Array 1 18448-16537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQUS010000016.1 Corynebacterium diphtheriae bv. mitis strain 08-16 NODE_16_length_60670_cov_49.563599, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18447 28 75.0 25 TCA..CA............A.....C.. GGCGGTCCAGTTCTCAAAGTCCCTG T [18422] Deletion [18395] 18393 27 82.1 33 ..........C...GAC.....-..... CAATACATGAGGATTGACAGTGCTGATTATGAC 18333 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 18272 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 18211 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 18150 28 96.4 33 ..........C................. CATGATGCCTAGCAACCGATCTTGATTAGTCTG 18089 28 96.4 33 ..........C................. CAGCACAGATTCTTTCGCCGTTTTGGTCGGTGG 18028 28 100.0 33 ............................ TAGCCATCATTCTCTCCTAGGGCCTCTGAAAGG 17967 28 100.0 33 ............................ GCGCCGCTGTCGTCAAGGTCGGCGATGAGGGTG 17906 28 100.0 33 ............................ GGCCTGTGATCACGTAGAGCATTCCCCACCTCC 17845 28 100.0 33 ............................ ATTGCAATTAGCTCACCGCGGCGTGGCTTGCGG 17784 28 100.0 33 ............................ GCGAAACTGCCGGGAACGCTCGGAGCAAACCTG 17723 28 100.0 33 ............................ GACCGCTATAACGACCTCATGGCAGACCGGTAC 17662 28 100.0 33 ............................ AGAGTGAGATCCTAGGGCTTGAAGACGATCTCG 17601 28 100.0 33 ............................ GACAGCGCGGGCGGCTTCACGGGCCTGTTTGCG 17540 28 100.0 33 ............................ GTCTGGATCGGTGAGCGCATCGGGCTTGGTCAG 17479 28 100.0 33 ............................ GTCTGGATCGGTGAGCGCATCGGGCTTGGTCAG 17418 28 100.0 33 ............................ GCTGATATGGCCAGCAAATCCGAAGTGCAGCAG 17357 28 100.0 33 ............................ TTCGCTGATGAGCTTGGTGGCTTTCTGCCATGC 17296 28 100.0 33 ............................ GTGTTGGGCGAAGAGGATGGTTTTTTGGGTTAG 17235 28 100.0 33 ............................ CTGAATCCACCGTGAAGCGCGCCGTAAAAGAGC 17174 28 100.0 33 ............................ TTGCTGCTGCTGTTTTAGAGGCGGACGGCACGG 17113 28 100.0 33 ............................ GCCCAGGTGAGGGGCCAGAGGCGTGGAAATTTG 17052 28 100.0 33 ............................ TGATTCTCCCTCGTTGTTGTGCACCCCAACCCA 16991 28 100.0 33 ............................ AACGTCTTGAACCTGGAATGCGAACGTTCCGCG 16930 28 100.0 33 ............................ CCGATAAAGGCTTCCAGTTGGCGTTCCATAGGG 16869 28 100.0 33 ............................ GGCGGTGACCCTTGGGGCGACATTGTCGAGGCG 16808 28 96.4 33 ......................T..... ACAGATGATGCGTAATGAGCGTGTCGGTGGTGG 16747 28 100.0 33 ............................ GTCACATCGTTAATAGTATTAATAACAGTTCAG 16686 28 100.0 33 ............................ CAGGCGGTCTACGGCTTGCAGGAACTCCATAGG 16625 28 100.0 33 ............................ TTTTGGTACTCGCGTAGTCGCTGGGGTTTAGGC 16564 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 32 28 98.0 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTTGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //