Array 1 165361-169119 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE557322.1 Rubellimicrobium thermophilum DSM 16684 R1_scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 165361 29 100.0 32 ............................. CGGACATACTCGCCGTTGGCGTTCGCGCCGCG 165422 29 100.0 32 ............................. TCGTGGCGCGCCTTGATCTCGATGCCGTCGAC 165483 29 96.6 32 ............................T CTCGATTGCATCGAGCAGCGTGATTTCGGGCA 165544 29 100.0 31 ............................. CTGGTCCACACGCTGCGCGCGCTTACCGGCC 165604 29 100.0 32 ............................. GCGGCGGTGCGGGGCTGTTCGTGACGTGGCAT 165665 29 100.0 32 ............................. CCGCGCTGACCCTGCGAAGGCTCCCAAACCCG 165726 29 100.0 32 ............................. CGGGGGGATGAGGAATGACCCCTCCCCAGCCC 165787 29 100.0 32 ............................. ATGGGTCGTGGTGTCGGACATGGGGTAGCCTT 165848 29 100.0 32 ............................. ATCTCGGTGAGCCATTCGGCGCGATCGCTGCT 165909 29 100.0 32 ............................. CCCACCGAGCAGGATGTGCCGGAGCGCGTCGC 165970 29 100.0 32 ............................. AGCGCGCTGGGCTGATGGCCCGGTGGGCGGCA 166031 29 100.0 32 ............................. CTGTAATCGTCGGGGTTCTCGCCGACCGACGC 166092 29 100.0 32 ............................. CTCGTCGATCAACGCGGTCTTTTCGGCAGGCG 166153 29 100.0 32 ............................. CGGGCGATGTTCACCATTCCGACTGGTCCTCC 166214 29 100.0 32 ............................. CCGATGGGCGCGCCCTTCTTCCCGGTGATGCC 166275 29 100.0 33 ............................. GGACGCTCCGCCCACGCCTCTGCCCACGGACCC 166337 29 100.0 32 ............................. ACCACCGCCCCCTTCGCCAACGCCGACGAGGC 166398 29 100.0 32 ............................. CGGGCGCCAGTGGGTGGGCGCGTCACCCTCGA 166459 29 100.0 32 ............................. CGCCGCGAGCGCCCAGCCGATCAGCACCGACA 166520 29 100.0 32 ............................. CCCAGCTCGCTCGGCTCCTCGACACCAGCTGG 166581 29 100.0 32 ............................. CGGCCCCCTTGCGCTCGCGAGCTTGCGAGCGG 166642 29 100.0 33 ............................. GATTTCAACGCCCCCCGGGTTGGTCCGACGCCC 166704 29 100.0 32 ............................. TCCGCCTGGTCGGCGCGACGCTCGACGGCGCC 166765 29 100.0 32 ............................. AACACGGGCAGGCCCGCCCGGTCAAACGCCTC 166826 29 100.0 32 ............................. CCGTCACCGCGCTGTCGATCAGCCACGACTCG 166887 29 100.0 32 ............................. TGGACGCCGAAGGGCAGGGCGGGGCCGCGCAA 166948 29 100.0 32 ............................. CGGCGCCACGCCTCGATGTGCGAGACACGGGC 167009 29 100.0 32 ............................. CCGGCGATCCAGTCACGGACGGGCCAGCCCGA 167070 29 100.0 33 ............................. GGCGAGCGCTGCTTTGAATTTGTCAGGCGTCAT 167132 29 100.0 32 ............................. GCCTTGAACTGGTCCGCGACCTTGATCTGGTG 167193 29 100.0 32 ............................. CCCGCCGGTGCACGGCGGGCTCGTTCTCATTT 167254 29 100.0 32 ............................. CCGGAGCCGTCGCCGGAGCCGGAGCCGGAGCC 167315 29 100.0 32 ............................. CCAGCACCCTTCGGCGATCAGGGGAACGATGC 167376 29 100.0 32 ............................. CCCGCGAGGTTGGCGCGCGCGAGGTCGGCGCG 167437 29 100.0 32 ............................. CCGTAGCCGAAGCCGGAGCCGTAGCCGTCGCC 167498 29 100.0 32 ............................. CTGCTGATCGGTCATGAGGTCCAGGCCTGGCT 167559 29 100.0 32 ............................. ATGGACCGGCGCTTCATGGACGTCCCGCCGGG 167620 29 96.6 32 ............................C TGGTCTACACGCTGCGCGCGCCTTACCGCCCC 167681 29 100.0 32 ............................. TAGGCCGCCACCGCGTCGTCGTGTCGCTCGGC 167742 29 100.0 32 ............................. ACCTGCGAGGACGCATCGCCCGACGCCTGCAT 167803 29 100.0 32 ............................. CGTGGTGGCAGCATCCCCGCCTCAATCCCGAC 167864 29 100.0 32 ............................. GCGTCGATCGAGAGTCGGCGGCCCAAGATGCT 167925 29 100.0 32 ............................. CCCATGCCGCTCCGGTTCCTGCCGCCGCAGAG 167986 29 100.0 38 ............................. CCGGAGCCGTCGCCGTCGCCGTAGCCGTCGCCGTAGCC 168053 29 100.0 33 ............................. CCGGCCTGCATCGTGAACGTCCCGCCGGTTGAC 168115 29 100.0 32 ............................. CGGTCGCGGCGACTCTCGTCGCCCCCCGTCAG 168176 29 100.0 32 ............................. CTGATCGCTCCGCCGTTGACCGCGCCGTTGGC 168237 29 100.0 32 ............................. ATCGCCCGCTACCGCGAGGCCATGGATGGCCC 168298 29 100.0 32 ............................. CCCCGCGCGCAGGACACTGCGCCTGCCCTCTC 168359 29 100.0 32 ............................. TCGGGAGCCCGGTTGAGCCGGTAGCCGTAGTC 168420 29 100.0 32 ............................. CGGATCATCTGGTGAATCGCGCCGTTTGCGGC 168481 29 100.0 32 ............................. TCTTCCAGGACACCTGCAGCGGGTTGAGGCCG 168542 29 100.0 32 ............................. CGGACATCGTTGCAGTCCCAATAGCCGCTCCA 168603 29 100.0 32 ............................. CGATAGCCTTTGCGCCCGCCGGCCCGTGCCAA 168664 29 100.0 32 ............................. TCAGCGCGCGCCTCGGGCAGCGTCGCGCCGGC 168725 29 100.0 32 ............................. GCGAGGACGGCGGCGGCGCCGGGCATCTCGCG 168786 29 100.0 32 ............................. CGCTCGGACTGGGCAACCAGCTCCTGCGCGCC 168847 29 100.0 32 ............................. CCGACATGGCCGCCGCCGTCGCGGGCGAACAC 168908 29 100.0 32 ............................. TCGGACACGAAGCGGGTATCGCCCAGGGCGCG 168969 29 100.0 32 ............................. GGCGGAGAAAAATTCCGCCGGAGTCATGATTT 169030 29 96.6 32 ............................T TACGCCGTCGCCCGGGGTCTCGATTACGTCGC 169091 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 62 29 99.8 32 GTGTTCCCCGCACACGCGGGGATGACCCG # Left flank : TGTCCGCCGGAGAGCTGCCCAAGCCCCCGCCCCCGCCCGAGGCCGCCGGCCCCGCCTTCCCCGACCCGGAGGACGGCCCATGATGGTGATCGTGATGACGAATGCTCCGCCGAGGCTTGCGGGGCGGCTCAAGGTCTGGCTCCTGGAGGTGCGGGCGGGGGTCTTCGTCGGCGACTACTCGGCCCGCACGCGGGAACGGATCTGGGCTCAGGTCGAGGCCTATATCGAGGACGGCGATGCGGTGATGGTCTGGGATGCGCCCACCGACCAGGGCTTCGATTTCGCCACCGTGGGTACCAACCGCCGGATGCCGGTTGACTTCGACGGGCTGAAGCTGGTCAGCTTCTATCCGAAGGATCATCCGATGTCGCAGCGCCCCGCCCGTCGCCCCCGCGGACCGGCCCCCGAGACCCCGGTCCCGCCGGCGAAGCCCGACCCGAAAACCCGGTAGGCTCTTTGACAGTTGAATTTCAGCGGTAGCTCAGATACCTGCAACAAGA # Right flank : GTATCCGGGCCGGGTGTCGGTCCCCAGCATCTCCTCGAGCGAATAGCCCAGCTCCTTGGCGACAAAGGTGTCGATGTCGCCATGCTCTTCCTCGATCCGGTCCAGCGCGGCGTTGATGGCGTCGCGCATGTTGACCGGGACAAGGGTGCCCACGACAAACTGGGCCTTGGAGCGCGGCTCGTAGCGAACCTGATACTTGGTTTCGGCCTCGGTGTTCCTCGGGCGGGTTACCGATCCGGGGGCCAGAGTGTGTAGGCGAACGCTATCAGACTGTTCCCCTCCTCCTCGAACGCCTGGATCATCACCTGATCGGTCTCCATCTCCTCCGGCTGCGCCGGCCACGTCTGTTCCCCGATCTGAATCTTCAGCGCCCCGCTCTCCGTCACGATCTTCTCTGCCGCTTCCTCCGGTTTGTCCGCGTTCAGGAAAATCAGTTCCATGAGCGCCATGTCGAGGAACATCTGCGGGTCGCTCTCCTTCCTCTCCCGTTCGATCATATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //