Array 1 45747-46554 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWPV01000045.1 Enterobacter roggenkampii strain GN1 Contig45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 45747 28 100.0 32 ............................ CACTTCTTTGGTCGGGAAATATTTGTTCAGAT 45807 28 100.0 32 ............................ ACTTGGGCGAGCAAGCGGTGTTAAATAAGGAA 45867 28 100.0 32 ............................ GAAGTGAGAACGAATAATTTCAGTATAACGAG 45927 28 100.0 32 ............................ ACGTTGTTGTGGCGTTAATACAGAAACATCAC 45987 28 100.0 33 ............................ GCTACCTTTGCCACCGCTTACGGCAACGGGATT 46048 28 100.0 32 ............................ TGCCGGAGCTGTCATTGAGTCACCTTCGACCA 46108 28 100.0 32 ............................ AGCGACTATTACGGATGGACGCAGCAACAGGC 46168 28 100.0 32 ............................ AGCCGTACAGCATCAGCGAAATCGGCGCACTG 46228 28 100.0 32 ............................ ACATGCTGGAGCTGGCAAAGAAAGAGCGCGAT 46288 28 100.0 32 ............................ ATCAGTATCGGGCTCATATCGTGCAGTAATAG 46348 28 100.0 32 ............................ TCCCGGGCATCTTCCTCCGTTGCCGTGTCCGT 46408 28 100.0 32 ............................ GTGTTCACGCGCGTAGACATCCACCAGCAGGG 46468 27 96.4 32 ..............-............. GCTTCGAGCGATGCCAGCGCAATACGCGCCAA 46527 28 96.4 0 ........T................... | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCTCTTTCACGGTTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGCATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCGTTGATTGGCGAAGTGGTGGCGCCGCTCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCAGTGGCGTTATTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTAAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : AGCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCGAATGCCGAACAGGCAGTAGGCACAACTTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGCTTATGCGAGGACCAAATCGCCCTGGGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGCACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGCTTTCACGTCTTCTTCCACGATAGCCATGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 61417-61925 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWPV01000045.1 Enterobacter roggenkampii strain GN1 Contig45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 61417 28 100.0 32 ............................ GTGTATAACTCAGCGTTTGACGCGTTTACAAC 61477 28 100.0 32 ............................ GTATGCAAGAAATGTTAAGCATTAGGGAGGAG 61537 28 100.0 32 ............................ AGAACGGGGTCGCTGGGGTTGTCGACCAGGTC 61597 28 100.0 32 ............................ ACTCTCGCAACCCGACTACCGCGCCTTTATCC 61657 28 100.0 32 ............................ TGAATGACCGCATTCTCCCGGCGCATTATGGA 61717 28 100.0 33 ............................ GATGAAGAGCGTGATGCGCTTCTGGCGCAGCGT 61778 28 100.0 32 ............................ TGCTAAGGGTGTGAAAATATCCGTCGGGATTG 61838 28 100.0 32 ............................ GCGCAGATTGCCGCCCGTCTCGGACGAACAGT 61898 28 75.0 0 ...........C.....T...AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 9 28 97.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGAGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAAGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTCTGATGCTAGCGTAACATATTGATTTATATGGTTATAATTTACGTCCCAGAAAAAGGGTTTTATGCGAAAAAGTTGATTATTTTGTTTGCTAACAATAGGATGGCGTTGTTTCCTTTCA # Right flank : AAAAACAACTCTCTATAACATTCAGCTTACCTATTTAAAATTTAATACTATCAAACCCACATTCTTTATTTTTCGCAATGAATAAAAAATTCATTCACATACCAATTATATTCCAATGAATATATTGTTCGTAAAAATAATGCATTAAATGAAAAAGTGATTTTTCACTTTATTATCGCGGTAATTACTCTTCATTTGATACCCGTCACATTTCTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACTTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTGACACAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 71421-72229 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWPV01000045.1 Enterobacter roggenkampii strain GN1 Contig45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 71421 28 100.0 32 ............................ TTTCTGAGGCCATGGAAGGCACGATGTGAAAT 71481 28 100.0 32 ............................ GTTCAGGATCGCGTTAATGCTGATTTCTATAA 71541 28 100.0 32 ............................ CAGAATATTTGGGCGGCGGTTCTATGGACATA 71601 28 100.0 33 ............................ CTTCGTGAGCACTGTCTTGCTTCCAAGCACGTT 71662 28 100.0 32 ............................ GGAGGCAGCGTAGATGATCACAACCAAACTGA 71722 28 100.0 32 ............................ AGCAGAGCCTGAGTCGGATTGGGTGACAGGGC 71782 28 100.0 32 ............................ ATATTTCCATCCGCCTGCTGGCGCAGACAACT 71842 28 100.0 32 ............................ TCAAAAAGGCGATGGCGTTGAGATTGCTCTCG 71902 28 100.0 32 ............................ AGCCCGGCACGTCCGTGGTTCAAGCTGGCTAC 71962 28 100.0 32 ............................ GCGTGCGGGGGATCTTCCCTGACGCGTCTGAG 72022 28 100.0 32 ............................ CAATGGAGGATGGAAATATGGCGATATTGCCG 72082 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 72142 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [72166] 72202 28 71.4 0 ....A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 14 28 96.7 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGTATAAGTATAGCCATTTGTCAGGATGGGTGGAATCGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAAGGTGTTTCGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGGTAAATAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGATTAACCCGACCTTTTAAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //