Array 1 18372-15761 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIMN01000011.1 Limosilactobacillus reuteri strain KLR2006 NODE_1_length_134080_cov_3.37754_ID_4698, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 18371 36 100.0 30 .................................... TAAATCAGCGCTTAACTGAAAAACAATTGA 18305 36 100.0 30 .................................... GTCTTGAAGTCTTCGCTTGATACCTTGGAG 18239 36 100.0 30 .................................... AGTTTGCCGTGATAAAGCTGAGAGGTGGAT 18173 36 100.0 30 .................................... ACGTATTTAGTTGAAGAACATACGGCGATT 18107 36 100.0 30 .................................... AATGGAATGTATCTACATTGCCGCTTTCCT 18041 36 100.0 30 .................................... TAAAGAAGCTGTCATAAACACATTCTTTGC 17975 36 100.0 30 .................................... TCAAACAAACGTGGAGGCAAATCCCCTCGA 17909 36 100.0 30 .................................... CCCGTATAACTTTGAACGATTTCCACATTC 17843 36 100.0 30 .................................... CTGGAGCTGGAGAACCTTCTGCGAAGAATT 17777 36 100.0 30 .................................... CCCCACGCATGAACACGTTGCGAACGGTTA 17711 36 100.0 30 .................................... AAGGATTTATGAACTACCTTAACGATATGT 17645 36 100.0 30 .................................... GCAGAAAAAGTTGATAATGTTATCAAACTA 17579 36 100.0 30 .................................... TTAGCACGCTTGATATTGTTGATGACGCTA 17513 36 100.0 31 .................................... TTGAACTCATCTTCATAGTTTGCTTCTCCAA 17446 36 100.0 30 .................................... AAGATACCGGTCGGATAATGCGCATGGAAT 17380 36 100.0 30 .................................... TCAATAATAGTGATACGGTTATTTCAACAG 17314 36 100.0 30 .................................... TAAATGACGTGACTGGTATTCACGGCTCAC 17248 36 100.0 30 .................................... TAAAAAATCTGAATCTCACAGCCAATCTGC 17182 36 100.0 30 .................................... TACTTACATCATCAGTGACCTTCTCACCGT 17116 36 100.0 30 .................................... CTTGATAATATCTGGAAGTAAGTAATATAG 17050 36 100.0 30 .................................... CCACAAAAGTAATTAATGGTATTCCCAAAG 16984 36 100.0 30 .................................... TAATCAACTGGCCAATACCCGCGCTAACGC 16918 36 100.0 30 .................................... AACGATGCCTGCGCATCGAGCATTGAGTAA 16852 36 100.0 30 .................................... TAGTTCTTTGAGTTCCATAGCTGGTTCCTC 16786 36 100.0 30 .................................... CATACACCATTGGCTTTTCGAGGGACTGTG 16720 36 100.0 30 .................................... GGACTAAAAAAGATCGCTATTTCGCTATGT 16654 36 100.0 30 .................................... CCTATTCAAAACCCAGATGGCTCATATTTT 16588 36 100.0 30 .................................... TAAGTCGTCAACTTTTTGCTGTAATTGTGA 16522 36 100.0 30 .................................... TTACTACTGTTACGGCAACCGGTGGGGTCA 16456 36 100.0 30 .................................... TTGTCTCATCAAATTCTGTGTTGCTAACAA 16390 36 100.0 30 .................................... TCCCGTGAACTGAGTATGGTTGCTGAGGAC 16324 36 100.0 30 .................................... TACCAGCAATAACATCTTTTGCAAAAGGTG 16258 36 100.0 30 .................................... TGAGTGGTCTGGTCATCGCTTGACGAAATA 16192 36 100.0 30 .................................... AAGCCTTGCCCTACATAGTTCTTTATGTTG 16126 36 100.0 30 .................................... CTTATTTGAAAATAATTGGCGTTCCGTTGC 16060 36 100.0 30 .................................... TGTCGCCCGTGTGCCAATCGCTGTTAGCTA 15994 36 100.0 30 .................................... AACGGATAGCCGATGAACAAGCTGAACAGG 15928 36 100.0 30 .................................... TAGCATAATGAACAGCATATAACGCACTAG 15862 36 100.0 30 .................................... CTTTGATCAGTTACATATAGCGCATTAACG 15796 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 40 36 99.8 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : AAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCTATTACTAAAAGAGGTGAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAAGCTGGAGCGCAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGATTTATTGGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //