Array 1 4213773-4212964 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056117.1 Enterobacter cloacae strain DSM 26481 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4213772 28 100.0 32 ............................ GTAAAATTATGGATGTGCCGTTCTACAAGGAC 4213712 28 100.0 32 ............................ ACCCTCACATTGCCAGCCTGTCGCTGGCTTTT 4213652 28 100.0 32 ............................ ATCAGAAGGCGTGGCTGCTTTGGAACTACAGC 4213592 28 100.0 32 ............................ TTCACTGTCTGCCCCAGGGCGTCCGTAATGGT 4213532 28 100.0 32 ............................ TTTATCGTTCCGTTGACGTGCAATAGGTTGGC 4213472 28 100.0 32 ............................ GTTAAAACGGACGTTCAAAACGTCCGTAAACG 4213412 28 100.0 32 ............................ CCGCCAACGGACGGGTTTTAGACCGGAGTTTT 4213352 28 100.0 32 ............................ ACGCAGCCGATATCTAAACAGCCCAGGTCAGA 4213292 28 100.0 32 ............................ TCAAACCGGGCAAGGGCGGGAAAGGTATACCG 4213232 28 100.0 32 ............................ GTCACGCATGCGCTGGTCTGGTTTCGCTCAGG 4213172 28 100.0 32 ............................ ATCAGGATGACCACCAGCCTTTTCACGCCATC 4213112 28 100.0 32 ............................ GCCACCGTGAACGCGACGATATCGACTACCCG 4213052 28 96.4 32 ......................A..... GAACTGGACAGCACCCTGCGCATCCCGTCAAT 4212992 28 96.4 0 ..............T............. | C [4212967] ========== ====== ====== ====== ============================ ================================ ================== 14 28 99.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAAACGGGCCACGCGTTCGCTCTCATCTGGCGTCAGCGTCCGTCCCGCGCTTTTGCGTCGGGCAACGTTACGCTCATTAATCCCTGTAACGCGCAAAATATCTGCTTTCGACATGGCCGTCCACTCATGGATATTTTCGAGGACGCTGACGGGTAAACCCTGGTTAAGATATTGAATCAGCCGCATACCTCTGTTTGCAGGTAAACCAGCATAGCGCCACAGCGTGTTATCAGCAGGTTTTTGCGCGGGGACCCATGTTCTCATAGTACCTCCTTAGTAATGTCATTTGTCATGGGTAAGTATAGTCATTTGTCAGGTGTGATGGAATGGCTGTTTTTTATGCCGGGTAGTTTATGAGAAAAGGGCGTTTGACCCTAATTTTTAACTTATTTTAATTCATTGATTTTAAATGAGTATTTTACTGGCTGAAAAAGAGGGGCAGAGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATCAAGGTGTAGAGATATTATTTCA # Right flank : ATAGAAAATAAGGCCTTTACACCTCTTACTCTCTGCACTGTCGAACAGACAGCACCTTAGCTGAAACGAAACTCAAACAGTTGCTCAAATAATCGACTGCGCTAACAAAAAAATAAGGCCGGGATATTCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCAGCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 4224511-4223583 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056117.1 Enterobacter cloacae strain DSM 26481 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4224510 28 100.0 32 ............................ GCTGAACCCATCTCTTGCAGCACGAGAAGCAT 4224450 28 100.0 32 ............................ AAGCGCCAACCGGGGCGACATACTTTGCATAC 4224390 28 100.0 32 ............................ GCGGGCGATGAGGTACTCGCTGATTTCCGTGT 4224330 28 100.0 32 ............................ ATGCGCCCTCCGTGCCGCTAGACGCAGCCATT 4224270 28 100.0 32 ............................ TGACCTGATCGCCACCATCGCATGCAGCAGTT 4224210 28 100.0 32 ............................ TTACGTTTCAGTTCTTCCAGGATGGCGCGCAT 4224150 28 100.0 32 ............................ ATGCGGAAATTTTTACAGGAATTAAGGGAGGC 4224090 28 100.0 32 ............................ AGTGAACCAATTCATGCAAGCCGGTGGCGTAA 4224030 28 100.0 32 ............................ TTATCCTGCCGCATCCGGTGACGTTTACGATT 4223970 28 100.0 32 ............................ TTTTGGCCCTTCAAACTTCAGCTCACCCGCGT 4223910 28 100.0 32 ............................ GCTTACTGGCTGCATATATCCGAACTTATGAA 4223850 28 96.4 32 ..............T............. CACAGCGTCCCACTGCCACAGCGATAACCTTT 4223790 28 100.0 32 ............................ TAATCAACCAGCACCAAACAGGTGCGAACATG 4223730 28 100.0 32 ............................ AGCCGCGCGGCCAGCACGCGATAACCCACTGA 4223670 28 100.0 32 ............................ ACAATCTGACCTCCTCATCTTGTCACAGCTGC 4223610 28 78.6 0 ...........C...A.....AC.A.C. | ========== ====== ====== ====== ============================ ================================ ================== 16 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCTCCCACAAACGCAGCCCGTTTGCCGTTGCCTCGGGGCTTATCTGGAAGAAGTTAAAACCGGCCTTGCAGAATCAATGCGTGATTTTCAGGTGGTTGAATTTGAGGACGACGCGGAGCAACCGCGACAAAAAGAGTGGCTGCTGGAGGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCATTTGACGGGGTTGCTCCATGACATTACGCATTCAATGGCGGCAGATGTCTTTGCACCTCAACCTTCAGAAAAGATAATGCACATTATTTCCTGAGTGCGATCTGAGGCATCGGGGAAGCTCCTCTGACGCCAATGGTTTAACCCTTTTTTTGATGTAAACGTAAATCATTGATTTATAAGGTGTGGATTTACGTTTCAGAAAAAAGGGTTTTATGCGCAAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCTTTCA # Right flank : AATCCCCTTACAAATATTCATTCTATTTATTTAAACATTAAATACCATCACACTTACACCCTCTATTTTTCAGATTAAATAAAAAATATATTCACTCGCAAATTATATCTCTACTTATATATTATTCGTAAAAATAACATCTCAAAGAGAAAGAGTGTTTTTCGCTTAATAATCACTGCAATTACTGTTCATTTGATACCCATCACATTTGTTTTCATCTTATTTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTGAAAACCATTCTCCATTCAAAACGCGCCAACATCTATTACCTGGAGAAATGTCGTATTCAGGTCAATGGTGGGCGCGTTGAATATGTCACTCAGGAAGGCAAAGAATCGTTTTACTGGAATATTCCCATCGCCAATACCACGGCAGTGATGCTGGGTATGGGAACATCCGTTACGCAAATGGCAATGCGCGAGTTC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //