Array 1 20621-21084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000045.1 Nostoc sp. XA013 NODE_45_length_42196_cov_165.065321, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 20621 37 100.0 34 ..................................... GTAGATGAAATCTGGGGATTTGCAGCCACAGCAA 20692 37 100.0 36 ..................................... ATGGTATTTAAAGTATTGTTTAGGCTAATTATATTT 20765 37 100.0 34 ..................................... ATTTCCTTGCCAAGTGCAATATTTACCGCGAGTG 20836 37 100.0 35 ..................................... AAGAAAAATGGCAAAGTTTCCCATGTTGTTGATAA 20908 37 100.0 32 ..................................... GAAATTTAAACCCCCACGCCTCAAATTGCAGC 20977 37 100.0 35 ..................................... TGAAAACCACTTTATTTTAGGGTTGACGTAAGCAG 21049 36 97.3 0 ..................-.................. | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 99.6 34 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : GTATTGCATAGGCGTAGCCTAACCCAGGTATGGACTTGAAGTCAGCTAACCTAATCAGGTAGGATATTTATTACAGCAGTTTTCTTTTGCATGAAGTAGAAAGTCACTGGTTTTGAGGCAGGAGGCAGATCGCGCAGCGTGTCGTAGACAAGGCAGGAGGCAGGAGGAAGAAGAATAATTTGATTTGTGAATCCTTGGTTCTGTACCTCATTTAGTTGCAAAGTGCTGTAAGTAAGCAGCTTTACCATCAGATTAGTTAGTTTATTCGCTAAATGCGCGGATAGGTAGGTGTTCGGGAAGGAGTGACTACAAAAATGGCTGAATTGCCCTCTATGCAATAACTTGGGAGTGCTCGCATTTCTAAACCATCCGCGCACCTTATGGGGACTAGTTTTCAGCCATTTGCCTCTAGCCAAATTATAACTCCTCGTGTTATGAGCCTTAAATTCGCGCAATCGAACCTTGAAAACCAAATAAGGCAAGACTTTTACAAGCCAATC # Right flank : CATCAATGCCCATCTCAGGTTTGTCATCTAATTTACCACAAGATTGTAGCACACACTAAAATTTACCCTCCGTCAGCGCCACAACTTAACTCTCTCAATCAATTCGACTAGCTAACTTAGCCCCACACCTTTTACAAAATCCAGCATCTATATCATGGAAAGTCAAAGCACAACCAGAACAAACTGTTTCTACCTGATTAGTAGTTTTCACCACTCGCTTGATTAAATCTCCCACTTGCCAAGGAATCAGCGCAATTCCTGTAAAAATCATCAGTACTGTTAGCAAGCGCCCTAATTCAGAAATTGGAGTAACATCGCCAAATCCCACGGTTGTCATTGTGACAACAGAAAAATAGAATGCATCCAAAAATGTACCGTAATTTTGAGGATTAACCGGATGCTCTACTTGATAAATTAAACCAGAATAAATAAAAACAATTGCAAATAATGTAAATAATATTCGTGCAAAAATCATTCCATCTTCGGTGCTGATACTGGCG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 9571-6593 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000046.1 Nostoc sp. XA013 NODE_46_length_42101_cov_135.071663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 9570 37 100.0 37 ..................................... CTGAGATGCTTTTTGTGACTCGGATAGAGAAGCCGTA 9496 37 100.0 37 ..................................... AGGAAGCGGCGGATAAGGCAGCTGAAGCGATTGGGTG 9422 37 100.0 36 ..................................... TTTGATATTAAAAATGACCAGGAGCAAAGCCGGATT 9349 37 100.0 40 ..................................... AAATAGGAATAGTTTACATGGGTAATATCGATGGGTCGGA 9272 37 100.0 35 ..................................... GTTTAGTTAAAGCTTCATTAAGCTCTTTCCCGCGC 9200 37 100.0 35 ..................................... AGAAATTGAATTTTAGCTCTAGCGTATCCCGGCAT 9128 37 100.0 37 ..................................... TTCCCACCAGCCAATCCTGAACCTAAACCATAAGGAA 9054 37 100.0 35 ..................................... TAATCTGCTTTTTGCAGAATGGGGAGAGCATTTAA 8982 37 100.0 34 ..................................... TTGGTATACTTGGACGTATGGCATTAGCCGCTAG 8911 37 100.0 35 ..................................... ACGCAGTATACCTCTTAGAAGAAAGATACGGAAAG 8839 37 100.0 38 ..................................... AGCCGTAGAGTTTGCGGAATTTCTTTTTCAAATTATGG 8764 37 100.0 37 ..................................... GTTTTAACACTGCCATCACTCTCAGACTCGCTCAAAG 8690 37 100.0 35 ..................................... CCCTCGTAGTTAAAAACTTTGCAAGGTTGACCCCG 8618 37 100.0 36 ..................................... GCCACTGGTTAGTGTTGGCCTTAGGGGAACATGGCA 8545 37 100.0 31 ..................................... TCAAGATTGAATGAGCCACACTTGCATTTAA 8477 37 100.0 36 ..................................... CGGTACTACCAGGGGGAGGAACCACTTGATTTACGA 8404 37 100.0 38 ..................................... GATTTTCTTTATCCCAAACAAAAAAACTTAGGTCTTTG 8329 37 100.0 35 ..................................... ACTTAGGGCAGATGTACTATTGAGTGCTTTACCCA 8257 37 100.0 36 ..................................... CTTTTAAGATACTTACTACTTATGATGAGAAATCTA 8184 37 100.0 38 ..................................... CACCTGTTTACCACCAACCCACTCATCATTTTTATCAG 8109 37 100.0 39 ..................................... ATAAAAGGATTATTGAATATCGTAAAACTTCGCTACCAA 8033 37 100.0 37 ..................................... ACTTCATGATTACAGTCTTGACGCCGGCGAAGAAGAC 7959 37 100.0 35 ..................................... TCGGCATCGGTTTTAACATAGCCTGGTACGTCTAC 7887 37 100.0 35 ..................................... ATCTTTCTTGTGCCTGCCGCGTTTCCGTATATCAA 7815 37 100.0 37 ..................................... CATCCTACACCAACGTGCAAGCCATACTCCGAACCCG 7741 37 100.0 36 ..................................... CTTACCCTAGTCGACCAAGTGCCAGAGCAACGTAAG 7668 37 100.0 35 ..................................... CATAAGTTGTTCCCCTGCCATAATAGTCAGAAATG 7596 37 100.0 39 ..................................... ATTATTATCCCTAATGGTTACGTAACCCTTCTGGGCTAA 7520 37 100.0 40 ..................................... AATGTATCCGGCAACGACTACTCATCACAAAGGAGGGATG 7443 37 100.0 36 ..................................... AGGGAGTGCTAAAAGTTCCCACGGACGTGGTAAAAA 7370 37 100.0 37 ..................................... ATAGAACGGCTGAGAGCAGTCCGCGATAACAAAGTTA 7296 37 100.0 36 ..................................... ATTTTATCACTTTTCTTTTTGGAGAGCGCGATCGCA 7223 37 100.0 40 ..................................... ATTTAAGTCTGAGACAAGCATAAAGTGAACAAGCGTAAAG 7146 37 100.0 36 ..................................... TAGTTTTGCACTCAATAACTTATATGGCAGCCGCAA 7073 37 100.0 38 ..................................... TCATTTGGGAAAAGTTCGCGCATTTTTGCGATCGCTTG 6998 37 100.0 34 ..................................... ATTAACCAGTCTCCGCGATCGGCACTCATCAGCC 6927 37 100.0 37 ..................................... CTAGAGTTCGCTACTGGGAGAGAAAGCCACTGAGAGT 6853 37 100.0 36 ..................................... AATTCTTCTTTTGAGTGGAACCCATAAATGCTTCTG 6780 37 100.0 41 ..................................... AATTCTTCTTGACCTTCAAACTCTTTTTTTAAATTTGTTAC 6702 37 100.0 36 ..................................... ATAGAATCGCTGAAGAAGAAAGAATAATTGCTGAAA 6629 37 91.9 0 ...............C.T..................T | ========== ====== ====== ====== ===================================== ========================================= ================== 41 37 99.8 37 GTTTCTACAAACCAAATCCCCTCACGGGGACTGAAAC # Left flank : ACAAATCTGCTGGGAGAGCGAATTGAGGAACTGACAGAATTATTTACTGCACAACGCAAACGCACAGGAGGGCAGCGTACTGATAAAATTGCTGTCACCTGGGCAACGATTTTGGCCCGGCGAGAGATGGGAGAATCACTCAAGGCAATCGCTGAAGATTTAGATATGCCGATGTTGACCGTGAAAACTTACGTAAAATTAGCCAGAAAATCGCTTAAACAGCAAAGCAGTAGTTGAGAACCTTTGCTTGTGGACAAGGATTAAGTAATTGCCTTATGATTATGTAATCAGCTTGATGGGATGGCAAATCGAAGCGGGGGCTAAAACCCTGGGGGATCTGCCAAAACGGACAGAACCTTGACAAATAAATAACTACAACGTTTCAAAAATTCGGGAAGTTGCAAATAATTTGCAATAAGAGCGGCTGAAAATGACCTTTTTTTTCGATCCGTCAAAATACTTCCCAGGAAGCTTGCCCCATAACAGTTTCAGATGGAGCG # Right flank : ACAAAAAAGGGGAGTCAGGAAGCACCCTAACACTCTCGAAGTTTCCACTAAAGTTGGTGTTCGTATTTAAACTTGCTGTCCAATGTAAATATTATAGATATCCCCGCCAATCTGCCCAGCGTTTACTGTGTCAGCATTAATAAACCCGTCGCCAAATTGGGCATTGCGTAAGTCGTTGTTGGAGGCTTGCTCTCTGTTTTGCCAGCTTACATACCGACCTTAGTTGACTTATACTGATTTTATTGCTACAAATTATACCCGTTTTAAAATACTTGTGTTAATTTTGCTATAGCTTACTTGTAGTCAGGGTTATATGGACTTTGTAGTTTTAGATACTGAGGGAAAATCGGAATTAAGTGAATTGGCGATTGTGGATAGTCAGGGACGGTTGATCTATGAAGGGTTTTCTAGTGATTATCCCAATCACAACAAGAATCTGCCTAACCTTAAAAGTCTCAAAACTCTGCTGACAGAGTTTCTGTCCCTTGTCCAAGGTAAGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTACAAACCAAATCCCCTCACGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 14582-11135 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000046.1 Nostoc sp. XA013 NODE_46_length_42101_cov_135.071663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 14581 37 100.0 36 ..................................... GTAGTGGGCCAATGAATGCGGCATCACCTGGCTTGG 14508 37 100.0 38 ..................................... TTTTTTGGTTTTGCTCCAGGGGGAGGAGTCGCACCGGT 14433 37 100.0 34 ..................................... GCCAGTAAAAAGCCGACTTCACAGCGAACATTCA 14362 37 100.0 39 ..................................... AATTGCTCCCACCAAAAATAAACCGATCTAAAGTATAAG 14286 37 100.0 38 ..................................... CTGGAGTCAATTAACTCAGGCTATCCAATACTTGAAGA 14211 37 100.0 38 ..................................... GCTGACTTTAAACGACAAGCTGATTTAAGTTCTGAGCA 14136 37 100.0 37 ..................................... CTTTTGATATTGGTTCGGTGATAAGTGGCTCTATTGA 14062 37 100.0 35 ..................................... TAATCAAGTTAGAGGTAGGGGGAAGGAAGCTGTAA 13990 37 100.0 37 ..................................... GCGTTGGGAAGGTTTGCCGCGTTTCCTGACGAATTAA 13916 37 100.0 38 ..................................... ACTGTGAACAATAGATATAGATGGCGATCGCGTCAATA 13841 37 100.0 39 ..................................... GAATGACGAGAAATTGGCTTTACAGGGGATGGCGTAAAT 13765 37 100.0 39 ..................................... AGGTCTGGTCATGATTCAGCAGTTGATCAGCTGTCGGAA 13689 37 100.0 38 ..................................... CAAACTACCATGTTTACCATACAGCTTAGACGAGGTTG 13614 37 100.0 38 ..................................... TTAATTAATTAACCTGTCGGATGGGATAGGGGTAGGAA 13539 37 100.0 36 ..................................... TTCTAACATATTTCATTGTCTCCAAAATTTGATATT 13466 37 100.0 36 ..................................... GTTCCGCAATAGTTAGGTGTTCCGTTGTCGATTGAG 13393 37 100.0 35 ..................................... CGAAACGCAGGTATGGGATGGAGTGAATGACATTG 13321 37 100.0 39 ..................................... TTGTATCTAGTTTTTGAGATGCACGCGCCGTTGATGCAA 13245 37 100.0 44 ..................................... GTCTGTCACTATAAGAGGCTGCTATCAACAGCTTAATTCTGCAA 13164 37 100.0 39 ..................................... GTCTGTCACTTCCCCCAATTCCCAATCCCTAGTCCTGAG 13088 37 100.0 38 ..................................... TTTAATAAATCCCTTACTATTAACCTTTTTAAAGCTTC 13013 37 100.0 35 ..................................... GTGCAAAAACTTCTATAGCTATTCATAGCACTACG 12941 37 100.0 36 ..................................... TAGCTAGCCGATTTATTTCCAGTCGTGTAAGTCTTG 12868 37 100.0 35 ..................................... ATCCTGAACATGAGGCGTTCGGTTGCATCGATGAG 12796 37 100.0 37 ..................................... TTGTCATTAGTAGGGTCATCTGAGTTGACTAAACTTA 12722 37 100.0 37 ..................................... GGTAGAACGCCATTCTTGCCTATCACCAACATTTTCG 12648 37 100.0 37 ..................................... TCCCCTAGTTTATCACGGGACTCATTGACTTCGGGAA 12574 37 100.0 39 ..................................... CAAGCCCTGATCACCGCTAAAAAGGATGATATAGGGGAG 12498 37 100.0 37 ..................................... ATCACCTGCACTCGGCAGGCGGCTAATATCTGTTAAA 12424 37 100.0 37 ..................................... CGGTTTTAGGAGTCACTTCTTCTCCAAGGGATGCTTT 12350 37 100.0 35 ..................................... TTTTAACGAATTAGTCCCGACTACCTGGCGCTGAC 12278 37 100.0 37 ..................................... GGCTCCCACTATGAGCGGGGAAAGGATGAGTCCAAAA 12204 37 100.0 35 ..................................... ACGCTATCAAGCTTTACAAATATGAATAAAGTTGA 12132 37 100.0 38 ..................................... ATTGTTGTTCACTAGTACTAGTTATGGGGCAGATCAAG 12057 37 100.0 37 ..................................... CCAGATTAGGAATGCTGTTACCATAATCCCAACTGTA 11983 37 100.0 37 ..................................... AACCTTAGCTTCTGTTTGAACTGCGATCGCTTTTAGG 11909 37 100.0 37 ..................................... ATCCTCACTACTGAGTAAGTATTCAGACAACTTACGC 11835 37 100.0 37 ..................................... CACCAAACTCTCCCTATAAGGCTAAAGGCTTCTGGTT 11761 37 97.3 37 .....................A............... TTCCCCCCAGCCAACCCGGAACCTAAACCGTAAGGAA 11687 37 100.0 37 ..................................... AAATCCTGTTGCTGCTGCTACTTGAGCCGTTATTGTT 11613 37 100.0 37 ..................................... AATACATTGGTGTTTGGGAGGAATTGACCCTCTAGGG 11539 37 100.0 36 ..................................... GCCAATTGTCTTTAGATAAATATTCGCTTCTTACAA 11466 37 100.0 37 ..................................... TTTTCTTCTGAGCAGCAGGAAGAACCGATGATTGATT 11392 37 100.0 37 ..................................... ATCAACCGCAAACTTACCCAGCCGCACATAGCGAAAG 11318 37 100.0 36 ..................................... GAAATACATGGTACATCCGTATAAATTAACCATCAG 11245 37 100.0 36 ..................................... GAAATACATGGTACATCCGTATAAATTAACCATCAG 11172 37 94.6 0 ..........................A.....A.... | G [11142] ========== ====== ====== ====== ===================================== ============================================ ================== 47 37 99.8 37 GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Left flank : TTTATTTGATTATTTACGATTTGCCTGATAACAAAGCTGCAAATAAACGTCGTACTCGCTTACATAAAATGTTGTCTGGTTACGGGAAATGGACACAATACAGCGTTTTTGAGTGTTTTTTAACCGCGATCCAATTTGCTACCCTCCAAACCAAAATAGAAAAATTGGTTAACCCTCAAGAGGATTCGGTACGATTGTATGTACTCGATGCGGGCGCAATCAAACGAACAATTACCTATGGTTCCGAAATTCCTCGACAAGAGCAAACAATAGTTTTATGATTATGTAATCAGCTTGATGATTGGCAAGTCGAAGTGGGGCTAAAACCCTGGGGGATCTGCCAAAATCGCCAGAACCTTGACAAATGAATAACTACAGCGTTTCAATAATTCGGGAAATTGCAAATTAGTTGCAATAAGGCAGGCTGAAAATGACCTTTTTTTTCGATCTGCCAAAAGCATTCCCAGGAAGCCTGCTCTGTAACAGTTTCAGACCGAGCC # Right flank : TTCAAACAGTAATTGCGATCGCAGTTGTTCAAATTAGTTTTCAACAACAAACTTATCGCTAAGGGAATTAATTGTTGTTTGCCTTTTGTTAAGTTAAAGAGGATGGAAATTGCGTACAATATTGAGCATTATTTGTAAAGCCCTAAGCAATGCCAAGAGCAGCTACATCTACTAGTGGTAAACCAAAGCCAAAGCAAAAATCTGTTGCTTCTGTTCTGAGATGGGCAGATGAAACAGAATTGGTGGGATTAGTGTTTGAATTGGAGTCAAGTGCTTCTGCTTTGCTTTACTCGCAGTACACGATAGGACTGCATGCCTGGTTTCTTGAGCAGGTACGACAATTTGACCCAGGTCTTTCAGCGTATCTGCATGATGGAGAATCAGAAAAGCCCTTTAATATCTCAGCTCTGTCAGGTCAACTAGTTGCCAGTGGCAAACAATTACGATTAGAAGCCAACGAAATTTACCACTGGCAGGTGAATGCTTTATCTCAACGGGTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 3 37816-36508 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000046.1 Nostoc sp. XA013 NODE_46_length_42101_cov_135.071663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 37815 37 100.0 40 ..................................... TCTACTCCTTTGTTGCAGTTTTTGGGTAGCCGTGGCAGTG 37738 37 100.0 34 ..................................... TATTTTTCTGCCATTACCTTATTCCGTTTTAGTC 37667 37 100.0 39 ..................................... ATGTAGACATAGCTTTAAATCCTGTAATGTAGCGCGGTG 37591 37 100.0 36 ..................................... ACAAATTTCAACATGATTTTCTTACAGTTTATTCGC 37518 37 100.0 39 ..................................... ATTGAGACAATTATCAAGCACGCGAACAAAATCACTAGA 37442 37 100.0 40 ..................................... CTTGAGCAGCGTATCACCGCCATTGAGGAGCAATTTAAAA 37365 37 100.0 43 ..................................... AATCTTATGATTGCTTTCTTAAGGGCACGGGAGATATGGCGGG 37285 37 100.0 38 ..................................... TACTACGCTGGTAGTATCAATAGAGAATTGCATAAAAA 37210 37 100.0 36 ..................................... CGTAATTCTTCTGTGACTGTAGCCTTACCTACACCG 37137 37 100.0 37 ..................................... AATAAATAGAGTGAATGGCAATGAATTTATTATTAAT 37063 37 100.0 42 ..................................... ATGCTCAAAATAGCGCTAATTCTGCATTAAAGAAAGCTGGTG 36984 37 100.0 35 ..................................... ACGTCTGTAGGACGTTCCGAATCAATGAAACATTG 36912 37 100.0 38 ..................................... AAGTTTTTGAACGTGCCATTTTGGTGATTAATGGTCAC 36837 37 100.0 37 ..................................... AAGCCCAAATCAACTGGGCTGTAACCATTCGAGGCAA 36763 37 100.0 37 ..................................... CTCAAAAGCAGTAAATTTGCTGGATTGGGAGATGGAG 36689 37 100.0 36 ..................................... TCACCAACAAGCGTAATAACCGTACCTTCACCCCAA 36616 37 81.1 35 ........A.....TTA....GT.A............ ATAAACAAGAAATATTTCTCGTATGCTGCTGGATA 36544 37 86.5 0 .....G..A.............A......G......A | ========== ====== ====== ====== ===================================== =========================================== ================== 18 37 98.2 38 GTTTCCACCAACCAAATCCCCTCACGGGGACTGAAAC # Left flank : CCAGTACACCGTGAGAATTGACCACTTAAAGCCGCTCAATTACTTGGAGTCGGAATGTCAGCAGATGCAGGTAATTTGCGATCGCATCAGTAAGTAGGTTACGGGAAAACGAGAGCTTGGAAGAAGCTGCCCGTGCTGTGCTGAAGCATCTGGGTGAACTGAAGCGACCGTATTTGACTGTGGTTGAAGAGAAGTTGTTGAGTGTGATTGAGCGGGAATACAGGCTTGGAGATTAAATCTCCACGAACTCATAGACAATAATAGATACACATCTTATGATTATGGAATCAATTTGATTTTTGGCAAGTCGAAGCGGGGTCAAAAACCCTGGGGATCTGCCGAAATCGCCAGAACCTTGACAAGTAAATAGTTTCACAGTTTCAGTGCTAAGGGAAGTTGATAATTAGTCGCAATAAGTGCGGCTGAAATCGACCTATTTTTGAGGTTCGCCAAAACACTTCCCAGGAAGCTTTGCTCTGTAACAGTTTCAGCACCGAGCG # Right flank : TCTTCAAATTAAGCAAGCCTTTCCTGGCACAATTGATTAACAACTCTTTCGATTTCTAGTGTCATCCAGTCAGATCCGGTCTGTTGGTAAACCTGAACTAATGATTGGTAAAACCACAAAGTTTTTTCTCGACCAGCATTAAAATTAGTCCAGACGACATCTCCACATTGTTGCCAATCAGCTAAAAGCGATCTGGAATTATGCAGTTTGTCAGCCAGAGAAACCAAGCGTACAGAAGGTGAAGCAGAACGGAGATTATTGAGGTAACGCTGCTTACGTTCTTGCCAGGGAGGTTTAGGAGGTGTGTCCCACTCAGTACAGCCATCGATAATAGCTAAAACTGTTTCACCAAAGAGTCGATGGATATCTTCACGAATGGGTTTGCCGCCTTGGTCTTCGACTGCATCATGTAAAAGAGCAGCGATTGCTTCTTCTTCCGTACCTCCAGCTTCTAGTACAAGTGCCGCCACACTCAGTAAATGAGCTATGTAAGGAACGCC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACCAACCAAATCCCCTCACGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 13838-13435 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000057.1 Nostoc sp. XA013 NODE_57_length_32287_cov_156.418128, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 13837 37 100.0 38 ..................................... CAATGCGGCTGGAGCATTGGGAGCAGCTTTGTTAATGC 13762 37 100.0 35 ..................................... CACCTGATACCAGACCGCATATTTATCTGGATCTA 13690 37 100.0 38 ..................................... GCCGTAGGCATCGCTTGGTATTGGACGAGAAGATCCGA 13615 37 100.0 34 ..................................... TAATTCCTATTTCTGCTGCCATATGACCAAATGG 13544 37 100.0 36 ..................................... TGGAATACCAAGGTTTGTTTGCTGTGTTCTTTAAGC 13471 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 100.0 36 ATTGCAATTCAATAAAATCCCTATTAGGGATTGAAAC # Left flank : TCCCAATATGCCAGGAGCAGTACCTTGGACAGCAACCCAGGCACTCAATAATAGTACATTACCTTATGTCGTTCAGTTGGCGAATTTGGGAATTAAGGCACTGGAAGTTAACCCAGCATTGGCTAAAGGTGTAAACGTGCAGAATCATCGCTTGGTGCATCCTGCTGTACAAGAGGTATTCCCTGATTTAGTAAATTAAGGTGTGCAAGGATTAGGCGATCGCTTATTTTAATAGAGGTAGCGATTGGTAATTAGACTAATTTTCTTGCCAAATGCGCGGATGGGTAGGTGTACAAAATGAGAAGGGGCAAAAATTGCTGTACGCTCCATCTATACAAGACTTTGAAGGCAATGGCACTTTCAAACCATCCGCGCACCTTATGGGAACTGGGTTTCAGCGATTTGCATATTGTTGTATAACTATTCTTTGTGCTATGATTCGTTCATTCGCGCAACTGCACCTTGGAAACCAAGTAGAGCAGCGCTTTCAGATTCCAGCG # Right flank : TTTTTGACTCTTTGAAGTGTAAGTTCTAATTCATTTTTAAGGCAATAATTCGTCTACAGCTACACTAAAACCCAGTAATACTTTTTGAGTACTAACCACATCACCAGCTTTAAACCCCAAAACCTGATTATCAGTTATTACAAAAACTAACCGACTTTCAGGAAATACTAGCCAAACTTCCTCGCAACCAGACTGCAAATACTCCTGTGCTTTGAGAAATAATTCTTCAGCTAAATCGGTGGGTGAAACTATTTCAGCAATTAGTGGAAAACTTTGTGGCAAAGTAGGAACATCACCAAACTGAACTACCAATTCAGGCGTAAGATAAGCCACATCAGGACGGCGGCCCTGTTTATATGTGCGACAAGGTACTTCAGTATAAACTTTCCCACCTTGTTGATTGGAGTTGATGTAACTTCTCCAGTAAAAGTAGATGTTGCCTTGAATTTCGCTATGTTTTAATGTCATCCCTATTTTTTCTACTAGTTGCTCATCTACCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCAATAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 6963-8776 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000065.1 Nostoc sp. XA013 NODE_65_length_28624_cov_194.681967, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 6963 37 100.0 37 ..................................... ACAACTTAACAGCATGGCTTGAGGAAAAGGTAGAACC 7037 37 100.0 37 ..................................... GCTTCCATACTCTTAATGGACTAGCTGCGGGATCACC 7111 37 100.0 37 ..................................... TGACCAACATCAATTGCTCTACTAGCTGTTTTCTGGG 7185 37 100.0 38 ..................................... ATCAAGGTGGGATTGCAGCAGGGCACAAAAATCTAGAG 7260 37 100.0 37 ..................................... AGGAATTTTAAGTTTAATTCGTAGCTCGTTATTTATA 7334 37 100.0 35 ..................................... GGGCGATAATGGCAGAAGTTTGTAAGGATATAGAT 7406 37 100.0 35 ..................................... TTGAAGTCGTGAATGAAGCCGGCGACACAATTCTT 7478 37 100.0 37 ..................................... ATGGAGTCAGGCGCTCGTTATCCAGTTGTAAATGTAA 7552 37 100.0 36 ..................................... CGGCCCGGGCTTGGCTGGGCGATAACAATCTAAAAA 7625 37 100.0 35 ..................................... AAGAAAGTCTATGGCTACTGCAAAGCGTATACAAG 7697 37 100.0 35 ..................................... AAGAAAGTCTATGGCTACTGCAAAGCGTATACAAG 7769 37 100.0 35 ..................................... AACTTGGTATCAAGTTTACCTGAGAGGCATTTACT 7841 37 100.0 37 ..................................... ATAAAAACTATAAACATAAACACTAAATGTAGTATAT 7915 37 100.0 37 ..................................... TTACATCTATAGCCGAGATATAGTCTTGCAAAGAAGA 7989 37 100.0 37 ..................................... CATGAAGGAATTGCTAGAGAATCCCTCACGGGCAACT 8063 37 100.0 36 ..................................... TTTGTCGTATCCGCCCCAAAAACCGCTTAAAAAGGG 8136 37 100.0 36 ..................................... ATCTCTAGAATTAGCGCTCAATTCTTGCTCGTATTT 8209 37 100.0 36 ..................................... TGCCAGCATACGGGAGAGCATCATACACTTTGAGCA 8282 37 100.0 39 ..................................... CATCAAGATAGTTAGGAAAATTAAAAGATAAACTTCCAA 8358 37 100.0 38 ..................................... ATTGAATTAGAAGAAGCGATCGCTAACACTAAAGCTCA 8433 37 100.0 42 ..................................... AAAAGTGGGCGGCACTCTCCCCATCGACGATCGCAGAGAAAG 8512 37 100.0 47 ..................................... ATGATCAAAGGCAACATAAGAATTTGTGGTCAGTGATGACCCTGCGC 8596 37 100.0 36 ..................................... TTTACTCTATTATCGGTCTTAGGTACAGCTTGCTCT 8669 37 100.0 34 ..................................... TCGCACTCCCAAGCCCGTTAAGCCTATTGTGGAA 8740 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =============================================== ================== 25 37 100.0 37 GTTTCCAGAACCAATTACCCCGCAAGGGGACTGAAAC # Left flank : TCTGGGATGGCGAACACACGGTTGGGTTGCAACATCTGAAATCTTACGAATACTTAACTGCCGAGTGTGAGCAGATGCAGTTAATCAGCGATCGCCTTGCGCGAATATATTCAGATTCACTGGAGGAGACAGTTAAAAGTCTGTTGCAGTCGTTGGGGAAGGTAAATCGGGCTTATTTAACGGCTGTCGAAGAGAAATTGTTGAGTTTGATTGAGCGAGAATACGGGCTTATAGATCAATCTTCATAAACTCATAGACAATAATAAATACACATCTTATGATTATGGAATCAGTTTGATATTTGGCAAGTCGAAGCGGGGTCAAAAACCCTGGGGATCTGCCAAAATCGCCAGAACCTTGACAAGTAAATAATTACAGCGTTTCAAAAATTTGGGAAGTTGCAAATTAGTTGCAATAAGAGCGGCTGAAAATGACCTTTTTTTTCGATCCGTCAAAAACCTTCCCAGGAAGCTTGCTCCGTAATAGTTTCAGATGGAGCG # Right flank : CAGTTCATCTTGAATGCCAAGGTTAGCGATCGCATAAACCAAGGTTAGTAAAAACTTAAACAACATTCGTACTTTTATTCAGCAGAGTAGTTTTCATAAGCTTTTTTATGAGTATTCTTAATTTGTTGAACTACCCAAGACGGATCTAAAACAGTGGCGCTTGCACCATATTGTAGTATCCTTTGATAAAACCAAAATAAATAGTCCTCTTGGGTCAAAATGTCAACATAGTCTGTGTTCTCTGGCGAGGAAATAATTTTTTCATGAGGTCTGCGGGGTTTGTAGGTGGCTAAAGCACCTGTGAGTCGATAGATAATATCTATTTTTGGGAATTTAGTATAAATCCAAGGGGTATGGGAAGCTGCGCCAATTCGGATAATCCGATCTACTCTAAAAGCAGAGTTCTGTTCAACATTGGGTCTAGTTGGAATATTCCAGCTATGCCAATCTGGAACTAAGGCAAATAAATATAATGAACCATTGTGTAATCTTAGTTCTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAGAACCAATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 19780-20884 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000065.1 Nostoc sp. XA013 NODE_65_length_28624_cov_194.681967, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================ ================== 19780 26 100.0 45 .......................... GCTTCACTACTGTTTTGCCTTAATCTGGCAGTTAGGTTTCCAAAA 19851 26 100.0 43 .......................... AGGATATAGTTGGCGTAAAAAAACAGGCTAATGGTTTCCAAAA A [19876] 19921 26 100.0 45 .......................... ATGCTTCCGAAATTCGACAGCCCGTAAAAAAGCAAGTTTCCAAAA 19992 26 100.0 46 .......................... CGTAATTGTTGGCGAAAAACCATCAACCACAGCTACGTTTCCAAAA 20064 26 100.0 48 .......................... CAGAAACTATTACAATTTAAGAGAATTATTTAGTAATGGTTTCCAAAA 20138 26 100.0 44 .......................... CTGGCAAATCAACGATCGCCCAATATCTCGCCTAGTTTCCAAAA 20208 26 100.0 45 .......................... ATTAAAATTAAGACATTTAAAATTCTATCAATTTGGTTTCCAAAA 20279 26 100.0 45 .......................... TTCCGCTTTACGAATTGTGCCAGCATCAAATCTAAGTTTCCAAAA 20350 26 100.0 47 .......................... GGGACTGAAACTTTACATTTGGGACATTGTTGCACGAATAGCGCTGG 20423 26 100.0 48 .......................... GGGACTGAAACAATCAAAAACTTGGTACACCCAATTCTGTAACTTTAG 20497 26 100.0 47 .......................... GGGACTGAAACGTTTAATTTAAACTATGCGATCGCAATACGCTGGAG 20570 26 100.0 47 .......................... GGGACTGAAACGTTTAATTTAAACTATGCGATCGCAATACGCTGGAG 20643 26 100.0 47 .......................... GGGACTGAAACTTGATAAAGCCTTTGAGCGTAGCGGGTTTATGCCTG 20716 26 100.0 46 .......................... GGGACTGAAACTTGATTTTTCTGGATTTATTGATGGGGTTAGGGCA 20788 26 100.0 45 .......................... GGGACTGAAACTCTCTATCTACAAACAAAACATTATTTACTGTAA 20859 26 96.2 0 .........G................ | ========== ====== ====== ====== ========================== ================================================ ================== 16 26 99.8 46 GTTTCCAAAACCTATTACCCCGCAAG # Left flank : TATTTATGATTTGCCTGATAACAAAGCTGCAAATAAACGTCGTACTCGCTTACATAAAATGTTGTCTGGTTACGGGAAATGGACACAGTACAGCGTTTTTGAGTGTTTTTTAACCGCGATTCAATTTGCTACCCTCCAAACCAAAATAGAAAAATTGGTTAAGCCTGAAGAGGATTCGGTACGATTGTATGTACTTGATGCGGGCGCAATCAAACGAACAATTACCTATGGTTCCGAAATTCCTCGACAAGAGCAAACAATAGTTTTATGATTATGTAATCAGCTTGATGATTGGCAAGTCGAAGTGGGGCTAAAACCCTGAGGGATCTGCCAAAATCGCCAGAACCTTGACAAATGAATAACTACAGCGTTTCAATAATTCGGGAAGTTGCAAATTAATTGCAATAAGGCAGGCTGAAAATGACCTTTTTTTTCGATCTGCCAAAAGCATTCCCAGGAAGCCTGCTCTGTAACAGTTTCAGACCGAGCCGTTTCCAAAA # Right flank : GGGGACTGAAACTCTTTTGGTTTAATGAGGAATAGTTTTCCCGTACACGAGGTTTCATTAACCAGGAAGCTAAAATTTCAAACATCAACCGCGATCGCAGTTGTTCAAAGTAGTTTCCAACGAAGAATTCCCTTGGCAATAAGTTAATTGTTGTTTGGCTGTTGTTCAGTCAAAGAGGATAGAAATTGCGTACAATATTGAGCATTATTTGCAAAGCCCTAAGCAATGCCGAGAGCAGCTACATCTACTAGTGGTAAACCAAAGCCAAAGCAAAAATCTGTTGCTTCTGTTGTGACATGGGCAGATGAAACAGAATTGGTGGGATTAGTGTTTGAACTTGAGTCAAGTGCTTCTGCTTTGCTTTACTCGCAGTACACGATCGGGCTGCACGCCTGGTTTCTTGAGCAGGTACGACAATTTGACCCAGACCTTTCAGCGTATCTGCATGATGGAGAATCAGAAAAGCCCTTTAATATCTCAGCTCTGTCAGGTCAACTAGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAAACCTATTACCCCGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 776-1022 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFY010000160.1 Nostoc sp. XA013 NODE_160_length_4826_cov_211.021281, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================== ================== 776 31 100.0 41 ............................... TGAAACACAACTTACTATATGGTGTCTGATAAGATTGACCA 848 31 96.8 42 ............T.................. TGAAACTTAGGATCATAAGCATAAGTTGTTTGCCTGTCGCAA 921 31 96.8 40 ............T.................. TGAAATGCCCCACGGCCTAACTCTGAGGACAGCACCCGTT 992 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ========================================== ================== 4 31 98.4 41 ATTGCAATTAACCCAAATCCCTATTAGGGAT # Left flank : GATGCACGTCAACAAGCTAATCAAAATATCTACCAGTCACAGCAAAATCAGAATTTGGATGCAACCAAAAAGGAAATTCAGCAACTTCTTAATCAATTAGCTCTAAATAATCCAACAACAGACGCAGTTACAGAAGTAATTCATCAAGAAATTAAACGTAATCCAACACTAAAAGCTAGATTGCAATCAGCGCTAAAAGCAGGAGGAGTGGAAGGGTTAAAAGCAATATTTAACCATCCAGCCTTTAGTATTTCGGCTGAAACAATAAAAGGATTTTTAGAAGCCGGATAGGTAGGTGTGCAAAATAACAATCCGTAAAAAATCGCTGTATTGCCCTATATAACTTGAGAGCCAAAGCATTACTAAACCATCCGCGCACTTTATGTAGACTGCCTTTCAGCGATTTACATCTAGTCAAATGACGAACCGCGTGTTATGATTTTTGCATTCGCGCTATTGAACCTTGAAAACCAAATACAGCAAAGCTTTCAGATGCAGTC # Right flank : TAATGTGTGTCAATTTCAAGTTTTTTATCTGTATCTAGCTCTAAACCATTACTAGCCACAGGCGACAACATAGCCAAACTCGCCGCCGCTCCCAACACCTGCTCGTCAGTCACTTCTAAATATCTCTGCAACTGTTCCAAATTCCGATGCCCTGATATCTCTTGCAATACTCTCAAAGGAATACCGGCATTACTGATCTGAGTTAATGCACTTCTTCTAAAACTGTGCGTACTCACGCCAATTATCCCAACTTGTTTGCAAGCTCCTCTCAAAATCCTAGCGGCTGAGTCTTCGCTGATGTGTCCATCACTGCGACCGGGGAACAAATAAACATCCCCTGCCATTGGGTAATATTCAACGAGTAATCGTCGTAAATCTTCAATCACTGGGATTGAACGGGTTGCTAGTTTACCCTTGGTGTTTGACTTTCTGATAATCAGCCGAGGTCTAACATTGCCTTTGGGTGTGTAGATATCTTGAGTGAACAGGGTACAGCATTC # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACCCAAATCCCTATTAGGGAT # Alternate repeat : ATTGCAATTAACTCAAATCCCTATTAGGGAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //