. TGTCTAACAGCGGGAAGGTTATCAGTCGTTTTTGTC 326414 31 84.4 0 ......................-..CG...TA | ========== ====== ====== ====== ================================ ======================================= ================== 39 32 99.4 35 GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Left flank : CCCTCCATTTTTATGGAAGTAGGTGTATGGGATTGTTGGTGTTAATTACGTATGATGTCAGCACTACGAGTAGCGATGGACAGAGACGGTTGCGCAAGGTGTCGAAGACGTGCCAGAATTATGGTCAGCGTGTGCAGCATTCGGTGTTCGAATGTAATGTAGATGCCGCTCAATTCGCTGCTCTCAAGATACAGCTCGCGGATATCATTGATCAGAAGGAAGACAGTCTTCGATTCTATCAGTTAGGTAACAACTATAAGAACAAGGTTGAGCATATCGGCGTGAAGGAATCGATTGATTTGGATGGGTCATTGATTTTCTAGTGCGAATGTGAAGTGCACATGATTTCTCTGGGACATTCGCACCTGCTTTTTGCCATTTTTATACCAGTTCCATGATGTCAATGTATGGTTCTCAGTTGTTTTTTATTTAAAATCGCGATTTTTGATTGAATAAATCATTATATTTAGACATTTTGATTGTTTTAGTCAATAATCGCT # Right flank : ACTAGAACGTATATTCGCTGACAAAGTTTGTCACTTGGTGCTTCTATAATAGAGGTATTCTATCGTATAGAGGTGAAAAAGTAGTATGGACTCGACAATTCTTGAGCTGCGGCTTCATCCTAATGTTATCCCCTATTAGCATATTTACTGTTTTATTTCAACACTTAAAAGGACTGGGATAATCATTGTCCCGCTTGCCATTCATCTGTTGGGGATTCCCCAATGGACATAGGTTAGATATATAGTAGCGGCATACCTCATTTTGAAATGGGGCAAAGCAATATGTTATATCTTTAATAGCGTTCATTTCTCTTATGAACGAAGAAGCTATGTGCTGACTGCTAATGAAATCGTACATTGGGGAAACATATGGTTCACCAACTCATCGATTATCCCCACTCAGTCGAAGATGGATGACTTGCCTGACGGCAGCCTGCTGTTCGAAGCAACCTGAATCATGAGCAGAGCTTTCTGAAATGGATCTCGCAGTATGGATCTTC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.00,-9.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 318094-321487 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMBZ01000003.1 Paenibacillus alvei DSM 29 PAV_3c, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 318094 30 100.0 36 .............................. TGAGCTGCCTCCCCTCATTCCGCCGATGATCTTGAT 318160 30 100.0 35 .............................. TCTTTTTTTTATACACTTTCAACAGCCATAAAGAA 318225 30 100.0 36 .............................. TTGCTTCCGATATCGTGGTGAAACTTCCGCCACCTA 318291 30 100.0 36 .............................. ATAGCAGCCCTATCTATAACGGGTAGGGGCTTGAGC 318357 30 100.0 35 .............................. ACGGGCTGTAAAAAGTATACGAATAACTTCGCGCG 318422 30 100.0 33 .............................. ACACCTACCAAAAAACGCTATCCAGATAACAAC 318485 30 100.0 36 .............................. TGCTTAAGCAGCCGCGGACATCTTCTTCTTGAAGAT 318551 30 100.0 37 .............................. AATCTAGTAAGTTGCAAGCCCGTTTGGACTTGCTGGA 318618 30 100.0 36 .............................. CGTCCCACTGAATAACGCTTCAAAACCAAATCCACT 318684 30 100.0 36 .............................. ATAAACGAACGCATTTCCTTAGCATACTCTTCATTC 318750 30 100.0 36 .............................. TTCGCTTTAGAAAGACGATCCTTTTCTCCGCGAAGT 318816 30 100.0 36 .............................. GCCCCTCATTCATCCAGTCAGGAAAAACATAGTCAT 318882 30 100.0 37 .............................. ACATATTGCCAAAGTGGAAATGGGCAATTTTTTGTTA 318949 30 100.0 36 .............................. CGGCTAACCACCCTCCTATTATTGCGCAATCATGAT 319015 30 100.0 35 .............................. TAGCGTTTACCAGAACGAAACTTTAATACAGCTTG 319080 30 100.0 37 .............................. TCCAGATACTAAGTACATAGTTAAAGGTTTAACGCCA 319147 30 100.0 36 .............................. TTCTCAAGCGGATTATTAAGCCCAAGATAGTCAGGC 319213 30 100.0 35 .............................. TCGGGTACTTGCACCAACTCTTTTTTTCGTTGTAT 319278 30 100.0 36 .............................. TGAGAGTCGGGAAGTATAGACGCGTCTCCACTGACA 319344 30 100.0 37 .............................. AGTTGTGCAATCACAATGCCGTCAAGGTTTACTCCCG 319411 30 100.0 36 .............................. TATAAAGGCATCGCAAGCCAATATTTTAATGAAGAA 319477 30 100.0 36 .............................. CCTAGCACATAACGGGCAGGAGTAGATGCAAGTCCA 319543 30 100.0 36 .............................. TTTCACGTAGCTCTCGCATTCGTTCCGGTGAAATAC 319609 30 100.0 36 .............................. AATTCATGATGTTGATGGTGAGTGACATTACCATAA 319675 30 100.0 37 .............................. AGTACGTAAGCAGCATCATAGTCACCATCTTCTTTAC 319742 30 100.0 35 .............................. TGATGAACATTGGTGTTTTCCGTCCCTGCCCGTTC 319807 30 100.0 36 .............................. AAAAACATACCCGCTAATGTGATACCTTGAATTAGG 319873 30 100.0 35 .............................. TACCAGCTCGTCCTCGTCGAGTGCATCCATCCAGA 319938 30 100.0 37 .............................. TGGGTTTCCCATGGAGAAGACCACCCGGATACGCATA 320005 30 100.0 36 .............................. TAGATTCGTGGCGCTACTGCAAAAGCCTTTGATTTA 320071 30 100.0 37 .............................. TTTGTGGAAAGTGTATGAAACGCTTTATTAAGATTGA 320138 30 100.0 36 .............................. AGTTGATGGGTAAACCTGCCGTTGATAATATCATCC 320204 30 100.0 36 .............................. AACCTATGTAACGGCTAAAGGGCTTGAATATATCTA 320270 30 100.0 35 .............................. TCGCCATCCGTCATCTGACTATAAAGCTTATTATC 320335 30 100.0 36 .............................. TTGAGCCGGTGGACGCGTCGATCGTATTTCCGGAAT 320401 30 100.0 36 .............................. AATGGAGTCAAGCTTTCTTCTCGACCCTGCTTGATA 320467 30 100.0 36 .............................. CTGATGATCAAGCAACAGTCCAATTGTAGATGGTAT 320533 30 100.0 36 .............................. TTGGTGTAGACATAGTAGCCTTTTAGGTCGATGTCT 320599 30 100.0 37 .............................. ACGCTGCCCCCTCTCTAATCTGTACATGCGTGTACTT 320666 30 100.0 36 .............................. TGTCCGCACTCTGAGCATGTAATATGTCTATTCCTT 320732 30 100.0 36 .............................. TGTCCGCACTCTGAGCATGTAATATGTCTATTCCTT 320798 30 100.0 36 .............................. ATCCATGGTCGAACCGTGCGGATATGGACAAGGCCG 320864 30 100.0 35 .............................. TATGGTACGAACCTTGCGAGCAAGTATGCGGAGCT 320929 30 100.0 35 .............................. GGGAATAGTGATATCGCTGATCCTTGTGAATCTCC 320994 30 100.0 36 .............................. AGTGTGAAGAATGGTGGGTTAGCTATTCTGGACAAC 321060 30 96.7 37 ..............C............... TATGCGCCAGTAGGACCGGCAACCGAGAAACGTTCAG 321127 30 100.0 36 .............................. ACTACTAATTGACCCGTGATAATCTCCTGCTTTCTT 321193 30 100.0 36 .............................. TACTCCTGGATTGCTTCGGTTACCCGGATCACGAGT 321259 30 100.0 37 .............................. TGGTTTGTGGGGACGCATCAAGATAAATCCGAATGAC 321326 30 100.0 37 .............................. ACAATTGCGGGGCCGAGTTCGATCTTTTTACATCACT 321393 30 96.7 36 ........A..................... ATCGTGGAATGGATATGGGGATGTAAGGGAAAGTTG 321459 29 86.7 0 ...................A...-CA.... | ========== ====== ====== ====== ============================== ===================================== ================== 52 30 99.6 36 GTTGAACAGTAACATTAGATGTATTGAAAT # Left flank : TGTCCGCCATCATGGCTGCAATGGCAAGCGGGCAAGTGATGAACGGAGCTGTAGATGCTGCTCATGCTGGACAGCTTGAAATGAATCTTTTCGCTTACCGTACTGCCCTGATCGGTGCAGCTGTATTTTTGCTCCTTGGCTTATGTGCCGCCTTCCGAATCCAGGACAGCGACGCCGCCACGACCATGAAATCTCGGCAATCTTCCATTCCTGCGACGAAGCCTGTAAAGGCTGAAGGATAGAGGATAAAAGATCACGTATCTATGCCCAAATATTAGAATTTAATGCTTCAATATTCTATCTTTATTACAGAGATAGTCTGTTTTTCCCAACCGTCGTGGATAAGTGATAGAGGCAATATCCAAGTACAGTAAAGGTTTAGAACAATTTTGACGAGTTTTCAGAAAATTCCGTTTTAGGTTGGGAAAATTATAGTGAAACCCGCGTGGTTGTAGTAAAATTGCTATATTAGTGTTTTGAAAAAGCCTGATTTATCTAGG # Right flank : TTAATAAAAGCGCCACCTATACTGTAGCGCATTCTCCTTTTGAAGGATATTAGTTTTAAAGTTTTATATAAAGACAAAATGATTCTTCCTAACAGTTGTAAATAGTGGTACTATAGTTATAGGAAAATCACACCATGTGTTACTGTTGATTTTAGAACATAATTTAAAGTCAAAAATTTCAATGCATCGCACGCTACAGTTAAATAATGAATATTTAATTTGCTTTCATTCTATTGCTCTACTATATCGTTTCATTACTAGAGTCTGCAATAGGTAATAATATTCAATCTACTTAGGAGAGGGGAACGATATGTACTTTGAATTAAAGGCGACGGTCATGCTGAAGCAGTCGGGACATTATTTGGAATGGCCTGAGCGTATAAGTGCTTGGATCGGAAGGGTCAGCTTGCATGATCCCATGTTGAAACACTCACATTATGAAACCGCATACAAGCATTATGTGTATGGAGCACCTTATCCGAGAGAGAATGATGGAATCT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 331003-331361 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMBZ01000003.1 Paenibacillus alvei DSM 29 PAV_3c, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 331003 30 100.0 36 .............................. TTTTGTATATCCTCCGAATTTTTAATATAATTAATA 331069 30 100.0 35 .............................. TACGTGAAAATGAAAAAAAGCCGTCAACGCCATCG 331134 30 100.0 36 .............................. TAACCTACTGACGGGATCCGGTATAAACTGTTGAAA 331200 30 100.0 36 .............................. ATTTTCAGAACACCTTCCATCGACGCGAGCTGAGAT 331266 30 100.0 36 .............................. CATTGTCCCTTAACACGATTCGATCCCCTACGCCGA 331332 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 36 GTTTGACAGTAACATGAGATGTATTGAAAT # Left flank : CCGTTTATGCCTTTTCTTCTTAAAGAACGGAGATGAGCGAGGATGGGGAAGAACTATAACTATGTCATTTTAGTTTATGATATCGGAGAAAAGCGTGTAGGACGCGTATTTAAAATATGCAAAAAATATCTGGTACATTTTCAGAAATCAGTGTTTCGTGGAGCGATTACACCTGCAAATTTATTGAAATTGCGAGGTGAATTGAAGAAGGAAATTGATAAAGAATCTGATTTTGTAGCGATATTCAAAATGACTGGTGACTACGTGTTTGATGAAGAGATTATTGGGGTTAGATTGAACAATTCTGAGTCTTTACTACTCTAATTTTCCCAACCTCTTTCGTACATATAATCGATAGAACCTTAGTGCTACAAGGGATTAGGGAGATTATTGACACGTTATATCATGATTCACTCATAGTTGGGAAATAAATAGCGAAAGCCGCTTGGCTGTAGTAAAATCGACTTATTCAAAGACTAGAAAAACCTGATTTTACTAGG # Right flank : TACTTTTAAACCGCAGGTGAAGGCCTAATGTACGAAGTTTTGACTAAACGAAGGAAGAAAGGTAGAAGTACGAGGTAGAATAAAATACGGCAACCCAAAAAGTCGAGTAGAGCTTTAGGGCCTCCATACTCGACCTTTTAGATTTAACTTACATATGGATCACCCAAAATTGCAGCGGACAATCCTTACTCTGAACCGTTATTCTTCTCGGATTTAGATACTTCAATAGCAGCGGCATCGACCGCTTGTTGGCCTTTTTCATCGATTTGAATTAACGCTTCATCAATGGTTAGTTTGTTGGCAATGACGTCCTCCACGATTTGGTTACCGATACTTTTGAATGCGTTGATGATATCATAATGAACAGATTCATAAGGATTGTGATTGGATGGGGAAGCTTTAAGCATCGTCAATGGGGATAAGTCATGTCCCTTCACGGAAGCGATAAGTTCGGTTCGCGTCGGAAGTCCGTGATTGATTTCCGTGGAAGTCATAGCTCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGACAGTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //