Array 1 2156-783 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG530855.1 Lactobacillus helveticus CIRM-BIA 951, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2155 28 100.0 33 ............................ TATTTAACTTCTCACCCGTTTTATTAGTAAGAT 2094 28 100.0 34 ............................ CTGTTACCAATATAGCATAATTTGTTTGATCTTG 2032 28 100.0 34 ............................ CATTTTGGAGCTTTTAACAACTCCTTTTCTTAGT 1970 28 100.0 33 ............................ TATTCACCAGTTCTTTTCTTATACAGTATTTCG 1909 28 100.0 33 ............................ CGATTGATGGGCTAATTGCAGATACAGATACTG 1848 28 100.0 33 ............................ TATTAGCATAGTCACTGGCTAGATTATCCACAG 1787 28 100.0 33 ............................ TAATTCAAAGATGAGCTGTGTTGCATGTCTACC 1726 28 100.0 33 ............................ TTTGTTTGTGTCCAGATCATCATATGGTTCCCA 1665 28 100.0 33 ............................ TAGAAGCAATGGAGGATTAAAAATGACGGAAAA 1604 28 100.0 33 ............................ CTGAGAAGTCGCCTTTGCCGGTTGCTTGTGATT 1543 28 100.0 33 ............................ TCTGAATTGAAGCACCGTACAAAGATGATTGCA 1482 28 100.0 33 ............................ CCACTTGCTCTTGATGCCTGACAGAGTTTCAAA 1421 28 100.0 33 ............................ TTATTGCCAGTTACAGCAACCTGTCTAATGATT 1360 28 100.0 33 ............................ CATGATGTATTGGGCAAACTTCTTTCTCTTTTT 1299 28 100.0 33 ............................ TTGCAGTAGCTTCAAATAAGCGTCTCTAGTTAG 1238 28 100.0 34 ............................ TAGTGCGCTCTTGACATTTGCCGCTCCAATAATG 1176 28 100.0 33 ............................ TTGAAAGCCACATAGCAATGCTGTTTCTTTTTG 1115 28 100.0 33 ............................ CAACTTTACAGCCCAAGTTATCCACAAGGCTAA 1054 28 100.0 33 ............................ TTTGCTGACTACAATCCAAGAATTATTGATGAG 993 28 100.0 33 ............................ TTGTTGGAATTACTGGAGCATTAATAGGCTTAA 932 28 100.0 33 ............................ TGAATACAATCGAATCGTAGGTGAAAATAATGC 871 28 100.0 33 ............................ TGGAGTTAATAGGAGATGCAGCGATGTCAGTAG 810 28 85.7 0 .......................TC.GA | ========== ====== ====== ====== ============================ ================================== ================== 23 28 99.4 33 GTTTTCTCCACGTAAGTGGAGGTGATCC # Left flank : GACGCAGCAGTAAATCATGAAAAATTGCCTGAAATTGAAGAAAACGATCAGTCAGTGTTAGGCATAGTTGTCTGCAGCAAAGGCTATCCAACGCATCCGGCTCCTAATGTGAAGATCGGCAAGTTGCCTGCAGGTACTAATACCTATATCGATTATGCCAACGTGAAAGGTAATTTGGATAATCTGATAGGTGATGGCGGCCGCCTGTTTATGGTGATTTCGGAAGCTGACAATTTGGTCCAGGCGCAAGATAATGTTTATTCTTATTTGAGTAAGCTTGATCTGCCAGATTGCTTCTACCGCCATGATATTGGTAATCGTGCTTTGAGAGATTAGATGTATGAAGAAAGTCCCGTTTGGGGCTTTTTTAGTTTGGTGAATATTTATGGGAGTGAAGAATAAGAAATACGCTGGTATAATTATTGTTGTATAAAATACAAACTGAATGAATTTCAGCTTTTTATTAATTAAAAATGGCTTAACGACGGGATTCTTTTAGT # Right flank : GGATCAGTCGTCTAACAGGGAAGACAGGCTTATTTGATATTAATAAGCAAGATATGGGTCCAATTCCCATCATCCTCAATATTTGAATAAAGTAAAAGCTCTTAGTTGTGAAAACTAATGGCTTTTTTGATGGATTAGTAATATTTTAGATCATCCTAAATTTTCTTTTATATAATAGGCTTGTATTGGGAGTAAAGGAGAAAATAACAATGTTATTGGCATTGGTTTGTTTAACATTTGCTGGTGTAAGTATTTCTACCGCTCAACCAGTTCAAGCCATAAGCAAGTATTCTGAAAAATGGCATACTATAAAAACTACTGAAAAAGTTTATGCCTACAAACCATATGTACCTCGTGGTGGTGCTATGTATCAAATGAAATTCATTCATAAAACACCGATCAAGAAAGGCACGTATCTAAGATTGATTCGTCTAAGTACTTCTTATCCATGGGAGATTATACGTGGCAAAAATCATTTGGCAATTTTAAGAAGAGATGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCTCCACGTAAGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //