Array 1 6513-5814 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWGS010000016.1 Cronobacter muytjensii strain Cr150 NODE_16_length_92599_cov_68.178163, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6512 29 100.0 32 ............................. CCGATACCGGGGCGCAGGCGCAATTTGCGTTT 6451 29 100.0 32 ............................. AATGCGTGCGCGATCGCGAAAACTATCTCGAA 6390 29 100.0 32 ............................. CCTTTTCGCGGAGCTCCTTCTCCTCTTTTGCA 6329 29 100.0 32 ............................. TGATGAGGGAGACCAGCAAACGTCTCACGTCG 6268 29 100.0 32 ............................. CCGCTCGGCCATCCAAAGAAAAACGGTAAAAA 6207 29 100.0 32 ............................. CGTGCGCATAGACTCGTTGCTGGTCATTCAGC 6146 29 100.0 32 ............................. TCATACAGGACAAAGTAAAAAGGAAGGTGGCC 6085 29 100.0 32 ............................. CGCTGATCGAGTACAGTTCGTCCAGATCCAGT 6024 29 100.0 32 ............................. AACTTTCTAAAAAACTGGTTCGCTAATAAAAG 5963 29 100.0 32 ............................. AAACCGGCGCTGGCACGCCTGCGGAGGGGGTC 5902 29 100.0 31 ............................. TCATAAACGGGCGCGCCGGGATTAACTCCCA 5842 29 86.2 0 .........A.C.......AA........ | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGAAAGCTTTAAATGGATGATGGCGCACAACATTGCTTTTATTGTCGCCAATATCAACATCAACTACCGACGACCCGCAGTGCTGGGCGATCTGCTGACTATCACCAGCGAGGTAAAACAGCTTAACGGCAAAAGCGGCGTGCTGAGTCAGGTGATTACGCTTGCGCCTGAAGGCGAGGTGGTTGCCGATGCGCTTATCACCTTCGTGTGTGTCGATCTGAAAACGCAGAAAGCGCTGCCAATTGAAGGCGAGCTGCGCGAAAAACTGGAAAACATCACAGGCTAAATTCTGCAATCACGCCGCCTGTGCATGCAGTGATGGATTTCTCTCCGTTAAAGGCGAACAATCCGGTAGATGTTATCGGCCCGGAAGCACTGTAAAAAAATGCTTTTAAAATCAACAGGGCAGCCGCTCTTTAACAAGATGGGTTGTGATGTAAATGTTGGTAGGTTGTGGTGGGCGATAAAAAGGTAAATAAAACAAAGTATTGTCTTTAGA # Right flank : GAACAGGGCGGTGAGTAGAGGCCAGAGAATACGCGCCCTCTGGCCCCCCACATTCTTCAGCGGCGTTTATACTTCAAAGCCAACGTAAAATTTCGCAACACTGCGCAACAAAGGAGAGACGATGCGGGTACACCATCTTAACTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTATGACGGCTTTAGCAAAGGGCTGCACGCGCATCTTATTTGCCACTGCCTGCTGATTGAAACCCAAAACGACGGGCTGGTGCTGGTGGATACCGGCTTTGGTAGGGACGATATGCGCCATCCTGGCCGTCGGTTGCCGCTGTTTTTTCGGGCGCTGAACAATATCCAGTATCGCGAATCATTAACGGCGTTGCATCATATTAAAGCGCTCGGTTTTAAGCCGGAGGATGTACGACATATCGTGCTGACGCATCTCGATTTCGACCACGCAGGCGGTATCAGCGATTTCCCGCATGCGCAGGTGCATCTGATGCAACAGGAGATCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 179174-182388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWGS010000006.1 Cronobacter muytjensii strain Cr150 NODE_6_length_268939_cov_69.117625, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 179174 28 100.0 33 ............................ ATGCAGGTGATCGGCGAAGAGCCACGCCTGGCT 179235 28 100.0 32 ............................ CTGCAGACGTTCGGCAAAGGGCGCAACGATCA 179295 28 100.0 32 ............................ GGCGAGCGCTGGCCGTCGCGCCCGTTCGTGTC 179355 28 100.0 32 ............................ GTGCGGCCGCATGAAAAAATCACAAAAAAAGG 179415 28 100.0 32 ............................ ACTCGTGGAGGCGGTTATGAATGGCTTTTTTG 179475 28 100.0 32 ............................ AGTGGGACCGCTACAAGTCTGGGAACGTCGAC 179535 28 100.0 33 ............................ ATGAGCGCACGCGAAGCCGCACTGCGTAACAGA 179596 28 100.0 32 ............................ ACCAGCGCTTGTCAAAAGCTTTGACCAGTGTG 179656 28 100.0 32 ............................ ATCGGCTTGATAGCAATATTCACACCGCTCGG 179716 28 100.0 32 ............................ CACGGTCAATTCGCTGTGTGGCGGGTAGGGGT 179776 28 100.0 32 ............................ TGCAATCACGAGGCGCCAATTACTGCCTATTG 179836 28 100.0 32 ............................ GCGCCGGACTCCACCGGACGCCGGGGCCAAAT 179896 28 100.0 32 ............................ CCAACACCCGGACAAATCACGCGCAGCGCGTC 179956 28 100.0 32 ............................ GGTATATCGCCGCCCTGTTTGCGCTCTTCTTC 180016 28 100.0 33 ............................ TGCGCGCTCTGGCCGGGAGATGTGGATATCGAA 180077 28 100.0 33 ............................ CGCCACGCGCACAACGACAATTAGCGCCCCGGT 180138 28 100.0 32 ............................ ATTCCCCGTCGGCCAGCTGCTGTGGTGTTATT 180198 28 100.0 32 ............................ TGATGCCACTAAATAAAATAAACCCCGCTCCG 180258 28 100.0 32 ............................ ACCGATGCGCGGGATGCCTGCCATGCTTCCCA 180318 28 100.0 32 ............................ CATACCAGCGCATCAAGGCGGTCGGGTGATTT 180378 28 100.0 33 ............................ GGCGTATCAAAACCAGGTGGCAGCGGCTTATAT 180439 28 100.0 32 ............................ AGTCCAGCGGCGAACCGTTCTACCGTCAACAC 180499 28 100.0 32 ............................ GATGAGTGATGCCGTCAATATTCAGTCGCAGC 180559 28 100.0 32 ............................ AGTGAATCGACAGCAGAACCCGTTCTTGCGTT 180619 28 100.0 32 ............................ GCGTGGCTCGGTGTGGATTTTTTGAACGAGCT 180679 28 100.0 32 ............................ AGTATTTGACGCGCTGGTCAAAATCCCGCTTT 180739 28 100.0 32 ............................ ATCATCGACGGCGAAGAGAAGGATGAATCTGG 180799 28 100.0 32 ............................ GTTCGGCCGCCCGTCGGCCGGAAAATTACGCA 180859 28 100.0 32 ............................ AAATAACGGCAGGGCAGCTGTTGGAGGCTGCT 180919 28 100.0 32 ............................ TGGGTAATCAACCCGCGCGAAGACGACGCGAT 180979 28 100.0 33 ............................ AGCCGTAACCACCAGGGATAACGGACTTGGACT 181040 28 100.0 32 ............................ GATGCGCTTGCTCAGGCCACCTTCATAGCCGC 181100 28 100.0 32 ............................ GGTGACGTTCCGGGCTTTCGGTGATCAGCCTA 181160 28 100.0 32 ............................ AAAAGGAATCGTGGAAGATATCCTGAGCCCCA 181220 28 100.0 32 ............................ GCCTGGCGCCAGCGCAAAGCCGCTGTTAAACC 181280 28 100.0 32 ............................ TTGACGACCTCATCAACAGTAAAGCCCGCGCG 181340 28 100.0 32 ............................ AGGAGTGAGCACACATCATTACGACCGCTATA 181400 28 100.0 32 ............................ ATGCTGGACGTGGTGCTGCCGACGGCGGGAAT 181460 28 100.0 32 ............................ GGCCGCGCTGAAAGTTGACAACGCATACCTCA 181520 28 100.0 32 ............................ ATGCGCATAGCTGTACGCCAGCGACTTGATAT 181580 28 100.0 32 ............................ AGTAGCCAGGGTCATCGCCCGGTTTTGAGCCG 181640 28 100.0 32 ............................ AGCTTAACGGCGTGCTGCCGGCGCCGGTGGGG 181700 28 100.0 32 ............................ CAAGACAGCAACCGAACGAAAATCCTGGTGAA 181760 28 100.0 32 ............................ GTCAACACCGACCAGGCGACCGGCCTTTGAGC 181820 28 100.0 32 ............................ ACTTGCTGCGCTCTTCAGCTGTCTGGTCACGC 181880 28 100.0 32 ............................ TCAGTACATTCGCGCGTGGCAACTGTTGCCAG 181940 28 100.0 32 ............................ GGTAGCGGTGATTTGGTTAGCCTCAACCTCTT 182000 28 100.0 33 ............................ GCGGGCCTATTGATGATGACTGACGACTAAACT 182061 28 100.0 32 ............................ TTCAGTGCGCTGGCCCATGCTGGAGTAATCTT 182121 28 100.0 32 ............................ TCAACCTCTGCTACGCGCGACTCAAGCTCCGC 182181 28 100.0 32 ............................ ACAACCACGACGCGCTACATGCTTTACGTAGG 182241 28 100.0 32 ............................ GACGTCGATGGCGACCGCAACGGAGTACATCC 182301 28 100.0 32 ............................ TGCGCTAACAGAGCGTTGCCGCTGCCAGAGCA 182361 28 89.3 0 ....................T.A..C.. | ========== ====== ====== ====== ============================ ================================= ================== 54 28 99.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CAGAAATACAAAAACAGCCGTCAGGTCGGCCATGTCTTCCGCTTCTGATTCACTCAGCGCAAAACTGTTGGTGGAAAAGGCCAACAGACAGCCCAGAAACATTAGCCTGACTACTTTTCTCATCACGTCTACCACTCGCCAACCGATACCAAACGATAGCACATTTCGTTCAGGCGCGACGAGGATATTTCGCCCTTCCATTGGCCGTTAAATGCCCATCTCAGGCGGCTTTGCGCCAACGTCAGAGGTAAGACAGCGAACAAAAAGGCTGTCTTTAACAGAGGAACGAAAAACCCGCAGGTTGATATGCCGAAGGCGGAACAATGAAGAGGTTTAAAATAAAACCACCGCTGTGAAATCTGCCGTTTAAGACCCTTTTTTACCGCCCGTTCTTAAGATATTGATTTTTATAGTGCTCGACGTTCACGTTAAAAAAGGGTTTCAGGAAGAAAAAGAAGAAATTTGTTTTTAATTCAAACAACCTGGTAATATTCGCTCTT # Right flank : ATGCCATTTTTAATGCCATCATCGACGGCAAAAGCCCATACCTAAAGATTAATAAATAAAATTCTTTATTTATTCGTGCCCTTTGACGTGGCGGAGTGCATGACGACCGTGCATTTGGGCTGATATATTTTAAAAATTAAAAGGATGTCACGATATGGTGCCTTAACTAATCACATAATAACGCGTTATTTATATCTCTCTGTGATATTTCCCCGGTAATTATATAACGGAATTATAAGATGGACCGAAATTCTGTCACGCCGTCTGATTTAAAAACGATTCTCCATTCAAAGCGCGCCAATATTTATTATTTGCAATACTGCCGGGTGCTGGTTAATGGCGGCCGGGTGGAATATGTCACCGATGAAGGGAAAGAGTCGCTTTACTGGAATATCCCCATTGCCAATACCACGGTGGTGATGCTCGGTACCGGGACATCGGTCACACAGGCGGCTATGCGGGAATTCGCCCGGGCGGGCGTGATGGTGGGTTTTTGTGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 191229-192215 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWGS010000006.1 Cronobacter muytjensii strain Cr150 NODE_6_length_268939_cov_69.117625, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 191229 28 100.0 32 ............................ TGACTGGATGCCGTCGCCGTCTGACGGCGGCA 191289 28 100.0 32 ............................ GCGCCAGGCTATTTGAGTGTGATTATCAGGAA 191349 28 100.0 32 ............................ TCCCACGGCAGGCGTTTTGGTTTCGCTGATTT 191409 28 100.0 32 ............................ TATAAGTGGGCGCGCTACGCGTGGAATAGCGT 191469 28 100.0 32 ............................ TTGGCTCGATTACGCAGACTTTCGCTGCGTGT 191529 28 100.0 32 ............................ AGCCCGGTATCGCCGCTGCCACCTCCGGCACG 191589 28 100.0 32 ............................ AGAGCGCGAACGCGTGGCCGACGTGCTCGCGT 191649 28 100.0 32 ............................ GGTTGATTTTGGTATCACTGAGGGGCTACGCA 191709 28 100.0 32 ............................ ATCATCACCCCTCCCTGACCGGCGCTGCGAGC 191769 28 100.0 32 ............................ ATAGAAATGCAGCTGGCGCACGTCAGCGGCGG 191829 28 100.0 32 ............................ TTCACTATTGCTCTGGCGTTAGGGCAAATAAC 191889 28 100.0 32 ............................ TCAATGCGACGGTTAAAACCTTCCTTCACGTG 191949 28 100.0 32 ............................ TGACAAATACGGATTGCCGCATCTAATGACGG 192009 28 100.0 32 ............................ AATCAGTTGAACCACATATGGTCAGGGAGTTG 192069 28 100.0 32 ............................ GGCACGTTCGCGGCAACGGCGGAAAGCTCCGC 192129 28 100.0 32 ............................ ACTGACGCCTCCGGGCTTCGCCCTCCGCGATC 192189 27 78.6 0 ...T.......TA........-C.C... | ========== ====== ====== ====== ============================ ================================ ================== 17 28 98.7 32 GTTCACTGCCGCGCAGGCAGCTTAGAAA # Left flank : CCGGCGCTGGCGGAATTAGAGGCCACGCGCTGGCGGGCAGGGTTACAGGATTACTGCCAGAGCAGCGCAATATTACCCGTGCCTCAGGTGCAGGGCTGGCGGACCGTCTCGCGCGTACAGGTGAAAAGTAATCCCGAACGCCTGATGCGTCGCTCGGTGCGTAAAGGCTGGCTGACGGAAGAAGCGGCGCGGCAACGGCTCTGCGATTTACACGAGCAACAGACCTCTCTGCCGTGGATTCAGGTTAAAAGTCTCTCCAGCGGCCAGTACTACAGGATCTTTATCCAGCACGGCGAGCTACTGACCGCGCCCGTCAGCGGCGTGTTCAGCAGTTATGGATTTAGCTCTAACGCGACGATTCCCTGGTTCTGACCTTTTTTAAAATGCCTCGCTAACCTGTTGATTTTTATCATGCGCTGGCGAGGCGCTAAAAAAGGGTATACGGCATCAAAATGCATAACAGGCTTTTAAAAACAAAGGACTGATTTATTTCAGCGTTA # Right flank : ATCGTATACTGCTCCGCCAGACTTGACCTTCCCGCAAGGGGAGGGTTTAAGCTCAACGGGTGCACGTTGACGATAAGGACTGGAAGATGCAACGCCGAGATTTTATCAAGTACACCGCCGCGCTGGGCGCGTTAAGCGCGCTGCCGACATGGAGCCGGGCCGCGTTTGCCGCAGAGCAACCGGCGCTGCCCATTCCGGCGCTATTGACGCCCGACGCCCGCAGCAGCATTCAGCTTACGGTGCAGGCGGGCAAAACCGCGTTCGCCGGGAAAAATGTCACCACCTGGGGCTATAACGGCTCGCTGCTCGGGCCGGCTATCAAGCTGCGCCAGGGGAAGCCGGTGAATGTCGATATCCGCAATACCCTCGCCGAAGAGACCACGGTGCACTGGCATGGCCTGGAAGTGCCGGGCGCGGTGGATGGCGGCCCCCAGGGCGTTATCGCGCCGGGGCAGACCCGCAGCGTAAGCTTTACGCCGGAGCAGCGCGCCGCGACGTGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //