Array 1 45221-44195 **** Predicted by CRISPRDetect 2.4 *** >NZ_FEVC01000005.1 Neisseria meningitidis strain 2842STDY5881241, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45220 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 45154 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 45088 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 45022 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 44956 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 44890 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 44824 36 100.0 30 .................................... CTTTCACTTCAGTAATGGCTTCGGCATATA 44758 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTTCTATACA 44692 36 100.0 30 .................................... GTGGGAGTTCGTCTATGAATTCGATGGCGT 44626 36 100.0 30 .................................... TTTGCTGCCCGACAATGCGCGTCCGCAGAT 44560 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 44494 36 100.0 30 .................................... TTCCAAAGTTTTAATTTATATTATTTTAGT 44428 36 97.2 30 ............................A....... CAGAAGATGATAACTGTGCTGGGGGTGCGT 44362 36 100.0 30 .................................... ACGCAATAACGGCGAGTTTACGCATCAATG 44296 36 100.0 30 .................................... TAACGATTGAAAGTGAGTATGTATTAAGTA 44230 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.3 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTGTCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //