Array 1 51488-50531 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADNNJ010000003.1 Alistipes shahii strain D40t1_170626_H5 NODE_3_length_169756_cov_28.5537, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     51487	    36	 100.0	    30	....................................	TAATTGTCCGATGTTGTGGCTGCTTCGTTT	
     51421	    36	 100.0	    30	....................................	CGGCCGTTCTTAACGGCAGCGCGATCTGTA	
     51355	    36	 100.0	    30	....................................	AACGGCACAGCTTTTACGCGTGCGTCCGGC	
     51289	    36	 100.0	    30	....................................	TACAACCTACAAACTAAACATTTCGTACAA	
     51223	    36	 100.0	    30	....................................	CGCTCCGATCATGCCGAATAGGCCTCCAAC	
     51157	    36	 100.0	    30	....................................	CGGACCAGCGACCACCGTTCAGCGCGAGGT	
     51091	    36	 100.0	    29	....................................	GCCGTGTTTCTACCCATCGTATGCACTAT 	
     51026	    36	 100.0	    30	....................................	TTCGTGATCAGCACGGTGACAGAATCCCCG	
     50960	    36	 100.0	    30	....................................	GCATAGACCCTTCGCGCGTGGTCATCATCA	
     50894	    36	 100.0	    30	....................................	AAGGCGGGAGCAAAAGCGCTTCGAGGACCA	
     50828	    36	 100.0	    30	....................................	GGAATGTAAAGTAAATTGTATACATTTGCA	
     50762	    36	 100.0	    29	....................................	ATCTCTTGATCTGTCTTGTCAGTCCAGAT 	
     50697	    36	 100.0	    30	....................................	TCTGATAGCGGGCAAAAACCTTCGAAGGGT	
     50631	    36	 100.0	    29	....................................	ATAAAGTAAATTGTATACATTTGCAGTGT 	
     50566	    36	  97.2	     0	.......................A............	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	  99.8	    30	GTTGTGGTTTGATGTAGAATTTCGATAAGATACAAC	                              	       

# Left flank :   GGACAGCCGCCCGCCCGAATGAAGCGCACCCCGAAAATCCGGAAAAGGATTTCGGGGTGCGCTTTTTATCCGGTTCGTCATCGTCCGCCCGCGGCAGAGCCTCGTGCGCGAATGCGCCCGGGAACAGAAGGCGTCGCTGAATTTCCATTCGCGTGTTTTCCCGGTTTCAGAGTCTCGATATAAAGTATTCCTGCATATTCCAACGATATGCCCTTGATGAACGCTGCAATTGGGGATGCTTCATGTCGGTGCGTCGCACGGCGAGTGGCGGACGGTCCGACATGCGACCTTCTGTTTTCGGCACCATGAACTCCCGAAGGCAAAAAGCCACAGCGCCGGCACACTCCGCAATAGCAACCGACGGTTTTTAAATTATTCACGAAATATAAAAAAAGTCTCCACGGAGTACGCGGAGACAATAGGTTGAAAACCTTCGGCATATAGCCTTATTGTGATAAGATGTAGAATTCTTACACCACAAATATATAAAAAAAACTTTA
# Right flank :  CGGCAGTATTGGAATGCTGCATAATTGCAACTGTTGTTTACATTACCCTTTTGACTCAAGAAGATTTCAAACTCCCTTAAATACGTCAAATCCAATTCATCAAAACGCATATTGACCGAGCGGAATTGCGACACAAGGACCAACGTTACCTTATGTTTGCTGGCGGAACTGTACTTTTCGACTTTTTCCAAGCGTTCGATAATCTGTTTGAAGTACTCCCCGACCGTGCAGTTGATTCGTTTGCCGTTCTGTTCAAACAGCGTATCGAATGTAACGGGAATTTCCAGCACCTCCAACTTTTTGATTTTCCTCTCGTATTCACGTATCTTGGAGGTTATTTGAAACTGTATTTCTGCTCTATCGGGGCAGTCGGCGGTAGGTTGTTGCTTGTCGAAATCCCAATGCACCAAAGCTTCCGAAATGCCCAGACCGACGAACTTACGGCGGCGGTCATGGGTAAAGACAAGAGCAAGAGGGGCTAAACGGTTTCTGTTGATAGC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGGTTTGATGTAGAATTTCGATAAGATACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.68   Confidence: HIGH] 

# Array family : NA
//