Array 1 27031-25875 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJESI010000002.1 Staphylococcus pseudintermedius isolate 16S06120-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 27030 36 100.0 29 .................................... TAGGAGGAAGTATCAATGTATTTTCCGAA 26965 36 100.0 30 .................................... TAATGCAACGGCAAAGTATTTGCAGTCGCA 26899 36 100.0 30 .................................... CGTCTTTGCGCGCTTTTCTCCACGCGCATA 26833 36 100.0 30 .................................... AATAGCATTGTAATAGTTACCCTTATTATC 26767 36 100.0 29 .................................... GATAAAAATATTAAAAAGGTGGAGTTTGA 26702 36 100.0 29 .................................... CTGCGCCTAATTTTTCAATTTTAACTATC 26637 36 100.0 30 .................................... GCAAATTTTGGTTTTAGCACGATACCATTT 26571 36 100.0 31 .................................... TTGAATTTTTAAAGCAATTAGCGTGAGAGTT 26504 36 100.0 31 .................................... ACCTAGCTATACTTAACAAGTTATCAACATC 26437 36 100.0 30 .................................... TGTTAATTGCAGTAAATAAATCGTATTTCA 26371 36 100.0 31 .................................... TTTAATTTGTTAAGAAGAGGTTAAATCACTG 26304 36 100.0 29 .................................... GTGGCCAAAACGGTCAGTCAGCCGAAGCA 26239 36 100.0 29 .................................... TAAAATCAGAAACGAAAGGGCAAGCAGTA 26174 36 100.0 30 .................................... CTCAAGTGGTGCGTTGATGGTTATCTTGAA 26108 36 100.0 31 .................................... AACAAAGAGAGAAGTCCCCCGCGCAAAATGA 26041 36 100.0 29 .................................... CACATTGCGTGAACAAATCGAGGGCGTTA 25976 36 100.0 30 .................................... GATGGGAATCCATTTGCAACTGACAGGCGC 25910 36 80.6 0 ..........................AC.TC.TC.A | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 98.9 30 GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Left flank : TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTGATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG # Right flank : CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCGCATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //