Array 1 91344-91624 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS264586.1 Schaalia odontolytica ATCC 17982 Scfld021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =============================== ================== 91344 32 68.8 31 C...T.GG.......G.C..T.A.T......C TCGGATCGAAGTAGTACCAAGCTCCGTCCAG 91407 32 71.9 31 CT.............G.C..TG.....A.CC. CGGGGTGCAGGTAGTACCAGGAGGACCCCCG 91470 32 71.9 31 .T.............GAC..T...A...GA.T CGGTGCTCAGGTAGTACCAGGAGGAGCCCTG 91533 32 100.0 29 ................................ GGGCCATGTAGTACCAAGAGGACCCATCC 91594 31 71.9 0 .T.-.C...A..A....C..T......A...C | ========== ====== ====== ====== ================================ =============================== ================== 5 32 76.9 31 TCGCAGCCAGCCGGTCGTCAACGCGCCGCTGG # Left flank : GGTAGGAGAAGGCCTCGCGTTGCGATCGCAGCCATTCATGTCAAACATATCGCTTTTTAGGGTTTTCGGATACCCCTACGACCCATTTTCTCAACATATGTCAGCCGATTCACCCGTATCTGCGCAAGTAGTAGCATACTTAGCCCTTTCACGAAGGCCTGGCATCACCTAGCTGATTCACCTCCTTCTCATCGAGGTTTTCTAGGGTTTTGTTGCATCTTTCCACTCAATCTGTCAAGAAGACCGATAATCTATATTGATCGCATCTGACAACGACCCTAACCGCCCGTTACGCAGGCGATTTACTTCATGATCGACCGAATGGTCGAACAAGATGTGCACGGCGCACCCTGGGTTGACCCGCCATGCCGACAAATGACGAATGGGTGGTGAGACAAGCACACGCCCCCGGATGATCTCCGGGGGCGTGTGGGAAGCCTGGTAACAGGTCAGTTCATCAGCTGTCCTGAGTCAGCAAAGCGATAGGAACGCCAGCCGAT # Right flank : CCGGGTGTCAGGTAGTACCAGGTCAGCCCATCGAGGATCCATCCCGTCACCATCTGTCCGGTCGTCGGGTTCAGGTAGTACCAGGAAGAGCCATCCTTCACCCAGCCACTCGCCTGAGCACCAGACGGATTGTGGAAGTACCACGCGCCATCCTCACTCGCCCAGCCAGTACGCATGTAGCCATCCGCACCGAAGCGGTAGATCGAGTTACCGATCTGCACCGTCCGGCCAGCCGGATAGGTGCCATCCGCATAGCGGTACCACCAGCCGACAGAGTCGCTCACCCACTGGCCGTCCTGCGGGGCAGGAGCCGGAGTCGGCTCGGGAGCGGGCGTCGGGTCCGGAGACGGAGCAGGCGTCGGCTCAGGTGCAGGCGTCGGCTCAGGCGCCGGTGTCGGGTCCGGGGTACCCGGCAGCTTGATCATGAGGGTGCTCGTCAGGTACGAGGCGTCGCGCACCTGCACACGCAGGCTCACGTCCGCGGCGGAAGGGGTCCACGG # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:3, 3:0, 4:-0.15, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCAGCCAGCCGGTCGTCAACGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 545840-538364 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS264586.1 Schaalia odontolytica ATCC 17982 Scfld021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 545839 29 100.0 32 ............................. GCGGCTGCCGCCCTGGACCGAAGCCTCAACGG 545778 29 100.0 32 ............................. ATCTGCGCGGCAGCCTCGGACGCGCCCCTGGT 545717 29 100.0 32 ............................. TTCTGGTGCCATGAGAATGTTCCTTTCGTGAT 545656 29 100.0 32 ............................. ATTGGTTCGGTCCATCGCCGCAAACGGCCCCG 545595 29 96.6 32 ............................C TGCCTTAGGGCGCATGTTCTACCAGCTCGCAG 545534 29 96.6 32 ............................C CAGTGGAGGCGCTGGTTTGCGGTGAGCCATAC 545473 29 100.0 32 ............................. AGCACCAGGAGAACGCGCCCCAGGCCACCCGC 545412 29 100.0 32 ............................. GCGCAGTGCCCGGCTCGGCTGACGCCGACGCC 545351 29 96.6 32 ............................T GAACACCTGCAGGCGTTGCGGCGACGAACTGC 545290 29 100.0 32 ............................. CCGTCGCCGCAACCGACGCAACGTTCGGACCA 545229 29 100.0 32 ............................. TCGTAGATGTAGGGGATGATGCTAGATGTCAT 545168 29 96.6 32 ............................T GCCCTGGGAGGACAACTGACATGACATACTTC 545107 29 96.6 32 ............................C CTCAACAAGCGCGGCTCCTTCTGGGTCGTCGA 545046 29 96.6 32 ............................C CACCAAGGAGGACCGATGACGCGCGAATATCT 544985 29 100.0 32 ............................. GCCACCAAGGCCGGCCTGTGGGGACAGCGCGG 544924 29 96.6 32 ............................A ATGAGAGGAAGGCCTGGAGGACAGGCGGCGCA 544863 29 100.0 32 ............................. CCGTCTCCATGGCCGCCGACCTGGAACAGTCC 544802 29 96.6 32 ............................C AAGCTGAAGCAGCTACCCGGCTGGTTTGGCCC 544741 29 100.0 32 ............................. GACCAAGAACTGATGAGCACCAAGACCGCCGC 544680 29 100.0 32 ............................. TTCCCTAATAACCAGCACCCAAAACGGGTGTA 544619 29 100.0 33 ............................. TGCGCCGGGCCGGTGCAGTCATTGCTGCACGCG 544557 29 100.0 32 ............................. CGAAGCTCGACGCGCTCGCGGAAGTGGTCGAA 544496 29 100.0 32 ............................. TAGCGGCGGCGGTAGCCGGTGATCGTGCGCCC 544435 29 96.6 32 ............................C CGCCGCGCGGTGAAGAAGCTGCGCGCCCGCTG 544374 29 100.0 32 ............................. GTCACGCCCTTGTTGCCGTTCGTGTTGTAGCA 544313 29 100.0 32 ............................. GCCTGGAGTGGGACGGCGTGAGCCGAATCGAA 544252 29 100.0 32 ............................. GACAGGCGACCGTCCCTCGATGCCCGCACCTG 544191 29 100.0 32 ............................. GTTCCCTCCTCATCGAGGCCATGCAGACGGCC 544130 29 96.6 32 ............................C GGGGTGTCCTCGGGGGACACCGCGAAAAGCTC 544069 29 96.6 32 ............................T TGGTCATACGCGGGTCGCCTCGCCTTTCCACT 544008 29 100.0 32 ............................. GCCGCGCGTCTTGCGAGGCGTGGTGTTGTCGG 543947 29 100.0 32 ............................. TTCCAGGACGACCTGAACCAGCTCCGCGAGGC 543886 29 100.0 31 ............................. CGCAGCCTGGAGCTACTGAACCGTCTTCTCC 543826 29 96.6 32 ............................T GGTGATGAGGACGCTCAGCTCGCCCTCCTCGA 543765 29 100.0 32 ............................. GACAGACGACCGTCCCGAGATGCGCGCACCTG 543704 29 93.1 32 ..........................GG. AGGTCAGACTTGCCCACCAGCTTCTCCAGCTG 543643 29 96.6 32 ............................C ATGCTGAGTGCCCGCCCGTATGCCGGGTCGCT 543582 29 96.6 32 ............................C CGTCTTCTCCGAAACGCCTGGGAGCTGTACAA 543521 29 96.6 32 ............................C GAGGACCTGCGTCCGGCACCCCTTGTTCATGC 543460 29 100.0 32 ............................. CCGTTGAGGAGCGATTCACGGTCGGAGATGTC 543399 29 96.6 32 ............................T ACACGCCCGACGGGACGAGGCAGTGGGCTTCG 543338 29 96.6 32 ............................C CCTTGATTCCAGCGGTAGAAGCGTCCAGCGAG 543277 29 96.6 32 ............................C GACCAGGTCAGCGGGAGAGGCTGCGGATCGCT 543216 29 96.6 32 ............................C TTCTCCCAGCCCTCCGAGACCGTGACCTGCTC 543155 29 100.0 32 ............................. GCCGCGTCGCGCTCGCGTGTCGCGTGCTGGTA 543094 29 100.0 32 ............................. ACGACCTCATCTGAGGACCAGCGGAACCCCGC 543033 29 100.0 32 ............................. CAGAAGCCCTTCTATATAGCTCATAGGATGGG 542972 29 96.6 32 ............................C ACGCGGTTCTGCTCGGCCTCGCTCATACGGTC 542911 29 96.6 32 ............................C CCCAGTATGGGCCGGGCCGTGCAAGGTCCAGA 542850 29 96.6 32 ............................C AGGAGGCCCGCGCCCTGGCCGTCGCCACCCGT 542789 29 100.0 32 ............................. CGCAGGCCTAGCCCGTACATGGCAGCGACGAA 542728 29 100.0 32 ............................. CCAGCGGGAGAGTTCGCCGGGCATCCTGGTCG 542667 29 96.6 32 ............................C AGTCCACCGGCGCTATCGAGGCTGTCTTCAAG 542606 29 100.0 32 ............................. GGCCAGGCAGGGCACCCGCGCACACCTCAGCA 542545 29 96.6 32 ............................C CTTACTACGACTACCCGTGGGACTGCGTGCTC 542484 29 96.6 32 ............................C GGGGGCCTGGAGATCGACGGCATTCCGGGTCC 542423 29 96.6 32 ............................C GAGGCCCGGAGGACTCGCCCCAGTGAGTCCCG 542362 29 100.0 32 ............................. GCATGTGGGTGGTGTAGTAAATTGCGACGCTG 542301 29 96.6 32 ............................T CTCCCCGACAAATGACGGTGAAGTTCGACTAC 542240 29 96.6 32 ............................C TGTTGCAGAAGTGCGCAAGTACACCGACCTTA 542179 29 96.6 32 ............................T GGCATCTCCGCCGTGGTCAGGGTGTGGGTCTC 542118 29 96.6 32 ............................T TCGCTAGGCTCGCCGTTTGGTCCCTTCGCGGA 542057 29 96.6 33 ............................C GCGGCGGCTCGCGCGCACTCCTCCTACATCCCC 541995 29 96.6 32 ............................C GGCGTGTCCCTGATTGACTGGGCGGGCGCCCT 541934 29 96.6 33 ............................C TCCGTGACCAGGGTTCGGCGTCCGTTGATCGTC 541872 29 96.6 32 ............................C TGCGCGCTGGATTCCCGTGATGTCCGTGTAGC 541811 29 96.6 32 ............................A GACAGCGGGATGGTGAGGAGGGCGGTCAGTCC 541750 29 100.0 32 ............................. GCGGCGCACCCCGGCGCGTCCACCATGAGGGG 541689 29 96.6 33 ............................A GATCCTCAACCTCACGCGCGACCTATCCGTCTA 541627 29 100.0 32 ............................. TGGCGGGACAGGGGGTTAGCGTCTGTGATGAT 541566 29 96.6 32 ............................C CACGATCTCGATCGACACAACCCTCGCCGGAG 541505 29 100.0 32 ............................. CCACGATTGGGATCGACGCCGTCACGAGCGCC 541444 29 96.6 32 ............................T GCGTATTCGGCCATGTCCTAGACCTCGAGGGA 541383 29 100.0 32 ............................. CGCGCGCCACAAAGTAACCCACCCCGGCGCCG 541322 29 96.6 32 ............................T CGCATCTGGAATTGCCCTCGAATAGGGGGCTA 541261 29 96.6 32 ............................C CCTAGGCGCAACCATTCAGGCAGTCAGTCAAA 541200 29 96.6 32 ............................C ACGCCGGCCTGTGCGATGAGCAGCCGCCAGGT 541139 29 100.0 32 ............................. CCGGGCTTTATGGTCGGGGGCGGGCTGCGCGT 541078 29 96.6 32 ............................C TCGGTCGCGTCCCCGAGGGACTTCGTGAGCGG 541017 29 96.6 32 ............................T TGGACACAGCAGCAGAAGTCACTATGGCTGTG 540956 29 100.0 32 ............................. GCCGTGGTCCGCACTGGTTTCGAGTCAAAGCG 540895 29 100.0 32 ............................. GTCCGCCGATGGGTCGCCAAACCGTCATCGTG 540834 29 96.6 32 ............................C GCCGCGCACCACGCGCAAGCAGCCGCGATCGA 540773 29 96.6 32 ............................C CGGGTATCGGCACGTCATGAAGCTGTGCGGGA 540712 29 100.0 32 ............................. CAGCCAGAGCAACGATCGCGGCCGCGAACTGA 540651 29 96.6 32 ............................T CGGGCTGGGCGGAATCGTCTGTGGCAACCTCA 540590 29 100.0 32 ............................. GGGGTGGGGATGGATCACAGACCCCTACGACC 540529 29 100.0 32 ............................. GGGGTGGGGATGGATCACAGACCCCTACGACC 540468 29 96.6 32 ............................C CCGGCGTCTCCGCCCCCGTCTGCCTCGCAAAT 540407 29 96.6 32 ............................T CTACCGAATTGGAAGGAACCATGACCGCAAAG 540346 29 100.0 32 ............................. CCTAAAGCGCCCAAACATGTGCGGCGGGGACA 540285 29 100.0 32 ............................. GGTACGACGCTGCTGCAGCGCACGGCGGACTT 540224 29 96.6 32 ............................C GGCTGCCCCAGCTTCGAACGCGCCGCCGACGT 540163 29 96.6 32 ............................T AGCCCAGATGTTGCGACCTAGCAAGGTGTTGC 540102 29 100.0 32 ............................. AGCACGCAAGGTACTCAGGTGCGCCGCTGCGA 540041 29 96.6 32 ............................C CAGTTGGCCGACGCGATTCCCGGCGCGTCTGG 539980 29 100.0 32 ............................. TGGATGCAGGCCATGGACCGCTCCGGTACCCG 539919 29 96.6 32 ............................T GGGTGTGGGGCGATATTGTGGGCGGGCCACCC 539858 29 100.0 33 ............................. TTTCCCCTCCCACCTGGTAGGCGGTGGGCACGC 539796 29 100.0 32 ............................. CCCATCACGTAGGAACGGCGGAAACGGTGGCG 539735 29 89.7 32 T...............T...........C TCCTGCCGATCGGTCAAACATCGCGGACAGAT 539674 29 96.6 32 ..............G.............. GCGATTGAGACTGTCTGGGTCGTGTCGGACCA 539613 29 100.0 32 ............................. GCGCGCTGAACATCAAACGCGCCATGCAGCAA 539552 29 96.6 32 ............................C TATCAGACTGTGCTGCTCGCAAGGAGGGTTGC 539491 29 100.0 32 ............................. TGGCCTACACCGCGTGCCTGATGATCACCGAG 539430 29 96.6 32 ............................T TGTGCGCCCACGCGGCATGGGCGGGGCCAACA 539369 29 96.6 32 ............................C CGCTGGTTCGTCGGCACCACCGGCGAAACCCC 539308 29 100.0 32 ............................. CCGTGGGCAATGGTGTGGGACTCGACCCCATG 539247 29 100.0 32 ............................. TATTTTCTGGACCTCGGGTTGACATCGAATCG 539186 29 96.6 32 ....................C........ GTCGGGATTTGGAGCCAGCCAGACGGCCCCGC 539125 29 100.0 32 ............................. TCCCACTCGACGACGCGGGCCTAGCCCAGGAG 539064 29 96.6 32 ..........................T.. GCAACGCGGGGGAGGTGGATGTGGTCGTCGTC 539003 29 96.6 32 ............................C ATGCGCGACGCCGCCGCCTGGTGGCTTGGATG 538942 29 96.6 32 ............................C GTGTGCGCGGCTGTTTGCGCCTGCCCGAGCAC 538881 29 100.0 32 ............................. CCGTGGGCAATGGTGTGGGACTCGACCCCATG 538820 29 96.6 31 ............................C CCATGGTCTCCGTCTTGCCCTTCAACCAGTG G [538794] 538759 29 93.1 32 .................T..........C TACCGCGAACCCGCCGAAAAGGGAGCCTGAAA 538698 29 100.0 32 ............................. GCCAGGCTCGAAATCGCCGTCCGCATGGGGCT 538637 29 100.0 32 ............................. CACTTGCGCGGTTCGCGCGCGCACGCTGGGCA 538576 29 89.7 32 ..........................GTC TTGCCACGCCGCCCCTGCAGTGGTGCCCACAC 538515 29 93.1 32 ..........T.................C GTGAGCATTGCGCTGGTCACTCTGTGGATCTA 538454 29 93.1 32 ................T...........T GCGAAACTGTACACGGGCGGTGTGAACATCCC 538393 29 89.7 0 ..........T.....T...........C | G [538367] ========== ====== ====== ====== ============================= ================================= ================== 123 29 97.8 32 GTTTTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : GTCGCTGATCTGCGGTTGTGGGATGACCGCGAGGGCGCGGTCGCTGCTGGCGTGTCGTATGAGGAGAGTGGATCCTGGTGATCGTCCTTGTGCTGTCCGCAGTGCCTGAAGGTTTGCGAGGGCACGTGACTCGGTGGTTGATGGAAATCTCCCCGGGGGTATTCGTGGGGACGCTGTCCGCACGGGTTCGTGAACGCTTGTGGGTTATTGTCACTGAGAACATGAAGACTGGGCGTGCCGTCATGGTCTATCGGGCGCGCAACGAACAGGGCCTGGAGTTCTTGACGTGGGGAGACCCCTGGAAGCCCGTCGACTTCGATGGGCTGACGCTCATGATGCGTCCCTACTACTCCGAGGGACGAGGCCAATACTCCGAACCTGATCCTGCGGCGCGCCAGTTGCGTAAGCGTCCTGCGATGAGTAACTTTCAGAAGAGGCGCAAAGCTCAAGGCTTTCCAAGATCTGACCGATCTGCGCGATAAAAACGCAGGTCAGAAAGT # Right flank : TACAGGAAGCCGCATAACGGCTACCATTTATAGCGTCCAAGTTTCGGAGCGCAGTTCAATACGAGGCCGGGGCTCAGTGCGTCCGATGCGTATCCTCACGCGGAGGCCGGGACGGCCAGGCTCCGCGTCTGCGAGTCGCCACCGCCAGTGCACCCAGCAGGCTCAGCATGCCGACGTCAGCGAGGATGCCAGCCATGTCTGCATCGGTGCGAGCCAGTTGCTTCGGCTTGGGAGTTGGAGGCGCGGGAGTCGAAGGCATTGCTGTGGCCGGGGGAGTGGCCGAGCTCGGTGTCGAAGGAGTCGGCGTGACTGGCGGGGTAGCCGTCGGGGATATCACTACATGAAGCCTTCTGGCGGCGTGTCATCGGCGTGTCGGATCCCCGTGTCGTGCAATTCCCCCGATTGGTAGTGGTGAGGTCGCGCCATAGGGCTACGGGGTCTCGGGTCTCCAGAAGTTTCGCACGTAATTCCATCGAGGGTATTCCAAGCTTTGAAGGAAG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1630235-1630441 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS264586.1 Schaalia odontolytica ATCC 17982 Scfld021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================= ================== 1630235 27 100.0 33 ........................... AACCCTCAACCTCGACCCAGCCGATGAGCATAA 1630295 27 100.0 31 ........................... TGCCGCCGACCAGGGTCCAGCCGGTGGCCAT 1630353 27 85.2 33 ........C..G.............CT CGTTGTTGTAGTGGACCCAACCCATGGCCATGT A,G [1630356,1630359] 1630415 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ================================= ================== 4 27 96.3 33 CGCCCGAGGCGTTCAGGTAGTACCAGG # Left flank : GCATCTGGGAGACCTTCACCTTCCACACCGCCGAGGACCTCACGACGCTGCTCTTCCCGAACGCGCTGGCGGGCTACGCCCCCGAGGTCGACGTGGTTGCCTCCGGCAAGGCCTGGATCGAGGCTCACGCGGACGCATCCGCCGGCACGATCCGCATCATCCGTGAGCTCATCGACGTGTGTGAACGTCAGATCGCCAACCAGGCGGTGGACGCCGCGGGCTGATCAGCCTCACAACGACGCCAGGGGGCGTGGCCACGTGGCCACGCCCCCTTCGTCTGACGTCCCAACTCCCTCAGGGAACACTAGCGTCGCATAAGCAACCCCGGCCTCGTTACCGTGAATGGACGAGGCCGGGGCATTGCGTGCATGATTGCGTCCGAGTGAGCGTCGCTCACTCACAGCTCATGCGCGCCGATCACTTCCAAGCGCCCCACCAGGTGCCGTTGTGGAAGAACCAGTGACGCTCGCCGTCGATCCACTGCGTACCGGTGACCATCG # Right flank : GAGTCGTCAACATTGATCCAGCCGGTCTGCATGAAGCCAGTCTCGGGATCCAGGAAGTACCAGGAGCCGTCGATAACGTTCCAACCGAAGGCCTGGGCACCTGAGGAAGCAAAGTACTCCCACTCGCCCTCCTGGTTGTGCCAGCCGGTGATCATGTAGCCGTTCTCATCAAAGCGGTAGACGACGTCATCAATCTCGATGAGTTCGTTCTTGGCGTAGGTTCCATCTCCGAGGTCGAACCACCAGCCTTTACCGTCCTGCTTCCAGGAGGCAGCACCATCGTCGGCGGCCGCGCCGTCGTCAGCGGGCTGCTCCTCGGTGGCACCGTCGGTGGCGGGCTGCTCCTCGGCGGCGACCTCGGTGGGAGCGCCGGGATCGGTCAGCTCGGCCGCGTTGGCGGGAACGACAGTTCCGGCGAGAACGGCAGCGCTCACGGCGGCGATCATAAGAGTGCGAACATTAATGGGGCGCATGGGCTTTCCTTTCGTGAGGCGCACATC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCCCGAGGCGTTCAGGTAGTACCAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //