Array 1 495081-486790 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072375.1 Prevotella denticola strain F0115 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ======================================================= ================== 495080 47 100.0 30 ............................................... GTCTATGGTGGTAAGCCCATCAAGACAGAC 495003 47 100.0 29 ............................................... TTACTGGCTTTGACTATATAACTTTCTGG 494927 47 100.0 29 ............................................... TTTCCGTGTATCTGTAAGTATTCTATTAC 494851 47 100.0 30 ............................................... CTTCGCCTAATAGTAACCCTTTCACGTTTT 494774 47 100.0 30 ............................................... ATGACCAAGCATGGCCATGGAAGCTAACGA 494697 47 100.0 30 ............................................... AAGAGCGTCGAGAGGTATATGATGCTATTT 494620 47 100.0 30 ............................................... CTGACCCGTCCTGTTGTCTATCTTGTATGT 494543 47 100.0 30 ............................................... TGGTCTGATATTATCATCTTCACACCCTTG 494466 47 100.0 31 ............................................... TTCTTGTCTCGTGGCAAGTATGGGTCTAATT 494388 47 100.0 55 ............................................... AACTCCTTCAGCATCTCCTCGCTGGTCTTCGTTGTGATCAATTCTCCGTTTTGAC 494286 47 100.0 30 ............................................... AGATTGGACAAAGAGCCTATCAGGTGCAGG 494209 47 100.0 30 ............................................... AAAACTCATTTGGTTGAAAATCAGCGGGTT 494132 47 100.0 29 ............................................... TGAAGTTTTTGCAACGTTTGATTGCGACC 494056 47 100.0 30 ............................................... CCACATCATCGCACACCTCTGCCACATCTT 493979 47 100.0 29 ............................................... TGTAAAAGCAAGGTCATAAGAGACAAGTT 493903 47 100.0 29 ............................................... CTGATACGTATTACAAGAATTAATAAGGA 493827 47 100.0 30 ............................................... TAGAAAGCATCTGGTAATTTTGAATCTGAT 493750 47 100.0 30 ............................................... TTTTTCAAAATGAGATATAGAGCGATATCC 493673 47 100.0 30 ............................................... CCGGCAGCACCTACGATTGCAGGAAGAAGA 493596 47 100.0 31 ............................................... CGACGCGAGGAGAGCCGGAAGTGACCCCTCC 493518 47 100.0 30 ............................................... TCCTGAATAAAGCCTCCTTATCAGACGCGT 493441 47 100.0 30 ............................................... CTATCAGGGTTGACAACGCCAGTAAAGAAC 493364 47 100.0 30 ............................................... CTACTCGTGATAGTTTTCTTGGATTCCATC 493287 47 100.0 30 ............................................... CGTTCTTGCTTGTTTCCGTCTTGATTGTTT 493210 47 100.0 30 ............................................... TTCACGTATAAAGTTTCCGCTTGGGTATTT 493133 47 100.0 30 ............................................... GTAAGAATCTTCAAGACAACATCAACAGGC 493056 47 100.0 29 ............................................... AACCGACAACATCAAAGCCTGCTAATTTA 492980 47 100.0 30 ............................................... GCAAGCGAGTACGTACAACGGTCGTGTACC 492903 47 100.0 29 ............................................... TGCTTTGAGTTCTTCCAAGCTGTGTCGGT 492827 47 100.0 30 ............................................... TCTCTGCTCCAATCTTTCGACACGTTGATA 492750 47 100.0 30 ............................................... CCGTTGTTGCTCTCTATCCACGCCTTTTGT 492673 47 100.0 30 ............................................... CCATACGGCTGACATTGGTTTGATTTCTGT 492596 47 100.0 30 ............................................... AAGTTAGAAGCAGACAAATCAACAGTAAGA 492519 47 100.0 30 ............................................... ACGATTGCTTTTGTCAACATTATCAAAACC 492442 47 100.0 31 ............................................... CCACGTTGACAAAGGATAAAAGCGGGGTTTT 492364 47 100.0 30 ............................................... AATGAGACGCAGGATTTATCATGTGAGCAT 492287 47 100.0 29 ............................................... TCTTATCGTCCTAAGGGTACACTGGAGAT 492211 47 100.0 30 ............................................... AAGAAACAGTAGGAACAGAAAAAGGCACAT 492134 47 100.0 30 ............................................... GTACAAGTTTTGTCGCATATTCATCAGCTC 492057 47 100.0 30 ............................................... CAGTTTGCCTTGCGCCTCTCTGCTTCTGCA 491980 47 100.0 29 ............................................... GTTCAATACGAAGTTGAATCGTGAAGATT 491904 47 100.0 30 ............................................... TCGATTGCTTTTGTCGACATTGTCAAAGCC 491827 47 100.0 30 ............................................... ACAAAACACAATTTTAAATAACTTAATCAT 491750 47 100.0 30 ............................................... AAATACTCGATAGGGTGTCGCTTTAACTCT 491673 47 100.0 31 ............................................... AAGGTCGCACCCAACAGACACCTCAACGTTT 491595 47 100.0 30 ............................................... TTAAGGTGCTAATCGCTGTGGGGGCTGAGC 491518 47 100.0 30 ............................................... AGATATCTGTCTGATTGAATGCGGATCTTT 491441 47 100.0 30 ............................................... CGATAAACATTCTTAAGAATCTTCAAAAGA 491364 47 100.0 29 ............................................... GTTAAAAGCGGATGTGCATCTTGAAAATA 491288 47 100.0 30 ............................................... ACGACCCCCACATAACAGCGATTGCAGGAA 491211 47 100.0 30 ............................................... ACCATTCTTATAAGAAATGGAATTAAAAAC 491134 47 100.0 30 ............................................... AAGCGCATGCATGTGCTGCCTCTTAGTATT 491057 47 100.0 30 ............................................... AGTCAAAGCGCCTGTAGCGGCAGAAATACC 490980 47 100.0 29 ............................................... GCAGAAATACCGCTACCAATGAGAGAACT 490904 47 100.0 30 ............................................... GGAAGACTGAGTGGAAGGATCAGGTTCAAA 490827 47 100.0 29 ............................................... TGGTATGTCACCTTAAATTTCAACTCACT 490751 47 100.0 30 ............................................... AATCAACGTTAAAAGATTCAACATCAGGAG 490674 47 100.0 30 ............................................... TTCAGCTTTTCGTTAGCCTTCTTCTTCTCA 490597 47 100.0 30 ............................................... GGCATAGTCAAAAGTCGAAGACGAAATTGA 490520 47 100.0 30 ............................................... TTAGGGGGTCGGTGGCAAGCACCTCCACAG 490443 47 100.0 29 ............................................... ACAAAAGAAAACTTGTTAACGCACTTAAT 490367 47 100.0 29 ............................................... TTGAAACTAAAAGAATCATCTGAAAAGCC 490291 47 100.0 30 ............................................... GCGACGATGCAGAGGAGTACCGCGTCGATA 490214 47 100.0 30 ............................................... CATCTCCACAGAGGGCATCCCCGCCAGCGT 490137 47 100.0 30 ............................................... TTCTCCTGCGTTGAGAACATCCAGGCCATC 490060 47 100.0 29 ............................................... ATGACCATCTTCGAGTTGAGCGACTTGTA 489984 47 100.0 30 ............................................... ACACGCCTCACTTACGTGCAGCGGTACTAC 489907 47 100.0 30 ............................................... AACAAAAACAAATTTGTTCAAACACTTAAT 489830 47 100.0 30 ............................................... AACAGGCACAGAAAGAGGTACATACTCTTT 489753 47 100.0 30 ............................................... CAAAAAAGAAATGAAATGCAAAATGAATTG 489676 47 100.0 29 ............................................... CGCCTACGGACTGAAAGGGTCATTTCTCG 489600 47 100.0 29 ............................................... CTCATGTCATAAGTCAAATGACCGTTAAC 489524 47 100.0 30 ............................................... CGTAACAGCGAACACGCTGTTGTAAACGTC 489447 47 100.0 30 ............................................... CTTAAAACTGAAAGAATCATCGGAAAAACC 489370 47 100.0 29 ............................................... CCTTTTTTGAAACTCATGTCATAGGTCGG 489294 47 100.0 30 ............................................... CTTAAATAAATCAAAAGAAGACCAAGAACC 489217 47 100.0 30 ............................................... TCGCAGCGCACCTCTGCGAGGCGGCAAAGC 489140 47 100.0 30 ............................................... TACATCTACTTCCTGCAATAGCTCTTGTGA 489063 47 100.0 30 ............................................... CTTTCCGTATGCGTTCAGCACCTTGTAGTT 488986 47 100.0 30 ............................................... CATCTACGACTTCATCCATGCCTACCGGCT 488909 47 100.0 30 ............................................... AGAAATTTGGCGTTAACGCCTTTGAGACGG 488832 47 100.0 30 ............................................... AGAGTTTGTCTTCGTTGTCATCTACCTTTA 488755 47 100.0 29 ............................................... GGTTGTCTCCTCGCCTGTGTTCACCACCA 488679 47 100.0 29 ............................................... GTCACCGTCTAAGATTTTATTTAAAATCT 488603 47 100.0 30 ............................................... GACAGGACAGCGTGAATACGTGCCTCTTTT 488526 47 100.0 29 ............................................... GCGAAGAGAGAGCAGCGACGCTTAAACCT 488450 47 100.0 30 ............................................... ATCTGAAAACTGCTCAAGACCAACACACCC 488373 47 100.0 29 ............................................... GTCACCGTCTAAGATTTTATTCAAAATCT 488297 47 100.0 29 ............................................... TGTATTCACGCATCAACTTCGTAGGGGTA 488221 47 100.0 31 ............................................... TTGCGCTATTACGAAATGATAACCGCAATAA 488143 47 100.0 30 ............................................... AAAAGAAGTAACAGAAGTAAAGAACATGCC 488066 47 100.0 30 ............................................... TTTCATAAAAAACATCACTCCTTCTTTCTT 487989 47 100.0 30 ............................................... GGGTATTTTGATGTCAAGCGTCCGCAGTGC 487912 47 100.0 30 ............................................... TGCGGGAAGCCTTTATCCCTGCAGCCTTGG 487835 47 100.0 30 ............................................... AGCCTCGCTGTAAAGAAGATATGGCGGATG 487758 47 100.0 30 ............................................... GGATTGGCATTATAGACAACAAGGTGCGAA 487681 47 100.0 30 ............................................... GCGTGGTTATGAATAACGTGTCGTTCTTCA 487604 47 100.0 30 ............................................... GCAAGCTGAGAAAGAATCAACTGCTTTTCA 487527 47 100.0 30 ............................................... CCTGAAAGCGGAAATGTTCAGACGGGTTGA 487450 47 100.0 30 ............................................... GGCAGCTCCGAAGTCTTCCATGTCGCATCG 487373 47 100.0 30 ............................................... GAGCAGCAGGAGTATTGTACTCATTCATCT 487296 47 100.0 30 ............................................... AGGGTTGACAGGAGAAACCGTATCGAAAAG 487219 47 100.0 29 ............................................... ACCTTAGCAAGAGTAGCCTTGAACATCTG 487143 47 100.0 30 ............................................... ATTGCCAAGCCAATCTACAGCACGTTCACC 487066 47 100.0 29 ............................................... ACTGGACAGCGTGAATACGTGCCACTTTC 486990 47 100.0 30 ............................................... ACCAATATGCTTCGAGCCAACACGGATATC 486913 47 100.0 30 ............................................... CTTGATGTGTTTGAAGAAGATAATGAACTT 486836 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ======================================================= ================== 108 47 100.0 30 GTTGTGAATTGCTTCAAAATGTGTATCTTTGCAGTAGCAAGCACAAT # Left flank : CAGTGTCTTGCTGTATAGGATAGTGACTGGATTAAACCGGCCTTTCCTGCAGATGTGCTGATGCCAGACACTTATGGAGTTGCCGACAGACACCGGGCGTGTTGATGGCCCGCACCATGCCATATATTGCCGGGAGGGGAGCCAACTTGCAGCTGGCGAAGAGCTGTGCCGGCAGAACTTATTTCATCAGGAGATTACTTTTCCGAAGACAATGCGGAATGGTCTGTTCAAAAGAGATTGCACAGGGGGATCATGCTGTTTGAGTTTTATCGGACAGCCTCCAATAAACATAAGTGCAGGAAACGGAGATGATTTATGGATTCGGCAAACGATCATCCCTTCGCAGCAAGCCTATACGCTCTACGCAGCAGCCAACTACACATTCCTGAAAGCCAACTACGCCATTCAACTGAAAGCCAGGAATAAATCTGTAAGGCAGCAGGCAAGACTGACCAAAAGTCAAAACACGAGTTTAGGTTTACAAAGTCGTCCGTTTGGTG # Right flank : TGAAAATAAGTATTGCTCTGATTCTCAGTTAGTAACATTGTCTTTGTGCAAAATAAAAACTGCAATCTAAAAGAGTCCTATTGGTAATGATAGGACTCTTTTTCTTTTAGAATAATTCAAGTTGCTGCCCAGGAGCGTTGGGTGTTTGTGCCTGTGCCCCACAAAAAAGCTCTATCTCACCAAACTGTTTGTCTGTAATAACCATAATGCAAACATTGCCAGAATTAGGCATAAAAGACTTTACTCGCTTCACATGTACATCCGCATTCTCTCTGCTTGCACAATGACGAACATAGATTGATAATTGAAACATAGTAAATCCATCTTTCATCAAATCTTTCCGGAAAATAGTATAAGCACGCTTTTCCTTGTTTGTATTAGTTGGAAGATCGAAAAAGACCATCACCCACATAACCCTATATTCGCTAAGTCGTTGCATCAAAGAAAAGAAGGATAAGAGATTTCACGAACTTCCCCATTATAGCACTTCGCAAGACTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTCAAAATGTGTATCTTTGCAGTAGCAAGCACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 604535-598035 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072375.1 Prevotella denticola strain F0115 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 604534 37 100.0 35 ..................................... GACGGTTTATAGACAGCTCCGCAAGGGCTTTGGGA 604462 37 100.0 33 ..................................... TGTCACGATGTAGTGTCTCTGCGGGCTTGCTTC 604392 37 100.0 34 ..................................... GTATAATTCAACAATAGTGTGTTATTAATATGAT 604321 37 100.0 34 ..................................... AGGAGTCTGCTTGGCAAGCCCTTGTCGGTTGGGT 604250 37 100.0 37 ..................................... AACGGAGGTAAGAGGAGTCTGCTTGGCAAGCCCTTGT 604176 37 100.0 39 ..................................... AGAGAGCTTTCTTGCTTCCCGTGGGTATAGCCTTTCAGT 604100 37 100.0 38 ..................................... AATACGTGAATGAAAGGGACACGGCGCAGCACCGCTCC 604025 37 100.0 38 ..................................... AAATGGGAAAAACAAGGATAACTTCCGAACAGGGAAAA 603950 37 100.0 33 ..................................... GGATATCTTACAAGATTATATTCTAGAAAAGTT 603880 37 100.0 35 ..................................... AAGGACATAAAAGCATGAAAGATTATCTAACAGAC 603808 37 100.0 35 ..................................... AAAAGTTGAAGTTCAGACATCTGATGGTGTTGACA 603736 37 100.0 34 ..................................... ACGCAATGAACAATTTCACAGTTACGGGGTATGT 603665 37 100.0 35 ..................................... AGAAAGAAGACACTTTGAAAGTCTTTTTATCTGTA 603593 37 100.0 38 ..................................... TTTGAGCAATGAAATACAATCAGAGAAATGAAGAGGCT 603518 37 100.0 36 ..................................... GCGGTACGCTTACTTTTAACAAATCTTAACATGAAA 603445 37 100.0 39 ..................................... AGCGAAAAATATGAAGCTAAACGAAATTGCAAGAATCAA 603369 37 100.0 33 ..................................... ATAAAGAAAGTTAGAATACAAAAGTTTATGTCT 603299 37 100.0 36 ..................................... AAAAAATTACAATTATGAACGCAATGAACAATTTCA 603226 37 100.0 35 ..................................... CACAGAGGGCGACCGTTCAGATGCGGATGCAATCG 603154 37 100.0 33 ..................................... TCAATATAAATCATAAAACAAAATATGGAAAAT 603084 37 100.0 38 ..................................... ACTGCAAGAAGATTTCGGCAGTCAAAGGCAGTTTAACA 603009 37 100.0 35 ..................................... TTGGCATACAAGATAAAAGATGAATTTTTAAGAGT 602937 37 100.0 36 ..................................... ACGGCATTGTCGTCGATGTCATGGCGTATATGTTCA 602864 37 100.0 29 ..................................... CCAGCCGTGAAAGTTGGTAAAAAATCGTT 602798 37 100.0 35 ..................................... CTATTAAGGTTGAGATTCAGGATGCCCGAAATCAA 602726 37 100.0 36 ..................................... CACGGTCAAGTCAGTTTTTTATGGAGACAATTACAA 602653 37 100.0 30 ..................................... TCTGTATTCCATTCAAGAAAACGGACACGC 602586 37 100.0 37 ..................................... ACTTAAATGCTGCAGGCGGTTTGCGTTCTATTATGCA 602512 37 100.0 37 ..................................... AGGCACTTTATTTTATCTTTGACTTATTGCAACAACA 602438 37 100.0 35 ..................................... AAGCGGTGCTATTATGACAAATTCAACTAAACAAG 602366 37 100.0 37 ..................................... TCGGAATTCTTACAACTGGGAGTTTGTTATTATCTCC 602292 37 100.0 33 ..................................... AAGCTGGAACTCAAAGACAAGGCTCGCAAGGAC 602222 37 100.0 41 ..................................... CTCATTGAGTGCCCAAAAACAAACTTCATAAACACTATTGT 602144 37 100.0 34 ..................................... CGCTGAAGCCTTCCAGGAGGTCGACATAGACGAG 602073 37 100.0 35 ..................................... TGATAAATTTCACTGAACTTCGAGAAAAGGCTATG 602001 37 100.0 35 ..................................... TACAAACCAAAGAGCGAAAGAGAGCGTTACGTGAA 601929 37 100.0 36 ..................................... TTCCGCCTTGATTTCCGAAAGCCTTTTCAAGGCAAT 601856 37 100.0 36 ..................................... GGTGCGTGCGTTGTGCTTTGGTGTTGGGTTTAGAAT 601783 37 100.0 37 ..................................... TTGAATGATGGCAGAACGTTCGCCAGCGAGGGGCTGG 601709 37 100.0 35 ..................................... ATGACGACATTTAAGAATTTCACGCCCCATGCCAT 601637 37 100.0 36 ..................................... AAAAAATTACAATTATGAACGCAATGAACAATTTCA 601564 37 100.0 35 ..................................... ACAATAATGGCAACATTTAATACTGCTTTTGCTTA 601492 37 100.0 37 ..................................... GAGTTGTTGCAGATGACCACACTGAACAGCTTAGATG 601418 37 100.0 37 ..................................... AATGTAGTGCAGATTATCTTTTCGGTTTAAGCAATGA 601344 37 100.0 36 ..................................... AGGACTTGCTAAAATCGAAATGACAGCAAAGCAAGA 601271 37 100.0 37 ..................................... CCCTCCCTGCCTTTTGGCGGTACACTTACTTTACGTA 601197 37 100.0 31 ..................................... TTCAACGAGTCTAACGGAGTAACGCGCGCGC 601129 37 100.0 34 ..................................... CATTTGGATGTGACGAGCCCGTGGGCGGTGACGA 601058 37 100.0 34 ..................................... GCTAGGGTATCCTCCGTGGAGATACCAGAGCCAC 600987 37 100.0 40 ..................................... ACTTGTCTTCACATTTGGATGTGACGAGCCCGTGGGCGGT 600910 37 100.0 36 ..................................... ACTCGCCGAATTTAATTCCGCCAACAACGTTACGAG 600837 37 100.0 39 ..................................... ACTCGTGTACGAGTTAGATTTAGATTCGATGGTAACGAC 600761 37 100.0 34 ..................................... TATTCGGTTATAATCGATATAACCGATATGGGAA 600690 37 100.0 30 ..................................... TCTTTTAAATTATGACAGTATTAAAGAACT 600623 37 100.0 39 ..................................... ACAACGTGGTACGCGCACGTTTGGTATTTTCTTTTTCGT 600547 37 100.0 36 ..................................... TCCAATATATCCGCATTAAAGGATAAGATTTTATTT 600474 37 100.0 34 ..................................... TTAATTCCTATTTCTTTTAATCGCAAGATTTTAA 600403 37 100.0 34 ..................................... AAACAGATTCCTTACGAACATCTTTAGCAGCTAC 600332 37 100.0 33 ..................................... AAAGACAGATAAGGCAAAGGTGCTTTTGAAGTC 600262 37 100.0 34 ..................................... TTTGTCTCTTCTAATAAATCATTGTATGGCGAAC 600191 37 100.0 34 ..................................... AGGTTACGTTATGGAGTTAACAAAGAATTTCGCT 600120 37 100.0 40 ..................................... TACTCTCAATACAAAGAGCATGCGACATTCTGCAAAGGAG 600043 37 100.0 36 ..................................... AGATGGAAAAAATCATGTCCGGAACCGGGAAAGTCC 599970 37 100.0 35 ..................................... AAATGAATATGAAAAAGTTAGAAAAGTTTTTCGAC 599898 37 100.0 35 ..................................... TGGAGAAAAATCTCTGCTTGCTCTTTTCTTTTCAT 599826 37 100.0 37 ..................................... TTGTCTACAAGTGCTAAGAGAGTAAACTCCTTGACAG 599752 37 100.0 36 ..................................... AAGTCAAAGTTCTTGGTTCTCACAGTACGTGATGAA 599679 37 100.0 35 ..................................... ATATAACTATATTGTTTATCAAACAGGTGTTCATG 599607 37 100.0 35 ..................................... TCATTTCGCATTCCTTTCTGCTGAATTTCGTATGC 599535 37 100.0 37 ..................................... GAGTCCGGCGTTGATGATCGGCACCGGTGCTACCTGT 599461 37 100.0 38 ..................................... CTACAAGATACAATGAATTTAGCTAAGGCACGCGTTCA 599386 37 100.0 37 ..................................... TGCTCGTACAGGCAATCAAACCTATTCGGTTATAATC 599312 37 100.0 33 ..................................... AAATCGTGACATCGAGAACGGTAACCTTGAATT 599242 37 100.0 38 ..................................... GTTTAACACATTTTTGATATGCGAATTAAACAAGGATT 599167 37 100.0 37 ..................................... TCAACGGTTGGCGGAGGTTAATAAATGGCCTTTTACA 599093 37 100.0 36 ..................................... AGAGTAAAACAAGGATTAGCGCGAGTATCTTCGATG 599020 37 100.0 35 ..................................... AGTATCTTCGATGGAGATACCAGAGGCATTGGCGG 598948 37 100.0 35 ..................................... ATTCTGCCAACGGCGTTACAAGAGCAAGGCTCGTC 598876 37 100.0 33 ..................................... TAGCCTCTTAACCCCTGCCAGCCTCAACGGTTG 598806 37 100.0 38 ..................................... TTTAACACAATGAGAGTAAAACAAGGATTAGCGCGAGT 598731 37 100.0 46 ..................................... AATGAGAGTAAAACAAGGATTAGCGCGAGTATCTTGTCTTAATCCT 598648 37 100.0 37 ..................................... GGAACAATTGCACAACAGACCGTGCAGCGGAGACCAA 598574 37 100.0 35 ..................................... AAGAGCACGGCTTGTCTTCACATTTGGAAGTGACG 598502 37 100.0 35 ..................................... TATAATCGATATAACTGATATGGGTGCAAACGAAA 598430 37 100.0 37 ..................................... TATTACCGCTAATTTGGTTGCGAGAACAGGCAACCAC 598356 37 100.0 34 ..................................... CTTTTGGGTAGTACGTTTACTTTTACAAGATTCA 598285 37 100.0 36 ..................................... ACCGGAGGCGCTGTCGGATTTCAATGATGTCAACAA 598212 37 100.0 33 ..................................... TGCACTATCTGACCCATACGTGGGTACTTCTGC 598142 37 100.0 34 ..................................... CGAGTTGCAGGAACGTAATGTTAACCTTGAAAGT 598071 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 90 37 100.0 36 GTCTTAATCCTTGTTTTAATGGAAGATACTCATTGAG # Left flank : TTCTCGGAGATAGTCTGCCCCGCAGCCGGCATCACATCATAGAAAAAGCCGTTCTCCACTGCCGGGCCGAAGCCGAACTGAATGCCCGGATAGAGTTCCTGCAATGCCTCGGCAAGCAGATGGGCAGAGGTGTGCCAGAAAGTGTGCTTGCCTTCTTCGTCATCGAACTTGTACAGGGCAATGGTCGCATCTCCGTTGATGGGACGGTTCAGTTCTGTCGTTACGCCATTGACACCGCAAGATACAACGTCACGGGCGAGAGCCGGCGAAATACTCTCGGCGATTTGATAACCAGTCACACCCTGTTCGTATTCACGAACAGAGCCGTCTGGGAAAGTGATTTTAACCATACTACAAATTAGTTTTATAAATCAAATGTTGTGGCAAAGGTACTACTTTTAATTTATAAATCATAATTCTTTTGCCCCAAAAGGCTCTTCTTCCGAATCCTTGTTCTAATATTGAGTGAAGGTTGAGGACGCAAAGCGAATTCTTGCAAA # Right flank : AGTAAAGACTTGTATTCCTTTATATGCCGCAGCCCCATGCGTGTAAGACCTAAAAATGCTTGAGGAATTAAGAGAAATTAACCATATTCCAAGCGAGTGCAAAGGTACGAAAAACTGTGCAGAAAGTCAAAGAGCGATGCGTTAAATATTCTTTATGGAGGAAGCATTGCTGCTGCTTTCCCTCATGGGGAGGACGTTCTTCCCTGTTGTAGAAGGTATCCTCGCTGCCATCTTCAGAAGAACAATGTGTTGCGCGAACGGATGATGACATCTATGCTGATGTCTTCACCGATGATCTGCATTGCCCGGATCTGATCGGTGGAGACAGGACAGACGATGATGCTGTCGTGGTTGTCGTAAAGCGACTGCACCTCGGCAAGGTCTCTTTTAATTTCATCGTAGACGGTCTTGTCGAGGTCGGCAAGGAAGATGGAACGCTGGATGCGTGTGCATCCTTTCCGTTCCAGGTATTTTGCGATATGATAGCGTACCTTGTCGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCATTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 1141192-1140950 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072375.1 Prevotella denticola strain F0115 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================== ================== 1141191 35 97.1 34 ..........................A........ TCTACAAGCTACGAAAGCAAACCCTTCAATTGTC 1141122 35 100.0 34 ................................... GTAACAACCTGCGAAAGCATAGTCGCCAATTTTT 1141053 35 100.0 34 ................................... GTAACAACCTGCGAAAGCATAGTCGCTAATTTTT 1140984 35 94.3 0 ................................A.A | ========== ====== ====== ====== =================================== ================================== ================== 4 35 97.9 34 GTAACACTATTTGGAATGGTTACAGAGGTTAGCGC # Left flank : ATCCACTTCCAAAGGTAAAGTTCTTTAGACTACTACAAGCAGAGAAAGCCCATTTGCCAATGTTATTACCAGCTTTTATGTCTACAGATACAAGATTAGTGTATCTGCTAAAGGCATTATCGCCAATACTCCCATTTATATCGATGTAAGCTTTCTTTATATTTGCACACCCATAGGCTGTATAAGGATTAATATCTCTGACTGTCATGTCAATACCCTTATAGTTGACTTTTTTGTTAATTTTAACTTCGTAAGGATCTCCAGTGTAAATGCAATCTAAAGCGTCACAAGTGCGCTCTGATACGGGAACATATTTGACACCGTTCACCTCAAAAATAGAACTTAAATAAGGATATACCTTTTTATTGAATAAATCCGTATACAAATTATTGGCAACATAATGAATGGCACCTGTCACATTACTATATCCAGCAGGAGGAGTATTAGTTAGCCATATTATTTTGGCATTATTATTAGTAAAAGCTTCGTCTTCAATTTTT # Right flank : GCTACATCAAGAGAAAGTATTATTAGTTGATTATCAGTATTATACGCTCTAAACGGTAGAAAAGTGACTGTGTAGATTCTGTTTAGATACGAAAAGGTAATAATTTAACGTATTTAACTTTCAATCACATCAAGAATCACGGAATAAGGTTTGGGAGGGGCGCTTTTAACCGACCTCATAATGTGGTGAATGGAAGTTATAGGACGAAATTCATAAAGGGGTACGGTTGAAACGACTCCTTTGAACGTAGGGTGTAATTACATGTCAGCCCCTTTGTTCTAAAAAGCATTTTTGTGTAGTTTACGATGCTACGTTTTAGTGTTTTTTACTTGATAAACGCAGTTTTTTTATTGATTGTGCTGGCTTTGGGGATAAAACCATTATCTTTGCGGTGTAAAATATGATACCAATATCAAAAATAGCACTATAATATGATATTTGAACGTAAGAAATACTTGGATGAACTTATTGCAGGACGTGGGAATGGACTTGTGAAGATT # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACACTATTTGGAATGGTTACAGAGGTTAGCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //