Array 1 69947-69247 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHJD010000017.1 Streptomyces spectabilis strain CECT 3146 Ga0436941_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69946 29 100.0 32 ............................. GCCGCCGCAGTGACGCCCCACGAGCCGATGTC 69885 29 100.0 32 ............................. AACAGCACCATTCTTTCGTCCTGTTGCGCATT 69824 29 100.0 32 ............................. GCCTCCCCGCGTTTCCGCCGCCGCGGCGGGCC 69763 29 100.0 32 ............................. CCTGACGCTGGCCCAGGTGCTGGACCGGGCGG 69702 29 100.0 32 ............................. GTCGACTTCGCAGGGAAGCCGCGAAGACCGTC 69641 29 100.0 32 ............................. AGGGCGACACGGTTCACCGCGGTGGTCACCTC 69580 29 100.0 32 ............................. CTCGCCGCCATCGAGGAGGCCTACCGCGCGGT 69519 29 100.0 32 ............................. GTGCTCGTCTCTGGTGATCGCGCGATGTGCCG 69458 29 100.0 32 ............................. AGAGCAATCGTCCCGCGGTGGGCGGCGCGGAC 69397 29 100.0 32 ............................. CAGCGCACCGTGTGGCCGCCGGGGGCGTTGTA 69336 29 96.6 32 ........................A.... GTCGCTCCGCCGCCGCGGGCCAGTTCATCCCA 69275 29 89.7 0 ..........T..T.........A..... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GAGCGCGTTCTCTCCGAGCCGGATCAACTCCGCGTCTCTGTCGTCCAGGCCCGCCGCCCGGCACGCGGCAGTCATCACCCGCGTCGCCCCCGCCTCCATGAACCCCTTCTCCGACCCCTGACCAGCGTCAGCCGCCATGCCCGAACCAGCTCCCCTAGTCGCGCGCGATCAACTGGCGCCACGCCCACGGGTGACCAACCCGACGCCCGCCAGACGCGTCATCGACCGTACAGACCACACCACTTGGCCACGAGGGGGCGCCAAGACGACAAGCTGCTGCGAAACGGCCCCATAGCCGCTTGCCTTGGCCACTGCCGCGGCCATCTAGACCGCCTAACATCGACAGCAACCAAGGCTGCACCAGCCCCTGAGACAAGCGACCACCAACCGCCGTCGCATTAACGACTGTACGCATTCGCCATCGAATGACCCCAATGCCGCTATCTCAAGAAGTGAGTCAGAACTCCCCAGTCGCCTGACAAACCCCCAGGTCACCGCCT # Right flank : GAGCTGAGCGGCGAGCACAGCGAACCCGACTCGTGGTCCCCGCGCATACGGGCCCCCCAAGCCACACCCCGCCACACCGCCGAGCCCCGCGCCAAGACATCGGCGCGGGGCTCGCGGAAAGAGGTCGGGAGGCGTCAGGCGTTAGCCGGTACCACGTCCGGCTCGTCGATCGGCGAAGCCGAGGCGTGCTCGTACGCCTCCCGGTCGAGGATGTTCTCGCGCGCCGCGACCAGGACCGGGACCAGGGCCTGGCCCGCGACGTTCGTGGCCGTGCGCATCATGTCGAGCACCGGGTCGATGGCGAGCAGCAGGCCGACGCCCTCCATCGGCAGGCCGAGCGTGGACAGGGTCAGGGTCAGCATGACCGTGGCGCCGGTGAGGCCTGCGGTGGCGGCGGAGCCGACGACCGAGACGAAGGCGATCAGGAGGTACTCCTTGATGCCCATGTTCACGTCGAAGATCTGCGCGACGAAGATCGCGGCGATCGCCGGGTAGATCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 72014-71375 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHJD010000017.1 Streptomyces spectabilis strain CECT 3146 Ga0436941_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 72013 29 100.0 32 ............................. CCCGGCTTGCCCGTGAACGTCACAGGCCAGGT 71952 29 100.0 32 ............................. ATCACGGGGATGCCGTACGGATACTGCACCTC 71891 29 93.1 32 .....................A......T GCGGCGAGCAGGACGCGGTGAAGCGTGTGCTG 71830 29 96.6 32 .....................A....... TGGACCCGCAGCTCAGCCACGGGGTGTGCGCT 71769 29 96.6 32 .....................A....... AGCCGAGCGCATGCAGCCCGCGAGCAGTTCAG 71708 29 93.1 32 ...A................A........ TCCTCGCCCTCCTCGATCGGGTTCAGGCTCAT 71647 29 100.0 32 ............................. TCGACCTGCCACTGGCCGCTGCTGGGGTACGC 71586 29 100.0 32 ............................. ATCTGGCCGCAGACCGCGAAGTGACTGCCGGG 71525 29 96.6 32 ..............G.............. CTGATCCCCCAGGTGCTCGCGCTCCGGGAAGG 71464 29 100.0 32 ............................. GGGCAGGTCGGCGGCGAGTACTCCTCCCCCGG 71403 29 93.1 0 .....................A...A... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 97.2 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : AGCACGGACCCCCAGTACGCGCGCACCCTAGGCTTCTGCCGCATGGTCCTAGCCCAAAGCCAGCTAATGAGCGGCGAATTGGAGGCCGCCATCACAACAGCAAGCCTGGCGGTTGAGGCAGGCGACACCCTGCAGTCCTCTCGCTTCCAGCGATACGTCACCGACTTCCAGACAGAGGTGAGCGAGCACTCAGGCAACCCATCCGTTGCAGCCTTCAGTGAAAAAGTTCGCAACGCACTCGCTCGCTTGGACGACGACTGAGCCTCCACAGAGACGCCCAGCGCGGCTCGCCATCGCCACAGCTGAACAGCAATGGTTTTACTGTCGAGTTGGCCAGAAAGACGTAGCCTCATCGAGTCGTAAGGCTGCACCACCACAGCCCCCGCGCTAGCTCCGAACCGTGAGGTAATGGATGATTCACTCCAAATACTCGCAATGCCCGAGTCTCAAGAAGTGAGTAAAACCGCCCACCCGCCTGACGAACCCCCAGGTCACAGCCT # Right flank : ATAGTGGCCTCTCCCCCCTGGCCGAGGTTGAAGTGGCTCCCACGCATACGCGGTGGCTCCTTCGCGACAGCCCTAGCCTCTACACCCGGAGTGCGGATCCCACCGCGTGCCCATACCTCGCCAAGGGGTACGCCACACCGCCGTAGCCCTACCAGGGCCGCCAATCCCGAGGCCCATCGTCATCCCGCAGTGCCGCGATCCGGCGCCGGTACTCGTCCGCCACCCGCTCACTCACCCGCACGTTCTGCATGAGCCACGTCGTCATGTTGAACTCCTGCAGCCCGCGGAGCGTCGCGTAGCCCTCCCAGTCGTACAGGTCCCGCCCGTACGCGCCCACGAAGTCGGCGTACTGCTGCTCGGTCTGCCAGCCGAGGCTGTGGTGTTCCACGGACGTGACCATCAGGTCCCACTCCGGGTGGTCGAAGCAGAAGACTTCGAAGTCGATCAGGATCACGCGGCCTTGGACGTCCACCATGAGGTTCTGGACGTGGGCATCCCCG # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 678383-678721 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHJD010000003.1 Streptomyces spectabilis strain CECT 3146 Ga0436941_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 678383 29 100.0 32 ............................. TGGTCCCACGGTGAATCCGGGACCATCTCGAA 678444 29 100.0 32 ............................. GCCGGAACTCCGACCCCCGGAACGAAGTCGGA 678505 29 100.0 32 ............................. GGACATCCGCGGCCCGCTTCGCCTCGCGCTCC 678566 29 100.0 32 ............................. TCGAAGGGGCAGCAGAGCGTGGACACCGTGCT 678627 29 100.0 38 ............................. AGCCCCTTCACCTTCACCTTCACGAAGATGATCGCCGC 678694 28 79.3 0 ....-.............A.....CG.AG | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 96.5 33 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TGAAGTGCCGCTGGTCGGCGCGCGTGTGGCTGGATGTGGGCGTGAAGGGCCCGGCGGGCTTGCGCGCGGGGCGGTGGGGCGCTCCAGCCCAGCGAAAAGGCCCGCGGAGTGACGTTTCCGCAGGCCAGATCGATTCTGCTTCGGTATCCCAGAGGGTAACCGCAACAGCTGCTGAACTCGACCCAGTTGCGACTACGAAGAGTAGCCACCCAGAAGGAACGTCGTGAGCTGCTTGACGCGGTGGCGACAGAAACGCGCCGAGGGGGAACCATCTGCGACACGGGGACACTCCCAGCCCTGCCGATGCCGCCCCAACCAAGGCTCACGCGGACGCGTCTCTACAGTCGGGGCTCCAGCGCGAGTTCGTCGCCTGGATGTTGTAATTGGAGAGGGAATTGCGCTACATGAAGGTGATTTGTTCGCATCAGGATGGAATGCCGCTTTCTCAAGAAGTAAGGGAAAATCCACTGTCGAGCGCGTAGAGCCGCAGGTCGCGGCCT # Right flank : GAGCTCATCGAGGCTCTGGGGAGGCTCTGCGCGGCCGCTGCCTTCACTCCTCACCCGTGGAGCGGCGGCCAAGGCGAGCGCCAGGTGTCACGTGGCAGTCAGCCCTGCGGCCGCGGCCAGTTCGCGTACGCCCGGTGTCCGTGGGTGTTTGGTCCGCAGGTCGGAGATGATGGTCCGGATCGCGAGGCGGTCGCGTACCTCGCCCGGCGAGACCCGGGCGGCCGAGAGTAGCTCCGTCGCCGTCTGTTCAGGCTTGCCCCACTGCCACCACGCGCGGCCGAGGTCGGTGTGCAGCCTGGCTTTGCGCTCGGGCGTCCTGAAGTGGCCGGGGTGCAGGCCACGACCCACGTCGAGAGCCGTACCCGCGTCGCCGAGTGCCCAGTGCACGCCGACCGCGTACAGGTCGACGGCGGCCGGCGTAAGGGGGAACAGTCGCTCGGCCGGAGACTCGTCGGGGAGGCTGCGGGCGGCGCGGCGGGCCTCTGTGATCATGACGAGGG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //