Array 1 355318-350609 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFUL01000001.1 Campylobacter hominis strain NCTC13146, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 355317 30 100.0 36 .............................. TCGAAAGACAGAGAAACATAACATTCACGCATTTTT 355251 30 100.0 35 .............................. TAGATTTCATTTCCATTTTTGTCTTTAAGCCCGGT 355186 30 100.0 35 .............................. TTTATTATTGATAAAGGGAAAAATTTTCTATTTAA 355121 30 100.0 36 .............................. AGCTTTCCAAAATATCCTCGCAGCTTCTATAAAAGT 355055 30 100.0 36 .............................. TTAAACATTATTTTTTAACTGCGCTTATTTTATAAA 354989 30 100.0 36 .............................. CTTATAATTCTAAAGATGGTAAAGTTTATAAAAGCG 354923 30 100.0 36 .............................. CCCTTTAAAAGTTTTAAACCTTTTAATTCAAGCATT 354857 30 100.0 37 .............................. AAAGAAGTTGATGGAAAAATAATTGATACTTGCACGA 354790 30 100.0 36 .............................. ATAGCTTCAAAGGTGCTGAAATCGCCTTTTAAAGCT 354724 30 100.0 37 .............................. CTTCTAGTAGCCCAAATTTTTGTTTTTTCTATTTTTG 354657 30 100.0 36 .............................. TTTAGCCGCTAAATACGGCTTTGCGGTATTATTAAA 354591 30 100.0 37 .............................. GCTTTAAAAATCCGAAAGACTACGAAAAAGAAGCAAC 354524 30 100.0 35 .............................. TTCGCGCAATACGGACAGATCATAACTCTTTACTC 354459 30 100.0 37 .............................. CCAAATGTACCCTCGTTATCCACACCTATACACATTC 354392 30 100.0 34 .............................. TTCATGGCTTCCTGCCACTTCGGATTTGTTATCG 354328 30 100.0 37 .............................. GTTTCAACGCCACCTGAGATATAATTAACTAACTCGC 354261 30 100.0 35 .............................. ATATATTTTTTCATTAATTCCAAAATACCCATAAA 354196 30 100.0 38 .............................. AAGTGATGAAAAAAATGTTTATAAATTTACTTGTAAGC 354128 30 100.0 37 .............................. AAATGGCTGTTCCTGTTTGGGTTTATAGGAAAATAAA 354061 30 100.0 38 .............................. ATAAATTTAACATAACGATTAAAAACCATTTCTGTAGT 353993 30 100.0 34 .............................. TTTAAAATTTTAAAGGAATAAAAAATGGCGGCGG 353929 30 100.0 37 .............................. ATTAGTTTTTCTGCTCCTAGTATTTTTACTAGCACAT 353862 30 100.0 36 .............................. TCAAGCCCGAAAATTACGAAATCGTGGTAACCTTTA 353796 30 100.0 37 .............................. TTATCCAATTTTTCAACTGAAGTTTTAAAATTTAAAG 353729 30 100.0 34 .............................. ATTTCCAAAAACTTATTTTTTATATCTTCATATA 353665 30 100.0 35 .............................. CCAACTCTTCGATTTTTCCTAAAAGTTCCTTTGAA 353600 30 100.0 36 .............................. TAAGCGCGTCCATTTTTTTCTATCATGTCCGGCACA 353534 30 100.0 35 .............................. TTTTTCTAGTTCTTTCTTTATATTAGGACATTCAA 353469 30 100.0 35 .............................. TATACCCCGTTAAATATGCAGGATTAAGTCCCAAA 353404 30 100.0 36 .............................. TAGACAATGTGAGTTTTGAATTAATGGCGCTTAAAG 353338 30 100.0 35 .............................. TTATTTATACGGCAAGCCCTCAGACACAAAAATAG 353273 30 100.0 35 .............................. TTATTTATACGGCAAGCCCTCAGACACAAAAATAG 353208 30 100.0 33 .............................. GCAAATAATAGCAAATGCCGGAGATAAAGGAGC 353145 30 100.0 34 .............................. TCTTCATTCAATACATTATTTGTTATTTTTTCAG 353081 30 100.0 37 .............................. TTATATAAAATCGCTCTTTCTGCAAGGCTCATTTCGC 353014 30 100.0 35 .............................. AAAATTATAGTTTATAAAAAACTTAATTTTTTATT 352949 30 100.0 36 .............................. TCATAAAGTTTATTTAATTCCCAAGGCTCATTTTTT 352883 30 100.0 36 .............................. GTGGCTTTGGCGCCTTGATAAAATCATCATTTTTAT 352817 30 100.0 36 .............................. ACGAAAATAAGAAAGATAAAAAAATAGAAAAATTAT 352751 30 100.0 36 .............................. GTTTTTAAATTAGATACATAATTAAATAAATCATTA 352685 30 100.0 36 .............................. AAGTGTTTTCATCTTGCAAAGTGTCATAAACCAAGT 352619 30 100.0 36 .............................. TCAAGTTTGGCGCCGAAATATACATTAAAATAAATG 352553 30 100.0 36 .............................. AAAGAGCCGATATCTGCGAAGCAAAACTGGAAGAGC 352487 30 100.0 38 .............................. TAATGTTAAAACAACTCTTAATGAAGATAAAATTTATT 352419 30 100.0 36 .............................. CTACGAAACTTATTCCAAAGCCCTCATCTTTAAGTG 352353 30 100.0 35 .............................. TAAACGGAGTAACGTCCAATTTACCACCTATAGCA 352288 30 100.0 36 .............................. CTACGAAACTTATTCCAAAGCCCTCATCTTTAAGTG 352222 30 100.0 36 .............................. TTGTAACTGAGCACAAACTTCCCTTTTATGTTTTTT 352156 30 100.0 36 .............................. CCCGTAATTTTGTTAATTTCTCCCAAAAAAGCCCTG 352090 30 100.0 36 .............................. CCCGTAATTTTGTTAATTTCTCCCAAAAAAGCCCTG 352024 30 100.0 36 .............................. AACGGCGACACAATATCTTAATAACAGCTTTATCAA 351958 30 100.0 36 .............................. CTATACGCCCACAATCCACAAGTATAATATACAGTA 351892 30 100.0 35 .............................. TCTGTTATTCTTATAATTGCTTACCGTTTCGGTAT 351827 30 100.0 35 .............................. ACTTGCAAAAACTTTGGGACTTAATCCTGCATATT 351762 30 100.0 35 .............................. GCTAATGTATTAGCTGCAAATCTTCCACCACCTTT 351697 30 100.0 36 .............................. AACATATCCTGTAAATTAGTGTATTCAATACACCTT 351631 30 100.0 36 .............................. TTTATTCGCACGTTTAAATCGTCCCAAAGTTTTTTA 351565 30 100.0 36 .............................. CTTAATATTAAAGTATCTAAATCGTAAAATTTTGTT 351499 30 100.0 36 .............................. TCTTGTAATGAGTATGATTTTAGTCTTTCTTGTGAA 351433 30 100.0 36 .............................. TGTAATAGCGCATACTTTAACGATTATGCTACTATC 351367 30 100.0 36 .............................. ATGGTTTTATCAAGTTTATAAAATCCTAATTTTTCT 351301 30 100.0 36 .............................. CTTGCTCTTCCAAGCGCTATATTATCGCCACCGTTT 351235 30 100.0 36 .............................. TCTTTTTATGCATTTTTAAAATCTCAAGCGCGCTTT 351169 30 100.0 36 .............................. TCATTTACATTTATAAGGTCGTTTATTTCATTAAGG 351103 30 100.0 36 .............................. AGCTTTGCGACAAGATTTATCTCTTTTTGCTGCATA 351037 30 100.0 36 .............................. TAAAATAGCCCGCTCCTTTTTCCTTTTAATCCTTTG 350971 30 100.0 36 .............................. GCAAAGGTGCTGAAATATTGGAGAAATACACCGCAA 350905 30 100.0 34 .............................. TAGGGAGTTAAAAGTCCGTTTTTAAGTATATTTG 350841 30 96.7 36 .............................C AAGATATTAATGCAAGCGCGGTCGTGTGTTTTTTCT 350775 29 90.0 43 .................C.-.........C TGTATTAATTGTGTTTTCTTTACCAAGGCAGCATTTCTTGCAA 350703 30 100.0 36 .............................. AAAGGATTTTATCAGCTCTTTTAATATTCCTATTGT 350637 29 86.7 0 .......C.......-.........A...A | ========== ====== ====== ====== ============================== =========================================== ================== 72 30 99.6 36 ATTTTGCTATAACAAATTTTGTATTGAAAT # Left flank : CTTATGTTTTCTACGATATCGGCGACAAAGAAAGTGAAGTCGGAAAAAGGCGTGTGACAAAGGTTTTTAAGATATGCAAAAAATACTTTTTGCATCATCAGAAATCCGTTTTTAAAGGCGAAATAACACCTGCAAATTTTATAAAATTTGAAAGCGAAATCAAAAAAGTAACGGATAAAAACCTGGATACAATTACCATACTTAGGCTTTTTAGACAAACAGATGTAAAAGAGATAATAATCGGCGAAAATGATAGCGATAAAATATTTTTATAAGTTAAACCTGATTTTGTTTCAGTTTTTATTGTTTATTCACTTTTTTTGATTTTTCCAAATAAAATTTTGGTATAATTGCTCTGAAATATTTATTTTACGGATATTTTAAGCCGTTCTTTAACAACTCATTGTTAAATTAAAAACGGTTGGAAAATTTTCATAAAATGTAGGCTTCTATGAACTTTTCGCGGTTTAAAATAATTTTTAAACTGTTAAATGATATTT # Right flank : CAATGCTTTTCCAGCTTTTTCGCGCCTTCCGTGTCGCTATCAACGTTTATGCTTTATTCTCATCCATTTTTTGTCCTTAAATAGAAAAATATGCTAAAATAATAAAAAGGAGAATGAAAATGATATATGTCCCACCGACAGGCGCGCTTATATTTGTTCTGTTTTTGTTATTTATGTTTTTATTTACAAAATACTTTATTTCGGCTACAAAGCACTTTATCAGGTTTGGAAATTTTATTACCGATAAATTTACAGCGCCTTTATTCAGCGCTATTTTTAAATTTCTTGGTAGAAAATTTTTAAATTTTTGCAAATACTTGAAATTTAACGTTTTTAAATAATCGATTATTCTCATTTTTTACCTTTTTAATAATCGCCCGCACTCATTTTTTCATCATCTATTTTCATATCGCAATAGTTGAAATCTCTATAATTTTCTTTTGTAATTTCATCGAAAAATGGCGGAAATTCCTTTATGAGCTTAAACTTAAAGCTGCTGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGCTATAACAAATTTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //