Array 1 589257-590261 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JEMI01000035.1 Escherichia coli MP1 contig00043, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    589257	    29	 100.0	    32	.............................	ATTAACGGTCGCATCATCATATTGAAAAAATC	
    589318	    29	 100.0	    32	.............................	CGTTTATTGCGGCTATTGAAGAAGAGCAGGAA	
    589379	    29	 100.0	    32	.............................	GCTATCGGGTGTGGATACCGCTTTCGAGGCGT	
    589440	    29	 100.0	    32	.............................	CCGAAAATACACCTAAATCAGCAGTTATCGCT	
    589501	    29	 100.0	    32	.............................	GCGAAAGCCCAGCGGAGATTCATCACGTCCGC	
    589562	    29	 100.0	    32	.............................	CGCGGGATACGCCGGTTATATCACTGGTAGTG	
    589623	    29	 100.0	    32	.............................	TAGTTGTGCTGATTTTTGATGGATGGTTATAA	
    589684	    29	 100.0	    32	.............................	GAACTTGCTTACCTTTGCTGTGCTCGTCAGAA	
    589745	    29	 100.0	    32	.............................	GGCGTTGGTGGCTGGGGCCGCCCGGTTGTTGA	
    589806	    29	 100.0	    32	.............................	AAATGGCATTCGCTGTTGGAATTATGGGGTAT	
    589867	    29	 100.0	    32	.............................	AGCGATTTCAACGCGGCGACGGTGGACTTAAT	
    589928	    29	 100.0	    32	.............................	CCAGTAGGCGATTTGCGGGGCGTTCATGTTTT	
    589989	    29	 100.0	    32	.............................	AGTCAAAATTAGCAAAACTTGATTCAAATAAC	
    590050	    29	  96.6	    32	............G................	TCCGGCGAGCTGGTCACCTGGCTGAATAAATT	
    590111	    29	 100.0	    32	.............................	GAAACTGAAATCGCGGTTGATAACGCTGATAT	
    590172	    29	 100.0	    32	.............................	GGTAAAAACACGGTCTGAACCGACATTCATGT	
    590233	    29	  96.6	     0	............T................	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  99.6	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGCGGTCACCGGGGGCACGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTTGAAGTGCGTGCCGGTGTTTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGTGTTTTTACGCCACTGTTGAAATACAGCTTATCGCCAACA

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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