Array 1 169365-168843 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SSNN01000001.1 Salinigranum halophilum strain ZS-5 Scaffold1_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                        	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	=======================================	==============================	==================
    169364	    38	  74.4	    30	...G.GGT....ACG-.GG....................	CGCCGATGGTCCCGAACTGAACACCCACGA	T [169357]
    169295	    39	  87.2	    30	...G.........AG...C..........A.........	CGCCGACGGCGTCGAGGTGGACAACCAGCA	
    169226	    39	  92.3	    30	....A.T........G.......................	CGACGACGGCGTCGAGGTTGCCACACACGG	
    169157	    39	 100.0	    30	.......................................	CGCCGACGGGGCGGAAGTGACCGAGTATCA	
    169088	    39	 100.0	    30	.......................................	TGACGACGGACCGGAGGTCAACGTCCACGA	
    169019	    39	  87.2	    30	...G.........A..C.C..............T.....	CGACGACGCGGCGGAGGTCCGTCGATACGA	
    168950	    39	  82.1	    30	C...A.T......CGGG......................	CGCCGACGGACGCGAGGTGAACCAGCTCGG	
    168881	    39	  69.2	     0	A..GA.......TCGGG.C.....T...........GG.	|                             	
==========	======	======	======	=======================================	==============================	==================
         8	    39	  86.6	    30	GACCGACCCGACGGACACAGACACCGACGGCGACGGCCT	                              	       

# Left flank :   GACTGAGTCATGAGCGCACGTCTCGCCGTCCCTGCCACCGTTGTCGTCGCCGTCGTCTTGTTCGCCCTCACCGGCGGCGCCGTCGCTGCCGGGTCCGACGTCGTAGCTGTGAACAGCGTCACGCTGTCGGGGGCGGGCGTCGTCGCGGACGGAGAGCGACCGACGGTCGCGGGGTGGCGTGCGGTGAACGTCACCACTTCGGTCACGACGGGGACGGACACGTACGACGTCTGTGCCGACGTGCATGGTAACACGGCCGGGACAGCCACCTGTCGGCAGGTCGATGGGACGAACGCGACCACGAACGTCACGCTGACGCTCGACGGGTTCCCGGAGAACGCGACCGGGAAGCGGGACCTGACCGTCACCGTACGTGCCGCGAACGCGACCAACACGAGCGCCGAACCGCTGGCGAGCGGAACGGTCGGCGTCCGGGTGCTCGGGGCGGCGGGCGACGTCGACGGCGACGGACTCGGCAACCGAGAGGAGTTCGAACGCGG
# Right flank :  CGACGACGCGGCCGAGGACGCGAGTGGTGGGGACGTCTCTCCGGACGACTCGAGACTGGTCGGTGCGCTCTCGCCCACGCCGGGCGTCGCCGTCGGCGCGCTAGCTGGCGTCTCACTCGCTCTCGGAGCCGGAGCCGTGTTGTTCTACCGCACACGCGGGTCGCCGTGGACCGACTCGTCCGGAGGCAGAACGGAACAGGTCGACGTGGAACCAGGGGTGGAGACCGACGGTGCGACCGAAGGCGGAACGGGCCACGTCGCGAGAGCGACGACGGACGAAGAGCGAGTTCACGAGGTACTCGACGAGCACGACGGGCGGGTGCGACAGTCGGTCGTCGTCAGCGAGACAGGGTGGTCGAAGTCGAAAGTGAGCCGGGTGCTCTCGGGGATGGCGGACGACGGCGCGGTTCAGAAGATACCCATCGGGCGAGAGAACGTCGTCGTACACCCCGACCGAGTTCCCGAAGGGGCGGAGTCACCGTTCGACTCGTCCGACGAGT

# Questionable array : NO	 Score: 2.52
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GACCGACCCGACGGACACAGACACCGACGGCGACGGCCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [1,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-8.60,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [12-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.78   Confidence: MEDIUM] 

# Array family : NA
//