Array 1 1027891-1029444 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059886.1 Salmonella enterica subsp. diarizonae serovar b,50:-:- strain XXB1403 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1027891 29 100.0 32 ............................. AATGGCGCAGCTTTGGAATATTGGGCCAGCGT 1027952 29 100.0 32 ............................. CAAATCGTCTTGGCTACGTTCGTCTTAACTCG 1028013 29 100.0 32 ............................. GAGCGACGCCAATCACTAATGAAGGGGGCAAC 1028074 29 100.0 32 ............................. TAATAGGTAAATTGTGAATCCGACAACAGCAG 1028135 29 100.0 32 ............................. ACGATGAGGGCGCACAGGGTTGGTCAACGCTG 1028196 29 100.0 32 ............................. TGTTTCTCTTGATCTCAGGGGGAGGGGGAGAA 1028257 29 100.0 32 ............................. GGATACCAATCCTTGGTGTTGGCGCTATCTAT 1028318 29 100.0 32 ............................. ATCCTAACGCTAATGAGGTTGTATGGACCGAG 1028379 29 100.0 32 ............................. ATACATAACAGTTGCATGGAGGCAGACAAATA 1028440 29 100.0 32 ............................. TTGTAACCTGCGGCTATCAGTGCATCGTAATC 1028501 29 100.0 32 ............................. AAAATGCTGATTGCCTGACCCAATCGAGTCCC 1028562 29 100.0 32 ............................. GAGATGCGTTTATCGGAGTAGTTCCATCTTTT 1028623 29 100.0 32 ............................. CAGCCTTTACATCCGCTATCTGCGTCGCGCTA 1028684 29 100.0 32 ............................. CGGGGTCAGCGTCTGGTGGGAGATAAAAAATG 1028745 29 100.0 32 ............................. GGAGAAACACCCGCAGCACCACGGGCGATGCA 1028806 29 100.0 32 ............................. ATTACAAATAATGCGACTATGTATGCAGAAAA 1028867 29 100.0 32 ............................. GTGTCTGGAGATACCACCACGACGCATCGTTA 1028928 29 100.0 32 ............................. GCGCGTTGATAGGTATTGTTCTGGGTATTGGT 1028989 29 100.0 32 ............................. CCAGTGTAATTGTTGTCTGTGACATATAATCC 1029050 29 100.0 32 ............................. TTTACCGCCGCTCAGCTTCGTACCCTGGTAGA 1029111 29 100.0 32 ............................. GCTTACATTGAGATTCCTTTGTTTGTCGTGGG 1029172 29 100.0 32 ............................. GTGGACGACCTTGAGCATTGATTTAGGTTACG 1029233 29 100.0 32 ............................. ATGATTTTCTCCTCAATTACCCGCTATAATAC 1029294 29 96.6 32 .............T............... TTTGCGCTCGCTGACGTCAACAGCTTCTACGC 1029355 29 96.6 32 ............T................ CTGCCGGTCAGGCTGCTGAAGTTACTGTGGTC 1029416 29 86.2 0 ............T............G.TA | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCTGAGCCGGAATCTCTGGGTGACAGCGGACATCGGGGGCATGGTTAATGAGCATGGTGATGGTGGTGACTGAAAACGTACCGCCGCGCCTGCGAGGGCGGCTTGCCATATGGTTACTGGAGATTCGTGCGGGGGTTTATGTTGGCGATACATCAAAACGCATTCGGGAGATGATCTGGCAACAGATTACACAACTGGGTGGAGTCGGAAACGTAGTAATGGCCTGGGCAACAAATACGGAGTCAGGTTTTGAGTTCCAGACCTGGGGGGAGAACCGCCGTATTCCGGTAGATTTGGATGGACTCAGATTAGTTTCTTTTCTTCCCGTTGAAAATCAATGAGTTGAATGTTCTTTAATAATAAGAAATTGTTATCTTAATGTTGGTGGATTGTTGGGTGGCAAAAAAGGCTTTCTGGAACAAATATATAGATTTAGT # Right flank : ATTTTTACCAGCAGATCAGGATGTCTTTTCCGTCTTCGCCAGCTCTTTTACTAGCGGCAGCATTATCCGTACTACGTCGCGACTACGGCGCTCAATTCGTCCTGGCAGCGCCTTGTCAATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGAAGCATTTTTCGCGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTTGTCGCCTCAACGGAAAGCACAGAAATTCCCGCTTTATCGAAAACCTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGACGGATTGAGCCCCGGATTGGTGCTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCTCGATCGCGGGTCAGTGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGCTTGTCGCCAACAATCAGATTATCGAAATTAATGACCAGCAGCGTATTTTTCTTCTCAGCGTCACTCATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //