Array 1 10421-11972 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNAI01000006.1 Ruminococcus bromii strain BIOML-A1 scaffold6_size128087, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 10421 36 100.0 30 .................................... AAAGGCAAAGAGCAGTACGACCCGTCCGAG 10487 36 100.0 30 .................................... AATTCGGGTTTCGTTCCTCGAACCCCTTTA 10553 36 100.0 29 .................................... TCACCGAAGATTTCTTGATAGGCTTGCTT 10618 36 100.0 30 .................................... TCGGCAATGGGTCTTCCAACTTCTTCTGCC 10684 36 100.0 30 .................................... GGCTTTTCGCTCGGCTTCGACCTCAAGCCC 10750 36 100.0 30 .................................... TTGGAAACAAGCATAATATTTCAAGACAGG 10816 36 100.0 30 .................................... TGATTTGGTCTGCGCAGTTTAATGCGATTG 10882 36 100.0 30 .................................... TTTACTTGACTTAAAAAGTAAACTTAGTCA 10948 36 100.0 30 .................................... AGCGCAAGAGCAACGGTTACAATCGGTGTC 11014 36 100.0 30 .................................... GTATATGGACAAAAAAGATTTTGCTGACAA 11080 36 100.0 30 .................................... GTACTGCAAGTCTCTTGACCTTTTCTACTA 11146 36 100.0 30 .................................... TAAAAAATTTCTCAGCTATGCTATCCAGTT 11212 36 100.0 30 .................................... ATAAGTTGATAGTCTGTCATAGTCAGCGTG 11278 36 100.0 30 .................................... TATGTTTTTGTGCCGTCTTGCTCCGCCTTG 11344 36 100.0 30 .................................... GAAAGAAAAATCATAATTGTTTAACTTGTG 11410 36 100.0 30 .................................... ATCGTGGGTATAACATTATGTACACACTCA 11476 36 100.0 30 .................................... TTCTTCAACATCGTACTGATGAGGGTTTGC 11542 36 100.0 30 .................................... AGCCGTGTATAATAAAAAACTTGACAGCAC 11608 36 100.0 29 .................................... CTCTTTAAGAACAAGCACATCATTTTTTA 11673 36 100.0 30 .................................... GGTATTGACAAACATTACAAAATGTGGTAC 11739 36 100.0 30 .................................... ACAAGAAACTTGATGAAATGGCAAGCGACG 11805 36 100.0 30 .................................... TCTTTCGTGCGAGTTCCGCTTGTGACATAC 11871 36 100.0 30 .................................... AACTGATAAAGTTTTCACTATGTCAGATTC 11937 34 88.9 0 .......................T..--.......T | A,C [11958,11970] ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.5 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCTTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATCGAAACAATGGCATTAGTAAAATTGTTTTCATTTGCGCCTGCAGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTTGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACAGTGAATGTGAAAATCTTTTGGAATCCGCTGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTGCCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATAACCTCATAGATTTGCCGTGCACAGTATAGTGGGTGCATTTTATTCCCAATTTGAG # Right flank : TTTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATAAGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAGTTTAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTCCAAAGTAAGTTCCACCATTAAAGTTACTTTGGGGATTAACTATGTACTTTTTTGTTTAAGTTTGCGGTAAATATGAATTGTATAATCCGTTTTATTGTGTTATTATGTAGTAAAATGGTGTGCAACATTGGTGTTTTGAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTCGGGATAATTATATTCCTGTTCGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGATAATTATATTGAAAATTTTGATGTTATTATCTTTTCGGGGCTTATTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //