Array 1 405875-402524 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017237.1 Moorella thermoacetica strain DSM 103284 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 405874 37 100.0 36 ..................................... TGGTAGACGGCGATCATGCTTTCCCGGATCTTGTCC 405801 37 100.0 34 ..................................... GTATAATCGCTTAAGCCGCTGCTGGGCCTTGCGT 405730 37 100.0 35 ..................................... GAGCCATTAGCGAACAACTCTATAGACCCGTTCGT 405658 37 100.0 34 ..................................... TATTAGTCCCCGGAGCTCTTCTCGCAACATTCCC 405587 37 100.0 34 ..................................... ATGCAGCATTAATTGCCCATTGCGCGGCGGCCAC 405516 37 100.0 34 ..................................... ATGCCACCTTTTATCAGGGTGAGCATAGTCTGCC 405445 37 100.0 35 ..................................... TACTAAAGCCTTTTGCATTGCCCTGCGGGTGTCGG 405373 37 100.0 37 ..................................... CGGCGGTGCTCCTGGTAAACTTCCAGGATGCTGTAGC 405299 37 100.0 35 ..................................... AATCCTTACCTTTGGTCATCCGATTGAACATCCAG 405227 37 100.0 34 ..................................... AAAAGTGCCTGTGTGCAGCACCAAGGGGTTGGTA 405156 37 100.0 36 ..................................... GTAGGTTTCTTCCTCAATAACGGTGAGGTCAATTTC 405083 37 100.0 34 ..................................... CCGGGCGACTTCTTCCCGAATTCGAGGCCGGCAC 405012 37 100.0 36 ..................................... CTGGTAGTCTCCCACGAGCTCAGGCCCTTGGGGTCC 404939 37 100.0 33 ..................................... AAATGGAGGGTCGGAATGTAGTTTAGCTCGCAG 404869 37 100.0 34 ..................................... ATCTTTGCCATATGCTCGCATTCACCAGCTCGGC 404798 37 100.0 37 ..................................... CTTTTCGATTCCCACGCTCACGCCAGGTGCTTTTAGG 404724 37 100.0 34 ..................................... CAGAGGCATCGGTGCCAACCCAACCGTTACTGCC 404653 37 100.0 34 ..................................... ACTTTAAGCCTAACTCAAGTGGACGTGGAGTTAC 404582 37 100.0 37 ..................................... CCGCAATCTGCGATGCGGTACGTTCTGCATAGGCTAT 404508 37 100.0 36 ..................................... CCGGCGTCTGCGTTATCACGGGGTCCTGCTGTTCCT 404435 37 100.0 36 ..................................... AAAGCAACCCAGATAAGCGATAGGCACTCCCAGCAC 404362 37 100.0 35 ..................................... TAGGGTTATAAGGCCGTTTACCGGCTGCCATTCCT 404290 37 100.0 35 ..................................... CGCAAAGAAAGGGGGTGAGGGCATGGCTTTTGGGC 404218 37 100.0 35 ..................................... AACAGCAGGAAGCGGCATGGAACCAGAAGGTTGCA 404146 37 100.0 34 ..................................... TGGCGTATCAATCCCGATAAGCCGGACCGTTTCA 404075 37 100.0 35 ..................................... ACCTCCTCACCTGGCGTATACTCATCTTCCCATCC 404003 37 100.0 34 ..................................... ACAAAGTGTCCAACCGGGATGCCTGCCGAGACGT 403932 37 100.0 33 ..................................... ACATAATTGCCCATGCTGCTCACAAAATCGTGC 403862 37 100.0 35 ..................................... TTATAGCGGTGAAGGGTAGATAGAGGAACTCCTAA 403790 37 100.0 36 ..................................... CGGCGTGGAAAGGCTTGTCCAAAAATCCCCCACGGG 403717 37 100.0 35 ..................................... TTTCGGGGAAAACCCGGCCTGGATAAGCAGGCGCC 403645 37 100.0 35 ..................................... ACTATCAAAGCTAATAATAAGTTCATGCAGTAAGA 403573 37 100.0 38 ..................................... TCGCGGCATGTCTGCATGGTTTTGCAGAAGTTATGGAC 403498 37 100.0 34 ..................................... CCACCCCGGAAATAAAATACCTATTGGACCGGGA 403427 37 100.0 35 ..................................... AATAAAAACTCCTTTACCGAGATCCTTTCTAACGA 403355 37 100.0 35 ..................................... CTCATTATGGGCCGGAAACAATACCGCAAAGCGGC 403283 37 100.0 38 ..................................... AAGCTTTAGATATTTAATAATCATTTCCCGGCTAAAAG 403208 37 100.0 34 ..................................... TTTAAAAACGCCGGCAGTTTTACCCTCCCTGACG 403137 37 100.0 34 ..................................... CAGATTGTCTTTAACCAGGCCGACACCCCTTATG 403066 37 100.0 35 ..................................... CTCAAATCCCTCCCAGGTGAGCGCAGGGACTGCTA 402994 37 100.0 35 ..................................... ACGCTTTCGGTCGACGAGCAGAGAGCCAAGGCCAT 402922 37 100.0 33 ..................................... GCGCTCAAATTGAGCAAAGTCAATTAAAACATT 402852 37 91.9 35 ..C..........T...............G....... CAGGAGGCAGCCGTCGCTGAAGGCGCTGATGATAG 402780 37 97.3 36 ..C.................................. ACGATCAGGCACCACCGCGACCCCAACTACGCATGC 402707 37 97.3 33 ....................T................ ACCTGGTCGCCGTCGATGATGATGCGGTCGAAA 402637 37 94.6 36 ...............T.............G....... TGGACCACGGGCCACGCCGGGGGAGTGGACGAACTG 402564 37 89.2 0 ...A........................A.AA..... | CG,C,C [402527,402538,402547] ========== ====== ====== ====== ===================================== ====================================== ================== 47 37 99.4 35 GTTGCGCCCGGCTCCCATGCCGGGCGAGGATTGAAAC # Left flank : GCTGGGCGAAGGTTGAAACTTAAGTGTGGTGCAGGTAACATGTATATCCTAATAACTTATGATGTTTCTACAGAAACAGAAGCAGGCAAAAAACGCCTGCGTAAAGTTGCCCAGGTTTGTAAAGATTTTGGCCAGCGAGTGCAAAAGTCCGTTTTTGAGTGTTCGGTCAACGAAGCTCAATTTGAGCAGTTAAAGCACCGGCTCTTGCAGTGTATTGATGAAAAAAGCGATAGCCTGCGGATTTACCGGTTGCGCGAACCCCCGAAAAAATACATCCAGGAGTATGGCGTCAACCTAACGATTGATTTTGACGCCCCCCTGGTTTTGTAAACCCGCGAACATATAGCAAGGGGTAAAAGACCGGAAGGTTCGCGATCTTTGAGAATCAAGGCCTGAAGCTAATTTTAGAGGTGAAACATAATGGAGTATTCTAATTCAGTCATCAGGTTCGCGCAGAATAGTAATATAAATGTTGTCTGCCAAGGGTTTTAGCGCGAACT # Right flank : CCATTTCGCTGGATGCAAGAATTAACGATACCAAAAGAAGCCAGGGCTGGGTAAGTTGATGTGGGAGAAATGAACATGATAAAAGGTTTGAAACAATAATAAATCCTAAACCGGCGCAATGACAAATATAGCTTTCACTTGCGCCTCCTCCCGCCACACTTCTATATACAATCTCTCATTAGCGTCATGGCCGGCGTCCAGCACCGTAACCACCCGGGCAGAAAATACCTCGCCGGCGGCATAGCGAGCGGTAAGAATGGCAGCCAGCCCGGAACGCAGGTAACCAAGCTGAGCACCCCAGGGTGAAAGGACGGCGACAGCATGGGGGTCGTGCTTGTTTCCCATAAACGATATGACCTTTTCTTAAAAGACCTGCTCCTAATATAAACCCCATCACCGCCAAATCCTGTCGGCCACATATGTTCACCCCCTAACTTCCCGGTGAAGGAATCACCGGGAATATGGCGAATAATGGATAATAAGGAAATTTTGTAGGGGGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGCCCGGCTCCCATGCCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.30,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1729497-1726151 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017237.1 Moorella thermoacetica strain DSM 103284 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================= ================== 1729496 29 96.6 35 .............T............... CAATAACCACCTCCTTTGCTGAGTATATGCTGCAA 1729432 29 96.6 36 .............T............... GCATTTACAGAGCTCAAACCCGTTAGGCCGGAAGTA 1729367 29 96.6 36 .............T............... CAAATAATTTTACCTTCACAGACGGCATCGACGACC 1729302 29 96.6 36 .............T............... CGGCTACAAAAAGGGACCAGGCGCGGATTGTGTATG 1729237 29 96.6 35 .............T............... TTCTTCCCGGGCCATATCGCGGGTTGCAACTAGTA 1729173 29 96.6 36 .............T............... CAGTGGTAGAATTTAAGTAGAGGATTTTTAACAGGC 1729108 29 96.6 36 .............T............... GACGGCACCTTCGTTGATTGACTGCCCCTTAACGTA 1729043 29 96.6 36 .............T............... GAAAGCCTACCTGAAAAGCATTGGCGTTAACGTTGA 1728978 29 96.6 35 .............T............... GAAGGAGGTGATGAACAATGACGAGACGCAATAGC 1728914 29 96.6 36 .............T............... ATCAACCTCGCCCCGGGCATAGACCCTCTGAAGGTA 1728849 29 96.6 37 .............T............... TGACTTTCCCCAGAGTATTGCAGCAAACTGATTACAC 1728783 29 96.6 36 .............T............... TTTATTTTGGGGGGTCGCATTTGCGGTCGGTGGCAA 1728718 29 96.6 37 .............T............... TTCCTTTCGGCGCCATTCGCTGGTCGTTTTTGCCTCG 1728652 29 96.6 35 .............T............... AGCAATGCTAGCCGCTCGAGCCGCCAATGTCCCGG 1728588 29 96.6 36 .............T............... TTTGAACAGGTCGGGTACTGTTACACCAGTTTCGGC 1728523 29 96.6 36 .............T............... AACCGAGCCTCAAGCTCGGGGGCAATCGCCTGCAGA 1728458 29 96.6 37 .............T............... TCAATCTGGGTAGAGGTATATGACCAGTTAAATAACA 1728392 29 96.6 35 .............T............... GGGGCATCAAGAATGGAAAACATTATTTAAGGGGG 1728328 29 96.6 37 .............T............... AAATGTCAGGGCATTATGGAGGAAGTAAAAGTCGAAT 1728262 29 96.6 36 .............T............... AGGGCCTGCCGTCGCCTGAAGGTAAGGGTGGGGCTA 1728197 29 96.6 36 .............T............... GGGAGTTTACCACCCAGAAGCGGATTAGCAAATTCG 1728132 29 96.6 38 .............T............... GGGCCGGTATCTCAAGCTCAACTGCTTTTGGCTCGTCC 1728065 29 96.6 35 .............T............... AAAAAGGAGGAAGGTCAAAATGAATTTAGCAGATG 1728001 29 100.0 36 ............................. TGAAGATGTATCAGCGAGAATGCCCTGATGAATATG 1727936 29 100.0 35 ............................. AACAGCCGGAGGCGGCCAGTAATCTTAGCGAAAAT 1727872 29 100.0 35 ............................. CATGAATATGACCGAACAGGTGTCGAAATATAGTG 1727808 29 100.0 36 ............................. ACGGGCTGGAAAGTGTTTTTCAAAATATGACTAAGT 1727743 29 100.0 35 ............................. CTTGACAAAAGCATCAGTAATCTTATTCATAGCAT 1727679 29 100.0 36 ............................. CAGACGGGAAAGCATCGATTCAAAGCCCTGAATGAA 1727614 29 100.0 36 ............................. TGGAGGCCCTGGCTGACCTGAAGACCGGCGAGACGG 1727549 29 100.0 35 ............................. GGTCCTCGGATTTTATAAATTCGCGGAAACTCTCG 1727485 29 100.0 36 ............................. TGATTTTTTGGATAGCTTTTGTGTCGGCGCCGGCCC 1727420 29 100.0 38 ............................. GTCGAAAGCAGTTCTCTAATCTTTCTAATGTCGTCATC 1727353 29 100.0 35 ............................. GGGGTTCCGGGCGCAGATCGTGGACGCTATGAAGG 1727289 29 100.0 35 ............................. AAGAACAACCTCGCTGGCTGGCTTGGGCGGCAGAA 1727225 29 100.0 34 ............................. AGGTGATGACTTGATAGTTTGCGCTCATCTTTTG 1727162 29 100.0 35 ............................. TTCTTGCACTTATAAACCCTCCCTTGCGGCGGCGA 1727098 29 100.0 35 ............................. AAGATATAAAGGCATACCTAATAGCCTTAGCCACA 1727034 29 100.0 37 ............................. CGTGATGGTCCCGGAGCCGGTTGTCGGGTGTAAGCTG 1726968 29 100.0 37 ............................. GATAGTTTCGGGTCCGGGTTGGTAGGTTGGCAGACGC 1726902 29 100.0 37 ............................. TGATGTTACCCTTGAAGGCGAAAACGGGGAGGAAATA 1726836 29 100.0 35 ............................. TACACATTGCGTCAAAAGCATCCCAAGATTTTACT 1726772 29 100.0 36 ............................. AAAAAGATTAGCCCACACGGGCCAATCTCCTGCACC 1726707 29 100.0 34 ............................. TGGTACTACCAGGCCTCTAAAGTAATGGAGACTA 1726644 29 100.0 36 ............................. TTGAGTTTTTTGCTGGGTTCACCCGGCAAACAATAA 1726579 29 100.0 36 ............................. TAAAGCGGTGAAGTAGGTGAAGTGGACTGCAAATTA 1726514 29 100.0 45 ............................. AACTCTGTTAAAGAGTTAAAGAGTATGACCCATGATGGTGAAAAC 1726440 29 100.0 36 ............................. GGACTGTGGGTTAAAATTTTGGAGGTGACTTTGTTG 1726375 29 100.0 36 ............................. TCAGGAATTTTATGAGCAACCTGGAAAATACACATT 1726310 29 100.0 36 ............................. AATTAAATGTCGCAATGTCGCGCGCACCCCAAAAAC 1726245 29 100.0 37 ............................. GTCCTATGCCGGGTAAACTCAGCTAAGCACACCCGGC 1726179 29 89.7 0 .......................G.A.G. | ========== ====== ====== ====== ============================= ============================================= ================== 52 29 98.3 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : CTGGAAAAGACAATTTTGCACCGCAAGCTAAAAAGGAATATTCGCTATAAAAGTCTTGTCCGGTTAGACTTATATAAGCTTATAAAGCACCTCCTCGGTGAAGAAAAATATTCCCCCATGAAGGTGTGGTGGTAAATATAAGAGTGATCCTGATCTATGATATTAATACTGAAGACAACGACGGCAAACGGCGCCTGGTAAAGATCATGAAGACCAGCCGTAAATATTTATCTCATGTGCAAAAATCCGTTTTTGAAGGAGATATTACCGAAGGGCAAATATCCTTACTTAAGAAGGAAATAATGGCCATAGTTAACATGAAAAAAGACTTTGTCATCATTTATAGCTTCAGGGATGGAATAAAGCTAAACCGTGAAATCTTGACTGACACCCCCGACCCTACAGATAATTTCCTGTAGTGTAATTGCAAACTGGCGGTTTGACGCAGGGGCTTTTAAAAAATTGCTAAAATCCCTGCCGGGACAAGCCTTTCATCTGCG # Right flank : GTAAAATAACTCCCACCTAGCACTTTTAAGGCAGGGGTATAAACCATATTAATTATTCATCCGGCAAAGAGGAGGCAAAGAAGCAGACCACGGCAGGAGTTGATCCAGGGCATTTTTTTCCTTGAGGTCCAGGTTGGGAAGTCTTTCAAAGAGGTAAATGAGGTATTGGAAGGGATTTAACCCGTTTTCCTTAGCTGTTTCTATGATGCTGTAGGTAATGGCGCTGGCTTTGGCACCCCGCGGGGTGTTGGCAAATAACCAGTTCTTGCGGCCGATGACGAAAGGCTTGATGGAGCGTTCGCTGTGGTTATTATCGAGTTCCAGACGCCCATCCTGTAAAAAGGCGGTGAGTTTATCCCACTGGCCCATGACCTTAAAACACCGCTTTCCATAATCCAGGGATATGCAGAGGCCCTTGTGGAAGGGAACTCGGACAATAACGATAAGCTGCGCAGATATATAAGTGTAATTAAGGAAAATGTCGGAAAGATTTCAACTCT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : GTGACCATCGACCTTAGAGGAATTTGAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //