Array 1 10636-14567 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGFBB010000010.1 Lactobacillus delbrueckii subsp. bulgaricus strain HUL 15 HUL_15_contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 10636 28 100.0 33 ............................ CCACGCTTGAGAACTCAATGGTTACTGAGTTTT 10697 28 100.0 33 ............................ CTATGGCCTTGATGAAAAAGAAGCCGATGAATG 10758 28 100.0 33 ............................ TGATGGAACAAGATATCTGTTTGCGTCACGACG 10819 28 100.0 33 ............................ TAAGCCAGCGCGTGGTGGGCTTCATCGATCAAA 10880 28 100.0 33 ............................ TTCCTCTGCGCTCCCCGGTTGGGTTTTAAAGCT 10941 28 100.0 33 ............................ CATATCGGGTAAGGCCAACTAGTCAAGTTAAGA 11002 28 100.0 33 ............................ TAAGTATCAAGATAAAATTTACTGTAATTCCGG 11063 28 100.0 33 ............................ TCAATACTACTCGATGTACGGGATCCGTTGGCA 11124 28 100.0 33 ............................ TAATCTAGCACTAACTCTTTGTTTAATTATTTT 11185 28 100.0 33 ............................ TATCGGATTCTCTCATGATTTTAAATGCCCCAT 11246 28 100.0 34 ............................ TAACAACTTGACCACGATCAAGGCTCTTGACCAA 11308 28 100.0 33 ............................ TACAGGCGAATCAAGACAGCAATCAGAAAGGCA 11369 28 100.0 33 ............................ CGGAGAATGGTGTAACGGCGTGGATTTACGGTG 11430 28 100.0 33 ............................ TTTACCTTTGAATTTTTCCGTTGATAAGACTTC 11491 28 100.0 33 ............................ TAAGAGTCCAAGTGTATTGGGTTGGATCGGTGC 11552 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAATATTGCCAA 11613 28 100.0 33 ............................ TTGTTCTGACGCCGTGACGTAAGCAGATGTCCT 11674 28 100.0 33 ............................ TCAGAGACACCACTGCGTTGACGGTTTCGCCGG 11735 28 100.0 33 ............................ TTCTTGATCTCTGCCTTAGCTTGGTCGACCGTG 11796 28 100.0 33 ............................ CATCGCCAGCTACCTGGCAGCTGAAGAGTCAGA 11857 28 100.0 33 ............................ CTTAACGGCCATGACATTGAGAAGGCCAAGGGG 11918 28 100.0 33 ............................ CTCTGCTGTCAAGGAAGCTCTGGCCAACGCTCA 11979 28 100.0 33 ............................ CTTTTGGAATGCCGGTCTTGCCCGCCCACTGAT 12040 28 100.0 33 ............................ CAGCAAGGCTACTGTCAAGACTATCTTAGGTAC 12101 28 100.0 33 ............................ TTTCCTGATTAACAAATTCGTTGGCTTAAACGA 12162 28 100.0 33 ............................ AGTACTACTGGACAGTAGAAGATGGACAGGTGG 12223 28 100.0 33 ............................ TGGCTGCCGAAGTAGTCATAGTCGATGCATCCT 12284 28 100.0 33 ............................ AATTTTGTTGGTTTCAGTTGACCCCGCTTTTGG 12345 28 100.0 33 ............................ TTTTTCACTCATCGATGCCCTCTCTTCTTCGTA 12406 28 100.0 33 ............................ CGTCGTTGGCGACGGTGTTGTTTCAGAAGTGTC 12467 28 100.0 33 ............................ CCTCTAGTAACTCACATACGTCACCAGGGCGAG 12528 28 100.0 33 ............................ TTTCGAGTTAGCGGTGGTAAAAAGTGAAGTAGT 12589 28 100.0 33 ............................ TCAAAGCGGGTATTTTGGCTGTTTGCAAAGATC 12650 28 100.0 33 ............................ TTGAAGAACTGGAGTTGTGAGAAAATGCAAAGT 12711 28 100.0 33 ............................ CTCAATGGTGGCCCAGGTTGGGCCAATTGTGAC 12772 28 100.0 33 ............................ TTTACTCTGGCGCATCCCTGCTGCGGACGGCTA 12833 28 100.0 33 ............................ TCGCAGCCCAGGCCCGGGCTCTCTTGGCTTCTG 12894 28 100.0 33 ............................ TCGTTGCGCCTTTTTTGTAGATCCCGCCTTTTA 12955 28 100.0 31 ............................ CTTACTTTTTGTAAGCAAAAAAGCTAACCTG 13014 28 100.0 33 ............................ TCTAGCAAGCTTTCAAGCTTGCAAACACAATTA 13075 28 100.0 33 ............................ TTCCCATGAGTTCATGAGAATAGATGGAATTGA 13136 28 100.0 33 ............................ CGTGTTTAAGGCGTCTATGCATGATTGCCTTTA 13197 28 100.0 33 ............................ CGCCTTACTAGATAGTAGTAATAACATAATTCA 13258 28 100.0 33 ............................ CTAATGAAAATGAGTTGATTTCTCTCAAGTCTG 13319 28 100.0 33 ............................ TTAGTTTGATTCGGGCTGAATTGAAAGCACCAA 13380 28 100.0 33 ............................ TCACCGATTTTTCCGGAGATACGCATAAAGACC 13441 28 100.0 33 ............................ TTGTCATTGTGAATCAGTACACCGAGACCATCA 13502 28 100.0 33 ............................ TGGCCGTGCCGCCATTTACGGTGTCCCACAGTT 13563 28 100.0 33 ............................ CTTGACACCGTTTTTTAGTAGCAAGCCCGGGGA 13624 28 100.0 33 ............................ TTAAGAAGTTTTTTTATTTTTTCTTTTCGGCTA 13685 28 100.0 33 ............................ TTTCAGTTTGCGAAATATCGAACACGCAAACCG 13746 28 100.0 33 ............................ CTTCACAAGCGTTCTTAGTCAAACCATCGACTA 13807 28 100.0 33 ............................ GAAGGGTGAGACCAACGCACTGGCAAGATGTGG 13868 28 100.0 33 ............................ TCAAAGTTAGGGTTACGGCGCCAGGCCTTAAGC 13929 28 100.0 33 ............................ TCACTGGAAATGGAGGATTAGATGGCGAAAACA 13990 28 100.0 33 ............................ TCACCAAGAAGAAAAGCTTGTAGAGGGCTTATA 14051 28 100.0 33 ............................ TTATACGCGTTTCCGTCGGTAATGCAAGCATAA 14112 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 14173 28 100.0 33 ............................ CTGCCAACACTGCAGACTTACATGATCTGCTGG 14234 28 100.0 33 ............................ TGATCAGAACTAGAATCTACCCGGTTACGGGCT 14295 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 14356 28 100.0 33 ............................ CTGCTGAATGAACTCATCAACCGTGATGCTGCT 14417 28 100.0 33 ............................ CTCAGACTATTCTACTTCAGACTTCATCTATAC G [14439] 14479 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 14540 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 65 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGTGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGAATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATAATTAATGAAAAAGACTACATTACCGATGCCAAGACAAACGGCTACCGGTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //