Array 1 7515-7106 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECVZ010000027.1 Thermoactinomyces sp. CICC 10521 NODE_27_length_37692_cov_1.772005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 7514 37 100.0 38 ..................................... ATTTTTGGGGACGGGGAGGAAACCCCGGCCCAACGGGA 7439 37 100.0 37 ..................................... TACGAATCGATACAGATCCTCGTTATCCATATCATCC 7365 37 100.0 35 ..................................... TTTTCGTCTTCCGCTTTGGCTCAGGTGGCTTCGTC 7293 37 97.3 38 .......................A............. TATAAAACCTTGCACAAGATGCCAAAGCATGATCAATG 7218 37 89.2 39 .........A..........A..A.......A..... TCTCCAATATTAATGTCATTAGCTTGAACAAGTTGAGTA 7142 37 86.5 0 .T...............C.....AA......C..... | ========== ====== ====== ====== ===================================== ======================================= ================== 6 37 95.5 38 GAATCAATAGATACACCTCCGGTGGGAGGATTGAAAC # Left flank : TCAGCACGAAACCGACGATCAGCAGCACCAATATGTTAATTTTTGTCCGCAACGAAAATGGTTTAAGGGAGAAGTTCATCATGGACCTCGTTATAATTGGTTGGAATATTGTTAATAATATTTCAAATAATATTATCACAATCAAAAGAGATTAAAACATCGAAGGGGGGATTTTTACGGGATTCCTGCTTGCGCCCGGGCGAAATTGGAATGCAGATCAGCCCCGTCCTTTCAGTCAGGCTGGGTTGCGAATAACAAAATGGATAACTTATAATTGAAAATAAAATAAGAAAAATTCTCTCCCGGCATTTGCGAACACCGGAAGCTTCGAAAAAGACCCAAGGGTTGTTCGGAAACGCCAAAGTCCGCAAAAATAAAGGGCTCCCAGACTTTTTGGACGGAGGTTATCCAGTCAAAAAAGCCTGAAACCTGGGCAAATCGGGGAGATGTTCGGAAAACCACGAATAAGCCCAATAAAATTAAGGAGTACAGTGAACGCC # Right flank : GTTCCAGGGAGTGAGTCAGTTGTCCTGCCGTCAAAGGTTCTTTTGAGGGTGGGCCTTATCTGTTTTTATAAGACATGTTTGAAACACAGACTGATGAACATTTAAGAAACCGAGGAAGAATTGCAACAAGAACGGGAAGAAATCGAGAAGGGATAAAAAAAGAAGCAAACAAGCTTATCGATGGCGGAACAAATCCAAGAGGAGGAAGAAGATGAATGAAGCCCCGAGTCTACTTCTGCCGGGTTTGTGGAGAAAGCTTTGATTACCCGGATATCGTTTGCGCCAAGCATCAACTGGAACGGGAGCGGATTCACAAAGAATGGAGGGAAGACCCGGGGTATCAAAAGATTCAGGAAGAGGCACGAAAACGAATTGAAAAATATTTTCCGAAGAAATAAAAAATCACCCGCTTCAAGGAGACTCAACAATAATAGGGATCCTGGCCAAGATCACACTTAACTGTTCCCAAGTTACCAGTGGTCGCATCAAATCCCTCCTTT # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:0, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCAATAGATACACCTCCGGTGGGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 2428-2592 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECVZ010000054.1 Thermoactinomyces sp. CICC 10521 NODE_54_length_6534_cov_0.987102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2428 30 100.0 36 .............................. TAAACTCCAACTTGAAGGTAATCATCAACAGCAAGA 2494 30 100.0 38 .............................. GGATGGAGCCGATCTCATGAAATCCCTTTTCCGTGTAT 2562 30 80.0 0 ...................CC.GG...T.T | A [2579] ========== ====== ====== ====== ============================== ====================================== ================== 3 30 93.3 37 GTTTAGTTGTATCCATATTGGAATTGAAAC # Left flank : CCGTGGCTACATTGATGACCTCAAGAAGACCGAGAACAATCCGACATCGAATATGGGGATTTAGGGTCACTTCATGATCCGATTTGATCACCAGTTGTGTACCATCCCATCCGGAGACCAATCAAAATCATAAACGCTCCGATATGGGATGTTCTTCACATGATCGATCACATTATGAATCATATGAAATATGATTTGATCGATGATATCAAGGATGAAAGTTAAATCTCTGATTTTCTTTGTCTCGTCTGTGTTGCTACCATTTCTGACAAATCCAAAGTGACTCGCATTTTCAAACCTTCCATCATGATTGGTACGGCTGTCCTGCCAAAATCAAGCGACAGGTTTTAATAGAGAAGTGATTGGGGAACATCAATAAAAATCCGAGCACATCCAAGAGTCTGTGAACCTCCCGGGGATTTTGCAGGATTGGAGGTTTACAGACTGATTTTGTTTTTTATAAACTGAAAATAATTGATATTATCGATATTCACACACGG # Right flank : TGTGGTGATTTAGTGCGGAGAAAAACGATTGAGCGAGTTTTTGCCGATATGAAAGAGATGCATGGAATGCGTTGGACGACGCTTCGTAGGAAGCGTCGTATTCAGATGTACAGTCTGACTCCTACCAGTAATATACAATGGTAGGAGTCATCAGCTCCTAACAATATTTATTCTGCTCGGCAAACAATTTTCCAAGCTCTCTTAATAACGCTGGTGAATCGAGTCGTCCCATATGAACTTCGATAAACACCAGTTTATTTGCTTTTTCAGCTTTAGAGAGCACTTCTTCCAGTTCTTCTTCAGTTTTAATTTGAAAGCTGATGCTGTTCCCATTTAGATCCAGCACATCCGGTATGCGTCTATAATTCCACCTGTTTATATCGTTATACCTCTGCTCGGCACCATGAATCATTCGTTCAACGGTGTAACCGTCATTATTGATCAAGAAAATAATCGGTTTCAGGTCATGAAGAAGGATCGTAGACAATTCTTGAGCAGTA # Questionable array : NO Score: 5.02 # Score Detail : 1:0, 2:0, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGTTGTATCCATATTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //