Array 1 734458-735879 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040421.1 Dolosigranulum pigrum strain KPL3052 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 734458 36 100.0 30 .................................... ACAACAGCAGGAAACGAATGGAACACGGTA 734524 36 100.0 30 .................................... TTCATCTGTTGAGATATAAGCAGTTTTTGT 734590 36 100.0 30 .................................... CTTTAGATGGTGACTATTTAGGTGATGAGT 734656 36 100.0 30 .................................... ATTTTCATGATTATTTAAAACCATTCTATA 734722 36 100.0 30 .................................... ATCTCACCATTCTATAACAACGTACGTATT 734788 36 100.0 30 .................................... CCGAAAATTTGCACTTAAAAAATGCTAATG 734854 36 100.0 30 .................................... TGAATTGCTAGCAGATCACCACGTATACAG 734920 36 100.0 30 .................................... TAAGGGAGTGGGAGAATAAATGACAACACT 734986 36 100.0 30 .................................... GTTGAATACCCGAGTGCTTTCATTGATCGC 735052 36 100.0 30 .................................... GATTAGCGTACTTGCATGTGGATAAAATGC 735118 36 100.0 30 .................................... ACAATGCGGAGCAGATCGAACGTACTTAGC 735184 36 100.0 30 .................................... TTATACAAGTGTTGTAACATGTTGGGGATA 735250 36 100.0 30 .................................... GATTAGCGTACTTGCATGTGGATAAAATGC 735316 36 100.0 30 .................................... TTATACAAGTGTTGTAACATGTTGGGGATA 735382 36 100.0 30 .................................... ATGACTTGAAACAACAAATAGCTGATTTAG 735448 36 100.0 30 .................................... CATAGTTCGCACGGTGAGCACCAATTCGGT 735514 36 100.0 30 .................................... GATTAGCTTTGAAGCAGAGTGTATCCCGCG 735580 36 100.0 30 .................................... TAAGGTATTTGAGTGGCACTATGATAGTGC 735646 36 100.0 30 .................................... TATTCTGTTTAATATTATTTTTCTGTTAGT 735712 36 100.0 30 .................................... TTATACAAGTGTTGTAACATGTTGGGGATA 735778 36 100.0 30 .................................... GATTCGTTTTGACCAGTTTCCGCCTTGAAA 735844 36 94.4 0 ..............................T....T | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.7 30 GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Left flank : GACTAATCAAATTACTGAACTGATTAATGCAGAGGTACTGAATCATGAATTGGATTTAGAACTTGATGAAATTACAATCCAGGAAGTACTTATCGCTTTAGGAGTGAAGATAGAAGTTGATACAGATACACTATTTGAAAAGGTGTTGGAAATTTTTCAAGTCTTTAAATATTTGCGAAATAAAAAATTACTAATACTTGTAAATGCAGCTTCATATTTTACAACCGAGGAGCTTAATGAAATGGCACAGTTTGTCTCATTGTTACAGATGAATGTGCTGATGATCGAACCAAAACCGACTGATTCTGAGATAACACAATATATCCTGGATTCGGACTTCTTTTTAACCATCAAACATGGTAAAATGAAGTAGAAGATAAACTAGAAAAATAGGAGTCGTTCAAAGCTGAAGTTTTGCATGGACGAATGGCGTGATTACGAAATTTTGTGCAAATTTCTTATGAAAATCATGATTTTTTAGAAAAGAAATACTGTGCGAG # Right flank : TGATTGGTCAGATAACTTATGAGTTTTTAGAGTTATAGTGTATTGGTTTTTGATGTAATAATTAATAAAATATATAATCCTGTTTAATCTTCTAGTCAAACTAGCTAATTAAATAGGATTTTTGTTTATTCAGGAGACAAGCTACTTGTGAAGTATTTCCCGTAATTATTAGTCGAAATTGTGGTGGGAATATGCGATAATATAGAGCAAGGAGTGATGGCTGTGAGTAAGGAATTGTTAGTATTGATTGATTATGAAGTGGATGTATTAGATACGTTTCGAGAGATGGCTAGTGAATATCAGTTGGTGAGTGAGTTTGAGGAAGCTGATTTTTCGAAGGTTGAGATCGTACTGGGTTGGGATGAGCGGTTAGTTGATGTGCTTGAGTCTGGTCAGCATCAGTTGAAATGGATTCAGTTATCGACAGCTGGAGTGGATAAGTTGCCACTTGATTTACTAGCGCAAGAAGGTGTGCGGTTGACTTCAGCGAGCGGGATGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //