Array 1 63977-58605 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQQC01000083.1 Acinetobacter baumannii strain Pesh-37 Pa3_S3_L001_R1_001_trimmed_contig_83_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 63976 30 100.0 30 .............................. GTGAATAAGATATAGACTTATCTTTATCCA 63916 30 96.7 30 ............................A. TAAGGGATAGTTTGCTCATGCATGACAGTA 63856 30 93.3 30 ............................GC TTTTTGCTCTCTTACAGTGGTTCTTATAAA 63796 30 93.3 30 ............................AA CACCCACCATTGTTTCGGCTTAAAGAAGTC 63736 30 93.3 30 ............................CA ATTGAGCCATGCTTAGCAATTGATTTTTTA 63676 30 93.3 30 ............................AG ACAAATCTTGAACGGCAAAACCTTCCGGAA 63616 30 96.7 30 .............................A GACATGACCACGTAAAAGCAAACGGAACCA 63556 30 93.3 30 ............................AC AAAATGCAACTATGCAAGCTGGATTTCCGC 63496 30 93.3 30 ............................GG CCAAAAGAAGGGGAAGAGTGTTGTTACATA 63436 30 96.7 30 .............................C TTTGCTCTCAGCCTCATTATTTACACGAAT 63376 30 93.3 30 ............................AA ATTGATTGACAATGCCCCATGTTTTGCCAA 63316 30 93.3 30 ............................AG ACGGCACCAGCGTTGCTACTGTGGCTTATA 63256 30 96.7 30 .............................A AAAAGCCTAGTGATTTTAGAAATTTTTCAA 63196 30 96.7 30 .............................A ATGGTTTTTGCATCATATGGAACTGGTACG 63136 30 93.3 30 ............................AC TAAAGAAGTTAGAGTCAAAAACCAAACCAC 63076 30 93.3 30 ............................GC CACAGCATAAGCAATACTTCGCGCTGAATG 63016 30 96.7 30 ............................A. CCATAGCAATTTCAGACCGCATAGGCTTAA 62956 30 96.7 30 ............................A. GACAGGACATGACAAGGAGGCGGTATGAAA 62896 30 93.3 30 ............................AA TTAAATCCAATTTCCCTAAATCCTTGAACA 62836 30 100.0 30 .............................. ACTACCGAATACAAGGTGGAAAGAATGCAG 62776 30 93.3 30 ............................AA GTAAGCTGAACGTAGCCGCGACCATAATAT 62716 30 93.3 30 ............................AG ATCAATACACCATTGTCAGGTCTTGATACA 62656 30 100.0 30 .............................. GTTGAGCACCAAACCACGAAATATCAACAT 62596 30 93.3 30 ............................AA CCGCGCCAGATTTAGCAACAGTAAAGTTTG 62536 30 96.7 30 ............................G. TCAGGGTTGTATCTGTTAGGATATGAGTAA 62476 30 96.7 30 .............................A AGCTTTTTTTTGATTACTGGTAGTTTAATG 62416 30 100.0 30 .............................. TTGGAGCCTTGCCGCCATCTTCGATTTTTG 62356 30 93.3 30 ............................GC AACCGTTGGTTTTAAGTTAGACCTAATGGT 62296 30 93.3 30 ............................AC AAATGCATAACAGTATCGGTAGCTAATTGA 62236 30 100.0 30 .............................. GACTGTAAATTGCCCTGCTGGAGCAGTATT 62176 30 96.7 31 .............................C ATGTTCTTGAATTGGAGCGCAGACGAGATCA 62115 30 96.7 30 ............................A. TAATGGTCTTGACCGTGTTTACAACGAAGA 62055 30 96.7 30 ............................A. ATACACGCCAATCTTGATTGACAACATCAC 61995 30 93.3 30 ............................CC GTACATGTTGACGTAATCATGTTCATCCTT 61935 30 93.3 30 ............................AC GAATTCCTTTTGCGCATGGCGCATACCAAG 61875 30 100.0 30 .............................. GTGCCTCTTTGGTCAACTGTGACAAGCCAA 61815 30 100.0 30 .............................. AAACCCATACGCTCCAGACAACATTACAAG 61755 30 93.3 30 ............................GA CATGAGTGGGAATATGAGGAAGGTAATTTA 61695 30 100.0 30 .............................. TTAGCTCATTGCTGCGTTGCTCCAATTTAA 61635 30 100.0 30 .............................. CAGAAATCTTTTGTTGAGTGATTGGCGGAA 61575 30 93.3 30 ............................AG AGTCACAAATTTATTTAGGCAAGAAAAATA 61515 30 93.3 30 ............................AC CAAGCCCATTATTCGGGTTTACCGTATTGT 61455 30 96.7 30 ............................A. GCAGAATTAACCCACACAAATCAGCAATAA 61395 30 96.7 30 ............................A. GACAATGATAGCCATAAGACTATGCAATAG 61335 30 96.7 30 ............................A. CAACTTCCAAAGTCAAACCATTAGGAAGTC 61275 30 93.3 30 ............................CC AAAAGGGATTAAGTTCACAAAAGATTTGGC 61215 30 100.0 30 .............................. TTTCAGCCGCCTTCAACATGGCTTCAGCTT 61155 30 96.7 30 ............................A. GCCAAGCGAGATAAGGAAAAGCAAGATAAA 61095 30 93.3 30 ............................CA TCCTTAAATACTGAGATCTTTTTTGATCTT 61035 30 96.7 30 .............................C TGCACGTAGCCTTGCAACGCCCGATTCAAC 60975 30 96.7 30 ............................A. TGTGTTGTCTAAAACAGTCTCACCCTCATT 60915 30 93.3 30 ............................AA TGACATTTATTGAGTGGTGTTCTAGTGGCG 60855 30 96.7 30 .............................C TCGGCACAGGAGTGCATTCGAAGTTGATGA 60795 30 96.7 30 .............................G AATGGGTATTAGAACTCAGTGAAGATATGT 60735 30 96.7 30 .............................A CTGGCTCAGGCAGAGAAGGCATGTCAATGC 60675 30 93.3 30 ............................CA CTTGGGCATGTTCTTAGATCCAGACACAAA 60615 30 96.7 30 .............................C TACCTGCTAATAGCTTCTTTGCCCTAGTTC 60555 30 100.0 30 .............................. GCTTAACCTTCACGCCATTTGGATAAACTG 60495 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 60435 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 60375 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 60315 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 60255 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 60195 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 60135 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 60075 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 60015 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 59955 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 59895 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 59835 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 59775 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 59715 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 59655 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 59595 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 59535 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 59475 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 59415 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 59355 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 59295 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 59235 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 59175 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 59114 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 59054 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 58994 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 58934 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 58874 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 58814 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 58754 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 58694 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 58634 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 90 30 95.3 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //