Array 1 178912-175831 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWGC01000005.1 Klebsiella pneumoniae strain VRCO0058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 178911 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 178850 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 178788 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 178727 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 178666 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 178605 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 178544 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 178483 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 178422 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 178361 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 178300 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 178239 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 178178 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 178117 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 178056 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 177995 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 177934 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 177873 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 177812 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 177751 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 177690 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 177629 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 177568 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 177507 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 177446 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 177385 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 177324 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 177263 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 177202 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 177141 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 177080 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 177019 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 176958 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 176897 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 176836 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 176775 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 176714 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 176652 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 176591 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 176530 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 176469 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 176408 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 176347 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 176286 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 176225 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 176164 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 176103 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 176042 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 175981 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 175920 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 175859 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //