Array 1 260478-258330 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLM01000003.1 Levilactobacillus wangkuiensis strain 6-5(1) contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 260477 36 100.0 30 .................................... GCTAGTCCTGCTGATGGTAATGTGCAAGGT 260411 36 100.0 30 .................................... ACGTTTACGTGATTGTTGATGGCACTCCAA 260345 36 100.0 30 .................................... CAGCCACTTTTATATCATCATCAATCCATG 260279 36 100.0 30 .................................... TGGTTTTGGTTAAGGTTAAGACTAGGTTAA 260213 36 100.0 30 .................................... TTTTTCTCCAGTCTGTGGTAATTGCTTCTT 260147 36 100.0 30 .................................... ATATCATTACCTCCTAGGCACACCATCGTG 260081 36 100.0 31 .................................... TACGCCTCAATTGAAGGTGCTGCTTTTGTAA 260014 36 100.0 30 .................................... TTCTACCATTCCACATCCTGGACGAACCTA 259948 36 100.0 30 .................................... TACGCAAAACTTCCGGGACTTTACCGAAGA 259882 36 100.0 30 .................................... TCCAGAGGACACAGAGTTAATCTACGAGGT 259816 36 100.0 30 .................................... GCAACTACATCACGGCAAATAAGGCTATGG 259750 36 100.0 30 .................................... CCTGGGAAAGTTAGCTAGCCTGTTTGACGA 259684 36 100.0 30 .................................... CGCGCGGAAAGTCGACGGGTTCGTGCGCGT 259618 36 97.2 30 ...................................G TCCAGAACCGTTTGTTACTTGTGACCCGCT 259552 36 100.0 30 .................................... AGCCGGCAGCACGCTTCAAAGAGTCCACGA 259486 36 100.0 30 .................................... TTTTTAGGCAAAGAAAAGCCCCTCATGGCT 259420 36 100.0 30 .................................... TGACCGTGAACGTTAGGAGGCGAAACTAAT 259354 36 100.0 30 .................................... CTCATCTCGTCAAAACTTTACTAAGGCACA 259288 36 100.0 30 .................................... CTCATCTCGTCAAAACTTTACTAAGGCACA 259222 36 100.0 30 .................................... CTCATCTCGTCAAAACTTTACTAAGGCACA 259156 36 100.0 30 .................................... CTCATCTCGTCAAAACTTTACTAAGGCACA 259090 36 100.0 30 .................................... CTCATCTCGTCAAAACTTTACTAAGGCACA 259024 36 100.0 30 .................................... TAAAAAGTTCACGGTAACTGTTCAGGGGCA 258958 36 100.0 30 .................................... TTAATAAAATAAAACTTATAAGTGTCATCG 258892 36 100.0 30 .................................... GGATGAAAACGTTCTGACACAACAGCGTGA 258826 36 100.0 30 .................................... AAGTCAAAGCCATGTACCTACAGAGCCTAC 258760 36 100.0 30 .................................... TTTGAAAGTCTTGGCCACCGCGCCCACGAA 258694 36 100.0 30 .................................... GAGCGGTGCTTTTTCTGTATATGAGTCAAC 258628 36 100.0 30 .................................... CAGTGTATTCACTTTGAAGCATCACATTAG 258562 36 100.0 30 .................................... ATGATTGTACTAAGTGGCACGATTGGCGCA 258496 36 97.2 30 .............................T...... CGTATGAATTTCTTTACTGAACATCGCTGG 258430 36 97.2 30 .........................A.......... AATAGATACCTAAGGTAACCGTCCAGGTCA 258364 35 83.3 0 ...............T...G..G..A.....-...T | ========== ====== ====== ====== ==================================== =============================== ================== 33 36 99.2 30 GCTTTAGAAGTACTGCAAATCAATAGGGTCAAGAAC # Left flank : GACGCTCAATTTGAATACTTTATTTCAGCGAAAGTTGCAGAGTCAATTAATGAAATTACTGGCTGATGATGAGGTGGTGAAATTAGCGGATGGTCTCAGGGAATTGTTGTCTAAAATTTTGGCCGATAGCTACTTAATGGATGTCCCTCTGGAGTTGCCGGAAATTCCAGAGTTAGCGAAACTGGTCAAATTTAGTGGTATCCAGTTAACGCCAGACTTACAAGATGATGCCTATGGTATAATTGAGACATTAATCAAGGTACTAGTAGAGTTGAATGATCATCACATGATTGTTCTGACCAATGTTAGTCATTATCTTCAGGTCAGCCAGCTACAATTGCTGGTGAGGTTCATGGCTAACGTCGACTTGCCACTGCTTCTAATCGAATTTTCACCTAGTCAACGTAAAGACTATTTTAAAAAATGTGACTATCACTACATTGATAGCGATTTTGTTCTCTGGTAGTTTTTTATGATGAGATACTGGTGTGAAAACAACG # Right flank : CAAGGATACAAAATAAGTAATAGAACAAAAAACGACACGCAGCCAACCGGCCAGCGTGTCGTTTCATTTTGGTTAAGTATGCAATTACCCAGCGTAGGGCACAGGTTTACTGTAATAGTAACCCTGGGTCGTGCCGGCGTTGTATTTCTTTGCCAACGCCACGTCGCTTTGGTCCTCGATGCCTTCCAGCGTGAAGCCGAGCTGGTACATATCGGCAATCTTACGCCAGGAGCTGAGGCTCGGCAGCAATTCTTTTTGCCGGTGTTGGAGCCGGAAATTTTGCATGGCGAACTTGATATTGTCCATGAAGGGCAGGATATCTTGCACAGCTGGGCACCACGGATTGTCCGTGCCGACGTCATCCAAGCTCAATTTGATGTCAAACGCCCGGTACAGCGACACGTAACGGTGGAGTTCCTCCAGCAGAGGGGCTTCCGTCAATTCGACGATTAATTTCAAATTTTTGATGGATTTCTTCAAGTGGATCAAGTGGCCAATTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAAGTACTGCAAATCAATAGGGTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 2940-3090 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLM01000044.1 Levilactobacillus wangkuiensis strain 6-5(1) contig44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2940 29 100.0 32 ............................. GACCGTAAGCTCTTCCCTGCAGGTCGATAGGC 3001 29 100.0 32 ............................. AGTGCTATCCAGGTCTTGGATGACCGAGGGAT 3062 29 86.2 0 ........T.............C..AT.. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 GTATTCCCCACGGATGTGGGGGTGATCCT # Left flank : AATTGTGAACGACTTGCTAAAGGAGGGCTTGCTGGACGACCAAACGCCGCGATATTCCAGTATTCCGGGCCGGCGCGTGGGTAATTTCAAGTTCGTCATGCTGAATCAACAGTTCCAGGATCTGGGTGCGCAGGAGGACTTGCCAACGCTCGACCGGTTGTTGATTGGCGGGCGACTGTTGCTGCAGCGAATTTCATTGTCGCCACAACGCTGGTACGGCCTGGCCTTCAGCGATGTGGTCGAGGAGCGGGTACCGCTGTTCATCGGCCACCAGCCCGACCGGACTTTGCGGCGGAATCGGGTGGAGTAAGGTTAGAAAGTGTGAAGTCATCTTCGTTTTGAGCGAAGGTGACTTTTTATTATCAGATTTATTGCGGATTTGGCGGATGATGTTTTAGTAATTGTTAACGGTGTGTGACTGAGGTATGCTAGAGAAGCAAGTTAAAGGAAAATGGCACTTTTGGAAAAATGAAATCCCGGTGTGACAGCGTTTATTTAGT # Right flank : TAGTGTTATTTAGACTTGTCAGTGGGGTATCGGAATATAAGGTTGGCCTTTAACAATGCTAACAAGCCATAGCACCATATCAGTTGAAAGGGGCTGTGACATAAGTCTCCAAAATGAAAGCTGGTTGAGGAAAATCTTCGGATTTTCCTCAACCAGCTTTTTG # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGGATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 167268-167056 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLM01000006.1 Levilactobacillus wangkuiensis strain 6-5(1) contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 167267 29 100.0 32 ............................. ATCTAAATTTAAATTACGAAAATATGGAAAGG 167206 29 100.0 32 ............................. TGAGGTGGTCGATGCGATGCGTCAGCTTGACC 167145 29 100.0 32 ............................. TCTTTTTAAAGGTGTAAGTCCATCTAACCTTA 167084 29 79.3 0 .........A......T.....C...TAA | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 GTATTCCCCGCGGATGCGGGGGTGATCCT # Left flank : TAACTGAGCGAATTCATTTGAATGTCCATGATGCGTTTTCCGTTAAGCGTGGTGACACCGCTGATTTGAACGATGGTGCCTTTGAGAATAGTGAAGGCCTTTTTGTACTTGGTTTTAGCAAGAACAATTTTTTTCTTAGCTATCAAAAAATTCCCAGACTTGGCGTTGACGTAGCTGGTACTAGCCGCTGCTGTGACGCCACCGGTTAGGGCTAACCCGAGTCCAATTGCACCTATAGTAACTAGAATGTTCTTAAGTTTCATATGTAGCTCCTCCTAAAAGTGGCACCTTAACTACTCTAAGTATACGCTGTTGAGGTAAAAAAATCTGAGGTTAAACACTGAGAAATTGATGTTGGCTTAAAGTGGTTAAGGCTTTCGCTATAGCGGCAAAGAAATTGATTGTGGTTGGGGGAGGGCTGCTGTATGCTTGGAACACAAGTTAAATGAAAACCGGGTTGGGGTGATTTTTAAAGTGCGGTATGACGGCGTTTGCTTAGT # Right flank : TTGTAAGTCCAATTATTTGAATTAATGTGTCATTCAAAAGTAAGAAAGCTAAGTATTTCTCTATTTGTAGAATATGAGTACGAAAATATTTTTACATTTCGACAGTTAACGTTGTGCTATAATTATGGCGTGAGTTGGTAAGTAACAATCATTTCTAGATGGAGGGATATACAATGAAAATTAAACATCTTGTAGCTGCTGTCGCAGTATGTTTTGGTGTTGCGGGGATGGCTACGACTATATCAGCTGCACAGCCAGCGCGTGCCGTGACTACTAGTAATAAGAATTTTCGAAAGTATAAAACCATGCCGAAAGCTTTGCGTGGTACTTGGCAAACCAAGGGATACACTAAATATCGTAAGGGAATCAAGTCTAATGCTACATACAAATTTAATAAGAACTCATATACACTAATCATGAAGTTTAAAGGTGGTAGCGTAAAGTCTAAGACCATTCACTTCCCCAAGAACCAAGTTGGTGGTATGTGGTATGAGAAGCAA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGGATGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //