Array 1 661-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHGJ01000032.1 Acinetobacter baumannii strain MRSN22112 MRSN22112_contig00032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 660 30 93.3 30 ............................GT CAGTATTACTCCACACTTTTTATATTTCAC 600 30 100.0 30 .............................. TACCTCATCAATAAAAATAACTGATGTTTC 540 30 93.3 30 ............................AT AAAATCAACCCGTATTAATACCGAATGCAC 480 30 96.7 30 .............................A ATAAAGAGGTTTTTAACTGGTATGAATCGA 420 30 93.3 30 ............................CT CATGACGATGCTTTTCTAACAAAGTCATCC 360 30 100.0 30 .............................. AAAAACGTAACGCTGAATTGCAGGCTAAAA 300 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 240 30 93.3 30 ............................AA CTGAAGTGAAAATTGTTCATTAATGGTTAT 180 30 96.7 30 .............................C ATAGTTAATATAAATTTATTATGACAAAAA 120 30 96.7 30 .............................T AGCCGTTTGGACTTTACCAATCTATATTTA 60 30 96.7 0 ............................A. | ========== ====== ====== ====== ============================== ============================== ================== 11 30 95.8 30 GTTCATGGCGGCATACGCCATTTAGAAATG # Left flank : AACGTCAATTCAAACGTAAAAAGCTACTGAA # Right flank : GCAATATCAATTACAGGAATACCACCAGCAT # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8130-6655 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHGJ01000031.1 Acinetobacter baumannii strain MRSN22112 MRSN22112_contig00031, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 8129 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 8069 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 8009 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 7949 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 7889 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 7828 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 7767 30 93.3 31 ............................AG CGACTTTGAATTGATGCCATCTCCGCCTTTA 7706 30 96.7 30 .............................A TTCAGATTGGCTGCGGCCTCACCTGTAGCA 7646 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 7586 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 7526 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 7466 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 7406 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 7346 30 96.7 30 .............................C ACTTCTCTTAATTAGTGCTGAAGAATCAAA 7286 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 7225 30 96.7 30 ............................A. TGAATTAATACGGCTTACTGCAATTGGTTG 7165 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 7105 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 7044 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 6984 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 6924 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 6864 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 6804 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 6744 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 6684 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 25 30 94.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GAATTGCACTTGCTAAGCCAATAATGCCAAC # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1682-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHGJ01000033.1 Acinetobacter baumannii strain MRSN22112 MRSN22112_contig00033, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1681 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 1621 30 96.7 30 ............................A. CATCATTGCAGTCTTATAAGAGCCAGGCTG 1561 30 93.3 30 ............................AA ACTGCATAGATGACCATTAGAGACATCCCC 1501 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 1441 30 96.7 30 .............................C ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 1381 30 96.7 30 .............................A CTAACTGTAAAACAGAAGACTTGCCAACTT 1321 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 1261 30 93.3 30 ............................AA TGGCATTTGCTGCTGACGGGGATTTCGACT 1201 30 93.3 30 ............................AA ATCAAAATCGTGGCAGATAACAAAGCGATC 1141 30 96.7 31 .............................A ATCTCGGTATTTACGCCAAGGGCGCTATTCA 1080 30 96.7 30 ............................A. GATCTACCCTTTGAGCTAGATAAAACTTTT 1020 30 100.0 30 .............................. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 960 30 96.7 30 .............................G AGTATCGCAAATCAAACATTGCCAAGCTTT 900 30 100.0 30 .............................. AGATAAAGCAGGGGATAAAGGGACGTTAGC 840 30 96.7 30 .............................G TAATACTAGAATCTGTATATGCCAGCTCTT 780 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 720 30 96.7 30 ............................G. GTCGGGTAAAACAAGGGTAATGACTTGTGT 660 30 96.7 30 .............................C TACAAAGGCAATCTGGCTCTTCAATTCGTG 600 30 96.7 30 .............................G ATTGCGGACATTTAGTCTGCTGTATTTCTT 540 30 96.7 30 ............................A. CGTGATCAAACCACATGCCTTCATCTTCAT 480 30 93.3 30 ............................AC TTTAAGCGCAAACGAACAGCATCAAGATCA 420 30 96.7 30 .............................G TTTCATCTGTCTTGATAGCTTCCCCCATAA 360 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 300 30 100.0 30 .............................. GTGCGAGTGTCTACGAGCCAAGCCGAAATA 240 30 93.3 30 ............................AG TTGCTACTGAATTAGTTGTTATTGCTAAAA 180 30 100.0 30 .............................. AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 120 30 96.7 30 ............................A. TAATATAGCTTCTTCCAACTACAATATATT 60 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 28 30 96.1 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : TACACCAATCCCGCTTAGAACTTGTAAA # Right flank : ATTTGCTACGCCACCAGCCATACCTAGAAGC # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4084-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHGJ01000034.1 Acinetobacter baumannii strain MRSN22112 MRSN22112_contig00034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4083 30 96.7 30 .............................A GCAGACGGCCGACCTTATGCAGGTTGCTAC 4023 30 93.3 30 ............................TA TTCGAAAGTGTCGTTTTTCTCAATTCCCTT 3963 30 100.0 30 .............................. GCGTGGAAGTCAATCCATCATCCGACCAGC 3903 30 100.0 30 .............................. ATGGCCGTGAGATTGTAGATTGGATTGCAA 3843 30 93.3 30 ............................TG CACCTATTAATATTTTTTGAACTGCATTTT 3783 30 93.3 30 ............................CA AGAGAGCACCTGAATCATTCAACCAACTTA 3723 30 96.7 30 ............................G. TCAGGCTTTTGCTGCTTATAGTTATTATCC 3663 30 96.7 30 ............................T. TGTTTTCAAGCTTGGCATGAGATTTCGTAA 3603 30 93.3 30 ............................CC CAAGAAGTCAGCGATATAAGGGAAATTAAT 3543 30 96.7 30 .............................C CCATTGCGATATTCACTTCACGCGCTGAAA 3483 30 100.0 30 .............................. AAACGCGTGCTGATTGTACGGCGCGAGAAG 3423 30 93.3 30 ............................GA TTGGATGGTGTGGATATGTTCAAACGCAAG 3363 30 96.7 30 ............................C. TCCATTGATGAAGAAAGTGAATTTTTGACA 3303 30 93.3 30 ............................TC TGCAAATTACGAGCGAGCACACCGCATTGA 3243 30 96.7 30 .............................G ATGCATCAAGAACGAACTGTTGAAGATGTG 3183 30 100.0 30 .............................. TCACTAAAATATCTAACTCAGTTCTTAAAG 3123 30 96.7 30 .............................A TCGGTTAAAGATGCAAATGGTGAACAATCT 3063 30 93.3 30 ............................GC TTTGATCAGTAACTCAATGTATGAGTCATC 3003 30 100.0 30 .............................. ATCGAAAAATGGGAGTATAACCATGCATGA 2943 30 100.0 30 .............................. CGCAAAGATCATTAATCAAGGTCATGATGC 2883 30 96.7 30 .............................A AGAAATCAAAGACTTATCTGGTCAGGTTGA 2823 30 100.0 30 .............................. TGGTCAAAATCATTCACACAACCATTCACA 2763 30 96.7 30 .............................A TCGAAGAAAAGGACCGTCGGTTCTTAGTGC 2703 30 100.0 30 .............................. TGCGTTTTTGAAAGGTCGCCATTGTTTAAA 2643 30 93.3 30 ............................TC AAATGAACATTATTTGTGGTGAAAATGGGG 2583 30 96.7 30 ............................T. CTAAAAATTCAGGCTCATTACTAACGCCCT 2523 30 100.0 30 .............................. CTGCATTCTGAAGTGGAGTTTCTTCTAAAT 2463 30 96.7 30 ............................G. GAGTGTCGGTAGGAATTTCAATCCACCATC 2403 30 96.7 30 ............................T. GCCGCAATATCTCAGAAAAGCAAGATCAGT 2343 30 100.0 30 .............................. GATAGTATCTTGGGCGCAGGCAAAAGGAGC 2283 30 93.3 30 ............................GC CTTGTCGCTGCTCTTGCCGGATAATCGTTC 2223 30 96.7 30 ............................C. GCATGGATCTATTACGACATCTGTACAGTT 2163 30 93.3 30 ............................TC TTCCGTGTTAACAATTGCTTGAGCTATTGA 2103 30 93.3 30 ............................TA ATTGAAAATGCTCAATATGTAAAAGATTTT 2043 30 100.0 30 .............................. GGTGTAAACGACAATCTCTTAACCTTCCCC 1983 30 93.3 30 ............................TA AAGGTTCCTACTAACTACAATCCAGCAACA 1923 30 93.3 30 ............................TA ACGGTGCACGAACTGTTATTAGCGGCAAAA 1863 30 93.3 30 ............................TA CAGACCGAACACTTCTAAATAACTATGCCG 1803 30 96.7 30 ............................G. TACGTCTACGGTACGTGGTTAGCATGATTT 1743 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 1683 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 1623 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 1563 30 96.7 30 ............................T. GCTCTAAGCATTCCGAAGCAAGGAAATGTG 1503 30 100.0 31 .............................. CACATTTTGGGATGGCAATAGCATTATTTGT 1442 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 1382 30 96.7 31 .............................A TTTCATGCTTATGTGCTAAATTCATATTTCA 1321 30 96.7 30 ............................G. GTATTACCGTCATTTTTATGATGGTACATG 1261 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 1201 30 96.7 30 ............................G. GTTGTAATTTCGCTTGTATTGATCATTGCC 1141 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 1081 30 93.3 30 ............................TA TGATCTATACATTACAACAAGCAACACAAA 1021 30 93.3 30 ............................TC AATGTTATATCACATTAGATTAACAAAACA 961 30 93.3 30 A............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 901 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 841 30 96.7 30 ............................G. CGGTCGAATGTCTGGGACTTTTTTGTTATA 781 30 96.7 30 .............................A AGGCATACACCCAGTAGAAGATAAACAAAA 721 30 100.0 30 .............................. ATATGTGCGTAACCGAGCAAGCTTGTCACG 661 30 100.0 30 .............................. ACCGAAAGATGACAAAAAGCACCCTAAGGT 601 30 96.7 30 .............................A GTGAAAAAAGCTGACAGCAAAATAAACTCA 541 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 481 30 96.7 30 ............................G. CCAAGTCTTAAAGATGTTCAATGGGCAATG 421 30 96.7 30 .............................A TCGAATCAAAATATTAAAGAGTTACGTCAT 361 30 96.7 30 .............................A TTCGTGTTGACCAGGAATTAAAAGACACTT 301 30 96.7 30 ............................C. CAAAGTATTTAACACGGTTGTTAGCAGGAT 241 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 181 30 96.7 31 ............................T. GGTGTTGAACAATGCTTAAGTGAAATCACAA 120 30 93.3 30 ............................TA TATCAATCTTGTTAAGAGAAGCCGCATCAT 60 30 96.7 0 ............................G. | ========== ====== ====== ====== ============================== =============================== ================== 68 30 96.2 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TGATGTGTATGTTCTATTAGTGGTGTAAATC # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //