Array 1 257260-256681 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZXF01000005.1 Nocardiopsis sp. CNT312 B042DRAFT_scaffold_1.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 257259 30 96.7 31 .............................T TCCGCCCCGCTACCGACAAGCCTTCTACGGC 257198 30 100.0 31 .............................. ACACCAAAGCAGCGGCGTCCCAGGCCGGTCA 257137 30 96.7 31 .............................C CACCGTGCCCGACGTGCTGCGCATCCTGGAC 257076 30 96.7 31 .............................C CACCGTGCCCGACGTGTTGCGCATCCTGGAC 257015 30 100.0 31 .............................. CTCGGCGTCTCGGCGGGAGCGGTAGTCGTTG 256954 30 100.0 31 .............................. TGAAAGGGCGGTGGGTTCGGCCCCCGGGGGA 256893 30 96.7 31 .............................A GGCGAGGTTCCGCAGCACCTGGTCGTCGTGG 256832 30 96.7 31 .............................A GCCCCAAGGCGGCCCGCGACTACATCGAAGG 256771 30 100.0 31 .............................. CGGATGGAGGCATGTCCGCACGGAAAGCGTG 256710 30 93.3 0 .........................G...A | ========== ====== ====== ====== ============================== =============================== ================== 10 30 97.7 31 GTGAGCCCCGCGCACGCGGGGATGGACCCG # Left flank : CGAGATGCTGTATGACCGCGTGCACTCCCAGGCGCTCAGCGTCGATGCCTCTCGCGCGTTCATGCACGACCTGATCGAGTAGAGGACACCATGTTTACCGACCCATCCCGCCTGCGATTCCGCAAGTCGTCCTACTCCAGCGCACGCGGGGAGAACTGCGTGGAGATCGCCGAACTTCCCGGTGGCGCAGCCGTTCGCGACACCCAGAACCGCGAGGCGGGGCACCTGGCGTTCCCCAACTCTGAATGGGTGGCCCTGCTGTCCATAGCGCGGAACCGCAACCTGTAGCACAAACGACGGAACCCCCAGTCGATAAGACCGGGGGTTCCGTCGTGCTTACCTAAGCAATCCCGAGCCGAGTCTATCGGCCAGGGCGGCGAGCGGCCAGGTGCCGAGCCTATAGGGCTGCGTGCGAGAGCCCGGGGCGATACGGTTGAGGTCAGGCCACACAGCCGATATCACAAGAAGATAAAGCGCTGCGTTGTTCCAGGTCGTTAAGG # Right flank : CCGCTCAGGACGGCTCGTCGGCGCGCCGCCGCTCCAAGTGTTCGGCGAGCTCGTCGGTGACCAGCAGGTCCTCCCGGATCCGCCCCGAACGGTAGGCCACCCGGGCCGCGATGTGGCCGGCGACGGGCACCGTCATGATCTGGAACAGACCCACTAGGAGCAGGGTGCCCACGTTGAACACCCCGGTCTCCACCGGGGCGATGCGCAGACCGATCCCCACCAGGACGAGGAGCAGCCCGAGCACCTGGGGCTTGGCGGCGGTGTGCATCCGCGAGAGCAGGTCGGGAAAGCGCACCAGGCCCACCCCCGCGACCAGGGACAGCAGCGCCCCCGCCACAAGGCACAGCACCGCGATCCAGTCCAGCACCGCGATCATCTGATCGCTCACGGGGTCCTCCCCTCAGCGTCGCCGCCACGGGGACCGGCCGCCCCCGGGTGCTCGTCGAGGTGGCGGCGGACCACGAACATCGAGATGGCGATCGAGCTGACGAAGCCGACGA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCGCGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 57351-57685 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZXF01000032.1 Nocardiopsis sp. CNT312 B042DRAFT_scaffold_26.27_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 57351 30 100.0 31 .............................. AGCAGTGGTCGCAGATCCAGTCCCTCAACCT 57412 30 96.7 31 .............................C GCGCCATCTGCTGGGCGGCCTCCTCCACCGT 57473 30 100.0 31 .............................. GAGCGCCGAAACGGAGCCGAGGGGGGGAGTC 57534 30 96.7 31 .............................A GTGCATCCTCACTCTCATGGCCGCCGCCGAG 57595 30 96.7 31 .............................T ACAACTAGCCCTCGACCCCAACCCCAGCGCG 57656 30 86.7 0 .......................A..GAA. | ========== ====== ====== ====== ============================== =============================== ================== 6 30 96.1 31 CTGCTCCCCGCGCACGCGGGGATGGACCCG # Left flank : CCCGCGACCCAGGGATTATGAGTCCACACACCCTCACATCAGCGCATGCGGCCTGACCTGCGCTCCTCCCCCACCCCCGTCAGTGGGCGCGAAAACTTCAACGTGTATTCCCCGTGGGGGCGCGATGAAGTGCCTCGCGGAGCCCTCTCTCAGACCAGGGAAGCGTTCGCCCGCCCTCTCCCCTGACAAGGTGCCCCCCATGGCTAGCCATTCGGGGGGCTCCTGTACGTCTTCTTTCTTTAGAGAGTTAGGAGAAGGAGCCTCCGCAGCCTCCGCAGTCGCGGGCGAACAACGGCTGACGTGCGGAAACGGGGCGGAGGCTAAGCGAAGACTCCAGCCTCCTGGCAGCCTCCGCAGACTCCGTGTAGCCTCCGCAGTAGCCGCCATTGGTGGCCGATTCGAGCGAAGCAGCCTGGCAGGCAAGGGTGCGCGAAATGTCCGTTTCTGAACAACTTGCAGATTCGAGGGGTTCACTCGGATAAAATTGCTGGTCAGGAAGA # Right flank : CAAGGCCTGTGGCAGTAAGAAGCTCGGGCGCGTGGCCCGAGCTTCTCATTACTGAGCTTTAATTCGTGGTGTTACGGCTCCAAGGACAACCCGGTCCCGGCAAGACACCCCTCGAGCAACTCGGGGCGGTACTGCATGGGTCTGAGCCGGGCACGGATCAGGGCGGCGAGCTGGTCGATACCGCCGGGGACCAGGTTGGCCAGACCGCTGCGCATCGCCGACCACACCCCCTCGACCGGGTTCAGGTCGGGGGCGTAACCAGGCAACTGCTCGACGGCCAGCCACTCCCGCTCTGCGACGCGGCGCCGCATGTCCGCGCTGGTGTGCCGGT # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 58093-57636 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZXF01000010.1 Nocardiopsis sp. CNT312 B042DRAFT_scaffold_4.5_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 58092 30 96.7 31 T............................. AATGCCACTGAGCCGATTAAGGTTCTGCTCA 58031 30 96.7 31 T............................. GTTATGCAGTATTGGCAGACGCGTTCTCGAC 57970 30 93.3 31 T............................A TTGTCGCTCTCACCCCGTTCCTGTAGGCGCT 57909 30 93.3 31 ............................TC TGCGCAGCTTCAAGATCGGCCACGCCCGGCG 57848 30 100.0 31 .............................. TGGCCGCGACGCTTCGTCATGCGGTGTCTCT 57787 30 96.7 31 .............................G CGCTGCGCGGCTGCATCCAGGACGCCGCGAA 57726 30 100.0 31 .............................. TCCTTCAAGCCAACACCGACCCGAAGAAGCG 57665 30 90.0 0 .....................G...G..A. | ========== ====== ====== ====== ============================== =============================== ================== 8 30 95.8 31 CTGCTCCCCGCGCACGCGGGGATGGACCCT # Left flank : GTGCGCGCTCGGGGGTGTGTCCGTGGGTGCTTCTCGCGAGCGAGAGGGAGGTTCTGTCATGGCGAAGTTCATCGCCATCGGATACGGGGACCGGGACGGCTACGACCGCACTGACGCGGTGGTCCGGGACGAGGCACACGCGCACGACGCCCGCCTGTGTGAGGCCGGGGCCCTCATGGGCGTCGCCGAAGCGCCTGTGCAGGTGAGCAACCACGGCGGCGCTGGTATCACGGTGGGGCACGGCCCCTTCATGTCCTCGGCGCTTCCGGTGGCCGGGTTCACGGTCATCGAGGCCGCGACCGTCGAGGAGGCCGCCGAGCTCGTGTCGAAGACCCCGTGCGCGGTCGCCCAGGGCGTGGTCGAGGTCTGGCCGTTGCGGGCATAGCCGTAAAACGTTTGGGTCTTATGACGCATGGAGGATGTAAATGTGTGAGATGTCTGTTTCTCGGCAACTTGCATATTCGAGGGGTGCACGCGGATAGAATTGCAGCTCAGAAAGG # Right flank : GACCGGAATCGATGGCTTTGTCGCGGGCTCCTGATATCCATGTGGACAGTCCCGCCCCTCCACGTACGAGGTGCCTCCCATGCGACGTCCCCCGCTGCCCCCTCCCTTCCCTGGCACGAGCGAGGAGGCACTCCCGGGCCTCCTGGTGGTGCGCACGGCCTTCGACGATCAGGACGCGTGGCGGAACACCCTTGCGCACCTGATCGACCTGCCCGGTGTGTATCCGTCCCCCCAGGGTGGGGACGACGGGATCGCCCACACGCGGGAGGACAGGATCTTGTTCCTGGTCGACGATCCCGCCTGGCGGGACGCCACCATCGCCGAGATCGCCTCGGCATGGGAACAGGCCGGCCCCTGGCGCCCGGAACTGGTGCTGCTGGCCGACGGCCGCACGATGGACGATCCCGTGCACCGCCCCCTCCTCGCCTTCATGCCCTTTCCCGAGGGCAACGAGTCACGAGAGGAACCTTTCCTCCCCTGCGAGAGTGTGATGCGGATCG # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 66149-65692 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZXF01000011.1 Nocardiopsis sp. CNT312 B042DRAFT_scaffold_5.6_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 66148 30 93.3 31 ............................CA CCGCTGCCCATCAACGAGACCGCCTCCGAGG 66087 30 100.0 31 .............................. CGGGCCGATGGACGTGGCCCAGTTCGTCATC 66026 30 96.7 31 .............................T GGTATACGTCCGGCGTCGGGTGACCCGACTC 65965 30 93.3 31 ............................CA CCACGTTGCCCAGGTGGACGTCGCGGTGGTG 65904 30 96.7 31 .............................A TATATAGTGCTGACCTCGGGTCGAGTGACTG 65843 30 100.0 31 .............................. CATCCGAGCTATGGACGGATTTTCTTGACCA 65782 30 93.3 31 ............................CT TGCGCCACCGGGCGCGCATGCGCTTGCCCGC 65721 30 80.0 0 .......................ACGG.GG | ========== ====== ====== ====== ============================== =============================== ================== 8 30 94.2 31 CTGCTCCCCGCGCACGCGGGGATGGACCTC # Left flank : GGGACGAGGCTCACAAGCGCCTCTGGCCCTGACCGCGCCCGCACCGTGCGGCCCCGCCGAGACCGGCGGGGCCGCACGGTGTTCTGTTGATGGTGTCTTTCGTGGCTTTCATCCTTATTCAGGGGAGAGTCCTTTTCTTGCGTGATGCCTCCTCCCGGATCTGGCCGATACCATGCTCCCTTCGGGGCTCATGCTCACTTCGTGAATGTTCCTTCTTGAAAACTTCTGTGTACCACGAGCCCGGCGCGGAGTTCTTCGAGCTGCGACTGACCCGGGGCGAGCACAAGGGGAGGGCGTTCGCCTGGGGAATGGAGTTGCCCGACGGTTGCGTGCCGAGCTCGTGTGGCTGTAGGCGGTGGCCAGGCTGGTGCCCACCACGGGCACCAGCCGAAAGTAGAGTGGGTTATTTGTGGTTTGTGGGGGGTTTGGTCTCTGTGTCTGTTTTTCGACAACTTGCAGATTCGGGCTGTCTGGCGATATAAAGTCCCAGGTCAATAAGG # Right flank : ACGGGGACGCCGGTGGTTCCCTGTCGGTCTCCGACACGGCATCCTGGGGAGGAGCGCCCGTTTCCCCCGAAAACCCCCATACCGGTCCCCTGTCCCGTGCGGCGCTCAGGGGCAGCACGGGCCTGAGGAAAGAGCTTCGTGAACTTCAAGCGCATGCTCGCGACCGTCGGCATCGGCGGAGCCACCGTGGAGTCCACGCTGGACAGCGATCGCGTCGAGCCGGGCGGTACCGTCTCCGGCACCATCAAGGTCACCGCGGGCAAGGTCGCCCAGACCGTCGAAGGTGTCACCGTCGGCCTGCGCGCCACCGTGGAGAAGGACATCACCTACAAGAACCTCGAAGGTGAGAAGTCCAAGCGCGAGCTCAACGTCGACGTGGTGGTCGCCAAGAACGCCGTCAGCGAGGCGGTGGTGACGCTGGAGCCGGGGCAGGAGCTGGAGCTGCCCTTCGAACTGGCCATCCCCATGGAGGCGCCGGTCACCTCGTTCAACAGCATCCG # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 41234-42730 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZXF01000015.1 Nocardiopsis sp. CNT312 B042DRAFT_scaffold_9.10_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 41234 30 96.7 31 .............................T CTGTTCGTAGCATCAGTTCTAGCAGCTGGAT 41295 30 93.3 31 ............................TA CCCAAGCTACGCCAACGCCTGCAACGATGAC 41356 30 96.7 31 .............................G CCTGCAACGATGACAGCGATCCACCCCCAAA 41417 30 100.0 31 .............................. ACATCGAAAAATGGGAGCCGGAGCGCGGTGA 41478 30 100.0 31 .............................. AGAGTTCGCCGTCGTGGTCGCGGGCGAGGTC 41539 30 96.7 32 .............................A CCTCCAGGGCGCGGGCCACCACGTCGGGCACC 41601 30 100.0 31 .............................. TGCTCCTGGACGAACTCGCCCTCGACGCAGA 41662 30 100.0 31 .............................. TATTCGCTCATGGGTAGAGGACAGGCTGTAG 41723 30 96.7 31 .............................T GGCCGCGACCGGAGGGGTCTACGTGCCGCGC 41784 30 100.0 32 .............................. CTGTTCCTGAAGACGAACCGCCGGAACCTGGT 41846 30 96.7 31 .............................A CCTCTAGCCGTCTAGAGGTCGAAGGTAATTT 41907 30 96.7 31 .............................G CCGCCCTGGCCGAGCTGATCGGCCGCACCGG 41968 30 96.7 31 .............................G TGACGGTCTCGGAGTCGGGCAGCTCCACCGA 42029 30 100.0 31 .............................. GGCCGCCGATCGCAGCCGGACGGATGCCCTC 42090 30 100.0 32 .............................. CTCCGGCCGCGCCGTCCCGTGGGGGGTGCACA 42152 30 96.7 31 ............................T. ACCGACGTGATCACCCAGGTCCGTCGTCTTG 42213 30 100.0 31 .............................. GCGCCGGTGAACGGCTCGTCGGCCTGGACAC 42274 30 93.3 31 ............................TG AACCGCCGGTTCGACCACCACCCGCCCAACG 42335 30 93.3 31 ............................TG AACCGCCGGTTCGACCACCACCCGCCCAACG 42396 30 93.3 31 ............................TT CATTTCAGGCATACTGGACACGTCATTACCT 42457 30 96.7 31 .............................A ACTTGTGGGTCAGCTTCTTTAAGATCACGGA 42518 30 93.3 31 ............................GA AGCGGGTGCCGTGCGGGCGTCCACACAGATC 42579 30 100.0 31 .............................. GGCCGTGCGGTGAGCGCCCAACAGCACCCTC 42640 30 93.3 31 ............................GG AGCGCGAGCTGGCCGCCACCAAGGCCCTGCT 42701 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================ ================== 25 30 97.2 31 CTGCTCCCCGCGCACGCGGGGATGGACCCC # Left flank : TACAGACCGACGATGGTGTGGACATTCCCGGAGGCAGGAACTACGGGGTGATGTGGTGACGGTCATCGTCCTGACGACATGTTCGGCCGGTCTGCGTGGCCTGCTCACCCGTTGGCTGCTGGAGATCTCCCCCGGGGTCTTCGTCGGTGGGCCGTCCGCACGCGTTCGGGAGGTCCTGTGGGGGGAGGTGCAGGCGTACGCGGGCAACGGCCGAGCGCTGTTGGTCTACTCGACCAACAGCGAGCAAGGCTTCACTTTTGAGACTTTCGATCACAAATGGGAACCGGTGGACCATGAGGGGATGATGCTGATCCAGCGCCCGCGGGCGAAGAGCGCCGATGCCGCCCAGGTGAAGAAGGGGTGGAGCAAGGCATCGAAGCGTCGAAGGTTTGGTCGATGATGCGTTTTTGGGGGTAGTGGACTTTATGTTCCTTTTGTCTGTCTCTCGACAGTTTGCAAATTCGGCCCCTCTGCGAGTATAAAGACGCAGGTCAGCAAGA # Right flank : CCCGTTCCTGCGTGGCCGGCGTGTCCGCTATCCCAAGGTGGCGGGTCGCCGGGCCGAGCCCGGACCGGGCGGGGCGCCGGTGTCGTTGCCGAAGGCCCGAGCCCTCCCGTCGTCCACCCGCTGCCCTCGAACCCGCCTCCTGCTCTTGTGCGCTCTGTGCTCACCCGCTGCTGAGGACCATGTGGTTGCCTTCGCTGTCGCGGAACTCGGCGACCGTGGTGCCCGGCTGCCAGGGGGCCTCCTGCGGCTCGGTGGTGATCTCGACACCCTTGTCCCGGAGGCTCTCGACGGTGGCCCCGACGTTCTCGACCACCAGCACCATGACGGGCTCCTCGGAGGGCTTCTCGTCGGGGCGTCGGTTGAAGTGCAGGGTGGTCGTCGCCCCGGGAAGGCCGAGTTCGATCCACCGCCACCCGTCGTCGCCCATGGGGGCGTCGGCCGTCACCCGGCACCCGAGCCTGTCGGTGTAGAAGGCCTTGGCCCGCTCCTGGTCGAACACG # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //