Array 1 350-51 **** Predicted by CRISPRDetect 2.4 *** >NZ_POYY01000187.1 Campylobacter concisus strain AAUH-9HCce 1106247, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 349 30 100.0 37 .............................. TTAGTGTGTAGAGAAATAGCGAAAATCATAAAAAGTG 282 30 100.0 38 .............................. TTTGTGCCAAAGAAAACATTTTTATCTAAATTTGCAAA 214 30 100.0 38 .............................. CATCTCTTTTTTGCTATCTTTTTTAATTCTGTAATAGC 146 30 100.0 36 .............................. GTTTCTAAAATATGCTGACGCTGCCCAACAATAACA 80 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 100.0 38 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGCTTTTTACACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGATTTTTAAGCCGATCTTGGGCGACACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAAGACTTCCAAACGGACGCCGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGCATCTGTGAGGACGCGCCCTATGAAGGCTTTGGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTGCACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAGCACCTATAAAATCAGCTTTTTGGTGCT # Right flank : CTAGTTGATTTTAAATTTGACGGAAGTTTATATATAGATTAGAATTTACTC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 2224-1259 **** Predicted by CRISPRDetect 2.4 *** >NZ_POYY01000037.1 Campylobacter concisus strain AAUH-9HCce 1106094, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2223 30 100.0 37 .............................. CTAGGTAATTCAGTATCAAAAAGATCTTTAAAATTTG 2156 30 100.0 36 .............................. AAAACGTATATGCTGAGCTAACAAGCGGGGATTTTG 2090 30 100.0 37 .............................. CATCAAAGCGGTTTAGCTTCTGCTTTTTCAACTGCAA 2023 30 100.0 35 .............................. CTTATAACTGGCTCAAAGCCTTGTTTTTGTTTCAG 1958 30 100.0 36 .............................. AATTAAATAATTCTCCGCTATTGCTAATAATATAGC 1892 30 100.0 37 .............................. TGGCTCATACCACTAAAGGCAACTAAAGACAAAGCCT 1825 30 100.0 35 .............................. CTTTGATAAAGCTCTTCCGCTTCCTCAAGCTCAGT 1760 30 100.0 39 .............................. CAGAATTGAAAAAAGGTAGCAAAAAGCGATGAAAACTTT 1691 30 100.0 37 .............................. AGGATAAGAAAAATGACAAAAGAGCAAAAAATACAAA 1624 30 100.0 38 .............................. ATAATAGAGAATAAACTTATAATATCAAAAAGACCTAA 1556 30 100.0 38 .............................. AACTTTGGTCGGTTAGGACGTCTTAGCCTCTTTTACTT 1488 30 100.0 38 .............................. TCATCGCTTTCACGTTTTGTGTAGGCATCGATCTTGTC 1420 30 100.0 36 .............................. GCAGATAGGCAAAATGTCCTTTGGTGTCCGTAAATT 1354 30 100.0 36 .............................. CCGCTTCCAGGATTGCCAATTAAATACGTAATCATT 1288 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 15 30 100.0 37 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : TTTTTAAATTTGACGGAAGTTTATATATA # Right flank : AACACATAAGCGACGATTTAATTTTCATAGAAGAGATTTAAATAATAGATCAAATAGACAACAATTGCTATCTTGCAAAGATGTATCAAAACAAACGATAATATTGTTTTATGCAGATACTTCGAAAAACCAAAACCCCAGCCAATACAGCAAAAAAAGAAACTAGAAATAATAATGAAATAGACTAAGCATAAACCAGCTTAATATCAAGAGCATTAACAACCTTAAATATACTTTCAAATCTAGGCTTTGAATTCTCTTTAAACATCTTATAAAAGCTTTCTCTATTTAAATTTGCTTTCTTTGCAACGTTTTCAATGCCTTTTGACTTTGCTATATAAAATAATGCTCTTTTAAATTCTTCAATATCTCCATCAGCTAGAACTTGATTTAAATACTCTTCTCTTAATTCATCAGTTGTTAAGTAGTCTTCTAAATTAAATTTTGTAAATTCTTCTTTCATCTATAATCCTTTAATATCTCTTTTGCTTTTTTAATAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //