Array 1 48823-46753 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASER01000026.1 Acinetobacter baumannii TG00314 TG00314_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 48822 29 100.0 31 ............................. ATCTGTACGTTTGGGGAAAAGGCTCGTCCAA 48762 29 100.0 31 ............................. GTGTTTAGAGGACTGAAAGTTCGCATAATAA 48702 29 96.6 31 ............................T GAACGAGTAGGAGCAGCAAGTAAAACAAATT 48642 29 96.6 31 ............................C CTCTTTAGCTAACTGGTATGCCCTATCAGCA 48582 29 100.0 31 ............................. TCTTGCATGTCGTAAATTGAACATTCTTTGA 48522 29 100.0 31 ............................. CGTTTTACGGCCAAGTCCCGTTCTTCTTCGT 48462 29 100.0 31 ............................. CGCAGCCGTCGTTATTCGAACAAATAATTAC 48402 29 100.0 31 ............................. CTCGAAAGGTTCATAAGGCTTAGCGCCCAAC 48342 29 96.6 31 ............................G GCATCAACAGGCGCGGCTCCTTATCCGGGAA 48282 29 96.6 31 ............................T CAAGCTACTCCAAATCCGTCTGAAACGATTG 48222 29 96.6 31 ............................C AATACACCAGTTCCTTTAAGAACATGTAATA 48162 29 100.0 31 ............................. GTTTTGAACACGATGAGACCGATAATTAAGC 48102 29 100.0 31 ............................. TACCACTGACGATGATGATAACGATGTGACT 48042 29 96.6 31 ............................G GCCTTGTGTGTTGTCACCCCCATAGGTGCAA 47982 29 96.6 31 ............................T GAATTTCGTCACGTAAGCCCATATCATGCCC 47922 29 100.0 31 ............................. GGACATAGTGAACTTGGTACAGGCAATATTT 47862 29 96.6 31 ............................C TCATGACGATGCTTTTCTAACAAAGTCATCC 47802 29 96.6 31 ............................G TTAGCTAAAGGTCGTGTGATTAAGTGCAACT 47742 29 96.6 31 ............................T ACGGGTTGTGGCTCAGATTATGTTCCGGGGA 47682 29 96.6 31 ............................C AAAAGCTTCCCTGATTTTTACCGATTAGCAT 47622 29 96.6 32 ............................T GCCAGCACTTTCAGACCATCCGATTTTCATGG 47561 29 96.6 31 ............................T CTAAAAGATATGTTGGTTCATGAGCGGCTGC 47501 29 100.0 31 ............................. CATGAATATGCAGAGATGTGCCGCCGTGAAG 47441 29 96.6 31 ............................T GAAATCGCTAGTTATGCGTTTGATGTGCTTT 47381 29 100.0 31 ............................. ACCAAAACCACTGAGACACTTGATTTAGTGG 47321 29 100.0 31 ............................. GGTCCACATGAAAAACTAGCTTCCACGACAT 47261 29 96.6 31 ............................T AAAACCGTCTATATGTTCTACCGTAGCAGTA 47201 29 96.6 31 ............................T CAAGAATTAAAGGAAATGCCCCAAACTCAAC 47141 29 96.6 31 ............................G CACGAATACGCTGAGATGTGCCGCCGTGAAG 47081 29 96.6 31 ............................C TGAACAGTATGCCGATTTAATGAATCCTGAA 47021 29 100.0 31 ............................. GTTACGCAAAAGCCAGTTGATTGTTATGTCT 46961 29 93.1 31 ............G...............T ATCATTGCGCGACAGAACGCATCAATTAATG 46901 29 86.2 31 ...GC.......CC............... GATCTATGCAAGATTTATTGGTCTACATTAG 46841 29 89.7 30 ...TG.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 46782 29 82.8 0 .G..G...................AT..T | C [46777] ========== ====== ====== ====== ============================= ================================ ================== 35 29 96.9 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAACAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTCGACCTCGCTGATCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAAGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACAT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 53913-55019 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASER01000026.1 Acinetobacter baumannii TG00314 TG00314_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 53913 28 100.0 32 ............................ TTAATGAGAATTTTTTTGACATTCCCCCCTAA 53973 28 100.0 32 ............................ TTATCCGGTGCAAAATAATAGCCTAAGCAGCT 54033 28 100.0 32 ............................ AAATCTAATCCGACAACCAAAACAGTTAAACC 54093 28 100.0 32 ............................ ATATGAATGACGCTGGTACATATCCAATCGCT 54153 28 100.0 32 ............................ TCCAGCTATTCCACCTGAGAGTAGTACTATTT 54213 28 100.0 32 ............................ TGAGCAGGTCGGTTATTCTGAACCTGAAAATA 54273 28 100.0 32 ............................ ATAGTGGAAATACACGTAAGTTATTGATTTAT 54333 28 100.0 32 ............................ GATTATTTTTATGTCACTAATCCAAATCTTGG 54393 28 100.0 32 ............................ TTATTTGCAGCGTTTAATACAGGCGTATTTGT 54453 28 100.0 32 ............................ TTACCTACGAATGAAACAGTTCAACTTATTTT 54513 28 100.0 32 ............................ GACACCCCAGCATCATTGGGAACACAAATTAT 54573 28 100.0 32 ............................ TGGTCTGGTGGGCGTGGTGGAAAGCTGTCAAA 54633 28 100.0 32 ............................ TTAGCAGCATTCGCATTTGCAGTTTTGTTTTC 54693 28 100.0 32 ............................ CTGAGCAGTTGTCTGGTTATTCTGGTTTGAAT 54753 28 100.0 32 ............................ CAAATCAAAAGTGCAGTTGCTGCCTCAATAAC 54813 28 96.4 32 ...A........................ TGAGGGTGCCACACATTGGCAGGTTGGAGTGT 54873 28 96.4 32 ...A........................ TCTTCATCTGTTACATATGAAGCAAGGATCTT 54933 28 96.4 31 ...A........................ ACATTCAAAGAGGCTCATCGAATCCAATCGA 54992 27 78.6 0 A..T........TC........C.-... | A [54996] ========== ====== ====== ====== ============================ ================================ ================== 19 28 98.3 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGTTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : ATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCATCCCAGCATTTTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //