Array 1 33638-31230 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGE01000131.1 Streptomyces sp. SA15 spades_001_65_len_T:57379_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33637 29 100.0 32 ............................. GACCAGGGCGCGCTCGGGGGTGTCGACGGCCT 33576 29 100.0 32 ............................. ATGACATAGCCCGTCATGGCCAGCACCACCGC 33515 29 100.0 32 ............................. GACGAGTACGACCGCGACGCCGGCGACAGCAA 33454 29 100.0 32 ............................. ATCAGGTAGTGGTCACCCCCGTCGGGGTTGAG 33393 29 100.0 32 ............................. AGCCTCTTCGGCCCCGACCGTAGGCGGGTCGG 33332 29 100.0 32 ............................. GTGCGGGCGGTCATCGGTTCGTCTCCTCGCTG 33271 29 100.0 32 ............................. GGGCGGGACGCGTCGGCGTCCAGCGACCACGT 33210 29 100.0 32 ............................. GCCGTCTACACCTGGTGGGGCTGGCTGAAGTA 33149 29 100.0 32 ............................. TCCGCACCCACGCAGTGGATGTAGCCCGACCC 33088 29 100.0 32 ............................. CACGTCGGCGCCCATCCGCAGGCCAGTCCACT 33027 29 100.0 32 ............................. GCTGTGACTTGCGGTCCACCGGGGACGTCAGA 32966 29 100.0 32 ............................. GCCCCGGCTGCCCCGACGGCTGGTGGTTCATG 32905 29 100.0 32 ............................. TCGGCGACGGTCACCAGCGTCGTGACCGTCGC 32844 29 100.0 32 ............................. CTGGGCCGGTAGGGCGGCCGGTCGGCGACATC 32783 29 100.0 32 ............................. GATGCGCGAGTGCACTAACGAGGGCGTGGAGC 32722 29 100.0 32 ............................. TCCTCGAAGAGGGCCTCGGCGTAGCCCTTGAC 32661 29 100.0 32 ............................. GTCATGCCGTTCGCGGCCTTGTCGACGAGGTC 32600 29 100.0 32 ............................. AGGGTTCCCCGGGTGTCGGGGAACCCTGTTGT 32539 29 100.0 32 ............................. TGCACGAAAGCGCACCGACAGAGCTGGTCTGA 32478 29 100.0 32 ............................. GACACCATCCCCGAGCCGTCCGTGATCGTCCT 32417 29 100.0 32 ............................. GCCGTCGCCTACCAGCTGTGGTCCGACCCCGT 32356 29 100.0 32 ............................. GACGGCACCGCAGCCAGCGGTGCGGGTTACAA 32295 29 100.0 32 ............................. CATCCCGGTTCGGAGACGAATCGTCTACAGAT 32234 29 96.6 32 ........G.................... GACATCGACCTGCTCCCCGGCACGGAGAGCCT 32173 29 100.0 32 ............................. ACCTGCTGCACGGCTTCGTCGAGGCCGCCGTA 32112 29 100.0 32 ............................. CGGACCAGGTCGGCGCGGAGTCAAGACCCAGC 32051 29 100.0 32 ............................. TTCCAGGGCGCCCTGATCATGGGCATTGTCGA 31990 29 100.0 32 ............................. CGCAACGGCACAGGTCCGTACAGCGAGTGGTC 31929 29 100.0 32 ............................. AACTCCTCCCACGTGATCGGCCTGGACGCCGA 31868 29 100.0 32 ............................. GACAGCCTGACGCAGCGGCTGGTGGCCGAGAG 31807 29 100.0 32 ............................. CCACCAGCATCGGCGCCGCCGCCCCGATCGAC 31746 29 100.0 32 ............................. GGCTGAACCCCCTTGTCCGGGCGGCCATGGGG 31685 29 100.0 32 ............................. GCCTTGCCCACGAAGCTGGCACAGTCGCTGTA 31624 29 100.0 32 ............................. GCATCCCAACGGGTGCTGATCTTGTCCTTCGG 31563 29 100.0 32 ............................. GCGCTGTTGGCCAAGGCCCGCAGCACTCTGTC 31502 29 96.6 32 ........T.................... GGCGGCACGGGCGCGGTGTTCAACGTGTCCGC 31441 29 100.0 32 ............................. CCGGACGTCTCCTCCGGCGTGAGCCCCGACTG 31380 29 96.6 32 ..............T.............. TGGGCGGCGATCTTCTCGTACTCCAGGTCGGT 31319 29 96.6 31 ..............T.............. GCCGGAACGATGGCGCTGCGGTGGCACGGGC 31259 29 86.2 0 .......A..............GC.G... | A [31235] ========== ====== ====== ====== ============================= ================================ ================== 40 29 99.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GCCGATGTCATGCACGCCCGCGAGCCAGACGCCGAGCTTGCGCCCGTCCACCTCGCCACCGGGCAACGCCTCGGCGATCAGCTTCCGCACGGCGCCGGGCAGCCACTCGTCCCACAGCACTCCGGCGACGGCGGCACTGTCTTCCATGTGCCGCCACAACGGCAGCCAGCCATCTGTGTCACGGTCATGTTTCGCCCACACGGCCCGCGCTGGTGCCTGAAGGCGACGCAGCAGGCCAGAGCGGGAGGTCCCCCCACTGGTCATGCAAGATGGATACAGCTAAATCACAGGAGGGCAGGCCGATTTGAGAAAACGAGCGTGATCCGAGGCCAAAGCGGGCGTACAGCGCCCTGCGGGCACGCTTGAGACGTATGGTGATCTATTTACTGCCCGACAGCACGACCCTAAGAGGGGGTATCGACCGTATGCACCATGTGTCGGAATCGGTGAAAGTGCATGAAACCCTGCCGTCGGGGCGATAAACCTCCAGGTCGGGCAGT # Right flank : TGGTGCCCCGTAACCGGTGAAGTATCAGCGCCCGTTCTCACCAAGGGCGACGCTCAGCAGAACCTCCACCAGACGCATAGCCGCGTCGGGCTTGCCCAGGGCGCGGGCGGCCTGGGCCATCGCCTCGCGCCGTTCTCCGGATGTGAGGACCGGTTCCAGGGCGCGGCGCAGTTCCCCGGCGCTGGCCCGCTCCCGCACCAGTGCCACGGCGGCTCCCGCCTGTTCGAGGTACAAGGCGTTGTGCTCTTGCTCGTCGCCGGCCGACGGCACCAGTGGCACCAGAACGGACGGCTTGCCCAGCGCCGTCAGCTCGGAGATCGTGCCCGCCCCGCTGCGCGAGACCACTACAGACGCCAGGGCGAGCACGTCGGGCAGTTCGGAGCCCACGAAGCCGTCGACCCAGTACCGGGCTCGGAGTTCGGCGGGCAGGTTCGCTGCGAGCTGCCTCGATTTCTCGACCCAGTTCGGGCCGCACTGGTGGACCACGTTGGCCACCGACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 43324-46405 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGE01000131.1 Streptomyces sp. SA15 spades_001_65_len_T:57379_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 43324 29 96.6 32 ............................T CGTTGGCACCTGGCATTTGAAGCAGGCCCCCA 43385 29 100.0 32 ............................. GGTACCCGCGCCCGACTGCGCTGGTGAGTGCT 43446 29 100.0 32 ............................. GATGCGCTAAGGCCGCAGGTCTCTGACCTGCG 43507 29 100.0 32 ............................. ATGGCCACGAACAGAGTGGTCCACCAGCCCAG 43568 29 100.0 32 ............................. TGTGCCAACACGATCGTGACTCATAGCCGTGC 43629 29 100.0 32 ............................. GATGATCGGCACATCCGGGGTCGGGGTGGTGT 43690 29 100.0 32 ............................. ATCACCAACACCGGCTCCACGGGCGCCGGCCT 43751 29 100.0 32 ............................. ACGTCCTAGTGCGGGGGCGGTTCGGGGATAAT 43812 29 100.0 32 ............................. CTGACCGACCGCTGGACCGAGCTCTGCCCCAC 43873 29 100.0 32 ............................. GTCCGCGGCCTGGACGACGCCGTGGAAGTCGG 43934 29 100.0 32 ............................. CCGTCTCGAAGCGGTACACCACGGTCAACTCC 43995 29 100.0 32 ............................. CAGGTCACCGGCGCCATGCGCGGGGGTGAGTG 44056 29 100.0 32 ............................. GCGCCCGCGGCGAGCTTGCCGTTCGGCACCTT 44117 29 100.0 32 ............................. TTCGCGTATCTCACGTGCAAGTTGGTGCTTGA 44178 29 96.6 33 ............................A CCACAGGCGGAGTAACGACAGGTTCAACAACGG 44240 29 100.0 32 ............................. AAGGCTTGGCACGAAGCCGTCGACGCCACCGT 44301 29 100.0 32 ............................. ACGAGGGCCGTCCACTGTCAGTGGCAGCCCGT 44362 29 100.0 32 ............................. CAGCTGGAGAAGCGGTTCGCGCTGAAGGGCGA 44423 29 100.0 32 ............................. CTCGCAGGTCAGCGCAAACGAGCGCCGGCCAA 44484 29 100.0 32 ............................. AACGGTGCAGTACGAGGATCTGGTCCGGACGT 44545 29 100.0 32 ............................. GATTGCGGCATAGAAGGGGAGGTCCGCCGGCT 44606 29 100.0 32 ............................. CGAACGACCGAAGCCCATTCACCCGGCGTTGG 44667 29 100.0 32 ............................. TCGTCGGCGAAACCGGCATCGTCGAGCGGCCA 44728 29 100.0 32 ............................. ACAGCACGCACAGCGGGTTCCCGCCCGGCCCG 44789 29 100.0 32 ............................. GCCGAACTTGCCACCGGGGAACGGGCGCAGAA 44850 29 100.0 32 ............................. GGCCCGCAGGGTCGTGTCCGGCGCGGTCACTG 44911 29 100.0 32 ............................. GCGTCCCCGAAGCTCAGCGCCGTGTGCGACGT 44972 29 100.0 32 ............................. TCAGATGGTGGCCCGAGGTTCGCCGCTACTTG 45033 29 100.0 32 ............................. CACACCGTCTGTGCATGGAGCCGACCATGACA 45094 29 100.0 32 ............................. CTCCAGCGCGGTTGCTGTTGGGGTTCACAATG 45155 29 100.0 32 ............................. GGGCCGAGCCACCTGGTGGAGGTGGCGGCGAC 45216 29 100.0 32 ............................. GCGGGCACGAGGTAGGGCTGGTCGGGCATGCT 45277 29 100.0 32 ............................. TGGCCGGCGTCGCCACCGACGTCCTGCCAGGC 45338 29 100.0 32 ............................. TGGGTACAGGTCGTCAGCGATAGCCCGGTTGA 45399 29 96.6 32 ............................T CGCCCAGTTCTCCCATGGTCAGCCGGTCGAGG 45460 29 100.0 32 ............................. GCAGTCAACATGCGCACGTACCAGTCGACGCT 45521 29 100.0 32 ............................. GCCCAGCTGGACAGTGTTGGCTCCGGCGGTGT 45582 29 100.0 32 ............................. CGTGGCTGCTCGGGCCGATCCTGCCGTGGTGA 45643 29 96.6 32 .................A........... CACCAGGGCACCGGCGGGGTGTCCTCCGCGCT 45704 29 100.0 32 ............................. GACATGGACTGGTGCGAGGTCGAGGGGTACGC 45765 29 96.6 32 ............................G CTCGACGAGCAGATCGCCGAGGCCCATGAGGA 45826 29 100.0 32 ............................. GACGTCAAGTACGCCTACGACAACCAGAAGCT 45887 29 100.0 32 ............................. GGGGCAAGCCGCTTCCGCAGGTGGTCCGCTTC 45948 29 96.6 32 ..............A.............. CACTACATCGACGGCAACGACGGACGAGTCGG 46009 29 100.0 32 ............................. GCTGCCGCACGGGCGTTGGCGTTGGCGAAACG 46070 29 93.1 31 .C......T.................... GTTACCATCCGGTTCGGGGTGGTCGCTGCAC 46130 29 96.6 32 ..............T.............. GTGGGGCGAAAGCCCGAGCGTGACGGTTCGAA 46191 29 100.0 32 ............................. CATTCGGGTCGCGGTCACCCGAACTCATACGG C [46208] 46253 29 100.0 32 ............................. GGTGGTCGGACGGCAGCGGCAGCGGAATGGTG G [46274] 46315 29 96.6 32 .......................A..... CTGACGATCGAGTCGCTCGGTGAGATCGACGT 46376 29 72.4 0 ..........TG.....AA..TA.T..G. | T [46380] ========== ====== ====== ====== ============================= ================================= ================== 51 29 98.8 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTCCGGTTTCAACCACGATGAGACGAACGATTACGGGCAGGCGAGCTGGTGACCGTCATCGTCCTCACCAACTGCCCAGCAGGACTGCGTGGTTTCCTGACCCGCTGGCTACTGGAAATCTCTGCGGGCGTGTTCGTGGGCAACCCATCGGCCCGGATCCGCGATGTGCTCTGGGACGAGGTCCAGGAATACGCGGGCCAAGGCCGCGCCCTGCTTGCCCACACCACGAACAACGAACAGGGCTTCACCTTCCGCACTCACGACCACGCATGGCACCCCGTCGACCATGAAGGCGTAACCCTGATCCACCGCCCCGACTCGAATCCGTCCACGGAGGCGAGCCGCCCGACTGCTGCGCGTTCCGGATGGAGTAAGGCGGCCAAGCGCCGACGTTTCGGAGGGGCCTGATGGATATTGCGGCTCGTTTGACCCAATTGCCGGATTCGGTGAAAGTGCTCAAAAACCCGCCACACCTGAGATGAAGCCCCAGGTCGCGCAGT # Right flank : CGGCCCAGCACGCCCCGCCTCTAACCAGATGGCTGACCCAGGGTTCGTTCCCGATAGGCACCGGCAGTCCCCCCCGCCTGCCGGTTTGGCGGGCGTCGGGATCCGCCGGGAACGTCGGTGTTCCTTCGACCTGGGGGAGTTCCCCACCGAGCGGGTGAAGGGGGAGTCGGCGCTCGAGTGGTTCCGAACCCATGGGGTGGGTCCCGTCTTCCAGCCGATCGCCAGTACTTACTGCACATGCTCCCTATGTCGCGTGATGGGCTTACAGGTGGTTGGTGAGCGCCACATGGGCGTACTTCAGCGCCGCGTACGAAGGCGAGCGTCATGGCACTCGCAAGGGATCTGGCAGGTCGATGTGTCGTCCGGCCTGCAGGTTGGTCACGATACCTGCCAGGCTTGCCGCCACGTGTTCTGTGCCCGAATGATCGGCCAATCCTCGGGGCAAGCGGGTCGTTGTGGGTGTCTCCACCACGATCAGGTAGCTAACAGCGATGAGGCGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-40] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //