Array 1 30-198 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHYZ01000220.1 Liquorilactobacillus vini DSM 20605 contig00343, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 30 37 100.0 29 ..................................... ATCGCCAGTTTTTAAATCTTCATATTTCA 96 37 100.0 29 ..................................... TGATGAATTTGTTAACTTAGGTATGTTTC 162 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 3 37 100.0 30 GTTTTACCGTTACTGAATCCTTAAGAGTACAAAAACT # Left flank : CCACATATTTTGTATGGTCGACTTGTTGGG # Right flank : TGCGTGATTAATGCTTAGGCCAACCGAAA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACCGTTACTGAATCCTTAAGAGTACAAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 48-1002 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHYZ01000168.1 Liquorilactobacillus vini DSM 20605 contig00196, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 48 36 100.0 30 .................................... AAACTGGTAAGCAGCCGTTTTCACGTTCGT 114 36 100.0 30 .................................... CAACCTAACAAGTTGGAATCAAACGATGGA 180 36 100.0 30 .................................... CTGAAAAATTAGGCGTGGATAAATACATTG 246 36 100.0 30 .................................... CGCCAAATATTCCGACATATCCAGCAAGAT 312 36 100.0 30 .................................... ATCAGTTGTTAATGAGCTTGTGTCCGTTGA 378 36 100.0 30 .................................... GCGGGAATCTATCTGATAACGCGTCAATAA 444 36 100.0 30 .................................... CAGCTGATGGAGTATCACCAACGCTCGCTG 510 36 100.0 30 .................................... CACTGTAATCGACTTCGCTAAACTGTGCAT 576 36 100.0 30 .................................... TTAAAAATTGATCACCGTACTCTTTGAATT 642 36 100.0 30 .................................... TTAATATATTTGCGGCTCGGACTGATATGG 708 36 100.0 30 .................................... GTACATTATATACTTAGCTAAGTAGAATGT 774 36 100.0 30 .................................... AGCCTGCATAGATGCTAGCTTAGTTGTTGC 840 36 100.0 28 .................................... ACCAGTTCTATCCACTTAAAACAATACA 904 36 88.9 27 AG................................CT GTTTGAGTTCCAAAGCTGCTGATGAAT 967 36 94.4 0 CG.................................. | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 98.9 30 GTTTTACCGTTACTGAATCCTTAAGAGTACAAAAAC # Left flank : CTTAAGAGTACAAAAACGTCTTTTTGTTTACAAAAGCTGGATTCAAGG # Right flank : GTG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACCGTTACTGAATCCTTAAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 62-558 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHYZ01000166.1 Liquorilactobacillus vini DSM 20605 contig00194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 62 36 100.0 30 .................................... TCATCACCAATACGATTGTACATTTTAATT 128 36 100.0 30 .................................... CTATCAGTCGAACTATTGATTTAAATTGAT 194 36 100.0 30 .................................... TTGCTAAGGCTAAAATTTGGATAGCCTGTA 260 36 100.0 30 .................................... TACCCTTGAGGCTGTATATCCACAAAAAAC 326 36 94.4 29 ..................................CA GAATGGTATATCGAATATGTAAATACGGT 391 36 100.0 30 .................................... TTTAAGCTCGTTTAGCACAGCGAGGGCTAA 457 36 100.0 30 .................................... ATGGATATACAACAGCGATTAGCTAAGGTT 523 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.3 30 GTTTTACCGTTACTGAATCCTTAAGAGTACAAAAAC # Left flank : CCGTTACTGAATCCTTAAGAGTACAAAAAACCTAAGCAAACTTTCATTGACGTTGTTAAAAG # Right flank : CCTCAAAATGGAAAAAAGTCGAAGATTATTTACCATAAAGAAAATTTTCTTCACAGTCGGTCAGCTCATTTCTGTTTCCCTTAATTAGCTGAATTTCATTGCATCCAAGCAATTCATCAACTAACTTTAATAATAGCATATTCTTTTTATCCAGAAAAACATTTTTATAATTTTTCTGATCAATGTACGGAAAAATCTTAAACAAATTTCCCAGTAAATCTTCTTCATCATCGAATTCATTATCTGGATAATTATTTTTTATTGAATTCAAAAAAATATCATAGGGGGGAAGCTGTTGTATTTCGTTATATATAAGAACAGTATTCTCCATATCTTCTGGCTCATAAGCAATGTCCAAGAAATCATCACTAACAATAAAAACTCTTAAAAGTTTAGTTTCATTAGTAATTTTTCTCAAGACAGCAATAAATTTTTTCAAGCTTCCCTTGGCCAAAAATGAATTTGGATTTTTTATCCATAACCAGATTGGCTTACTTTCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACCGTTACTGAATCCTTAAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //