Array 1 74583-73698 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBZK010000002.1 Streptomyces sp. S07_1.15 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 74582 29 100.0 32 ............................. GCCACCGGCGCGACGGTGACCGGTGACCACCT 74521 29 96.6 32 ............................T TAGTCGGGGATCGAGTTATCCGGGTCCTTGGG 74460 29 100.0 33 ............................. ACGTCACCATGCAGGACCTGTTCAACCGGGTCG 74398 29 100.0 32 ............................. AGGGCCGCGGGGGTGGCCAGTCATGAGCCACC 74337 29 100.0 32 ............................. CAGCGCGCTCCACGAAACACCGGACGATCGCC 74276 29 100.0 32 ............................. GCTTTCGCGCTGGGGGGGCTCTGGATCCTCCT 74215 29 100.0 32 ............................. GATTTCAGCGTTCGTACGGAACGGAAGCGCGT 74154 29 100.0 32 ............................. TACGACGAGGCGGTCGAGAAGCACGGCAAGTC 74093 29 100.0 32 ............................. CAACTAAAATTCGGGGGACAGTCATCGGCAGA 74032 29 100.0 32 ............................. TCGTTCCAGTTCGATGTCGGTGAGGCCGCCGT 73971 29 100.0 32 ............................. CGCTCCGAGGGCGTCGCGGTGCACTATTTCCA 73910 29 100.0 33 ............................. GGTCCGGTCGGACTTGTCGTAGCCGGCCCGCAC 73848 29 100.0 32 ............................. TAGTCCGAGGCGGAGATGGTGACGCCACCGGA 73787 29 96.6 32 ..............G.............. CTCACGGCCGCCCACGGGGATGACGACGACTG 73726 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================= ================== 15 29 99.3 32 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : CCCGCGCATCGTCGCCGACGTCCAGCAGCTCCTCGACCCCGACACCGAATACGAGGTCCCCGACCCGGAGGAGCAACTGGTCGACCTGTGGGACCCGGTAGCCGGAGCCATCCCCGGCGGGGTCAACCACGGAGTGGAGCCGTGACCGCGCCCACGAAGGGACACCGCCCATGTCCTCAATGATCGTCATCTCCGCCACGGCAATCCCCGACCACCTCCGCGGCGCCCTGAGCCGCTGGCTGCTGGAGGTGACACCAGAGCTGTACGTGGGCACGGTCTCGGCCCGGGTCCGCGACGAACTCTGGACATCGGTCGCCGCCTGCGCCGGAGACGGTATGGCCGTCCTCGCCCACCCCGACGACAACGAGCAGGGCTTCACCCTCCGCACGGCCGGCACCCGCCGCCGAGAGCCGATGGACTTCGACGGCTTGACCCTGATCGGCTTCCGCAGGGAGAGTCAAGAAATGGCAAATCGCTTCTGAAAGCGCAGGTCGGGAAGT # Right flank : GTGGAGCTGGCCCAGCTTGCGGGTCTGTTGGTGCAGTCGGAGGCGGCGCCGCAGCTGCTGGCCGGCCGACTCACCGACCGGCTGGAGGAAACTGGCGGCGAGGCTCTGGTCGAGCGACCGTTCCCGTGGCTGATCCGGCGGAGCCTGGTGCAGCGTCAGGCGTGCTCGGACCGCCGGTGTGATGACGGTGTGCAGCTGGACACCGGCGGTGCATGCGACACCTGCGGCAATGTGATCCACTTCCGTCGGACACGCCGTGCGAAGGCCGCTGCCGAGCTTGACCGAGATCGAGGACCGGGAGCGGCTCCGCTCGAGCGGAGAGCACTCCAGCGGGGCGCGCATCGAGCGAGTGCTGTGGCCGGAATGGCGGAGAGGACACATCCCCGCAGAACCTGGTCCGTCTCGCCGCCCTCATCCTCGCTTCCCACGCCCGCGGCCGCAAAGTCGAAGAACACGGCGAAGCAGGCCGCAGCCGTCGACCCGGACAGCCGCCGCCTCGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 84316-87035 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBZK010000002.1 Streptomyces sp. S07_1.15 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 84316 29 100.0 32 ............................. GCGCCACCCTCGTCGCCGCCCTGGTCATGCTC 84377 29 100.0 32 ............................. CCGGAATACGGCGTGATGGGAGGTCTCGCGGT 84438 29 100.0 32 ............................. TCGGCGTCCGGGCGGGGCGGGGCGTTCACCGT 84499 29 100.0 32 ............................. ACGCGGTGCCACGTGGCCAGCAGCGCGTGCCA 84560 29 100.0 32 ............................. GGCTACTGGCACTGGCGCAAGGCCAAGCAAGC 84621 29 100.0 32 ............................. CGGCTCGGGCGTAGCCCGGATAACGCTGATGC 84682 29 100.0 32 ............................. GCTCTGCGGGGGGCCGGCCTCTCCGTCCGGAC 84743 29 100.0 32 ............................. AACATGCGCACCGCGCTCAAGCCGGCCGCTGC 84804 29 100.0 32 ............................. CCAGACAGGGGGCGCTCTGCTGTGGGGTCAGT 84865 29 100.0 32 ............................. ATCCTGCTTGCCGCTCTCGGCGCCGCCCTGGC 84926 29 100.0 40 ............................. GGGGCCGGTCAGTGCCCGGCGGGCAGCGGGTTCCGGTCGT 84995 29 100.0 31 ............................. CCCATCCACCCGCCCCGGCGGCGGCGCCACG 85055 29 100.0 32 ............................. AGCTCGTGGCACTTGTGCCGGTACTGACCTCC 85116 29 100.0 32 ............................. CGGCTGAAGTGCCGGCTCACCGCGGAGGAGTG 85177 29 100.0 32 ............................. CAGATGTGCGCCCGCTGCCCCGTGTGGGCCGA 85238 29 100.0 33 ............................. AACTCAATAGAATTAGTCCATGCTCCCCGATTC 85300 29 100.0 32 ............................. CGATACGAGGTGTCGGCGGACATGCCGAGGGC 85361 29 100.0 32 ............................. AGGCCGGAGGCGACTGATGGCCGAGGCTGTGT 85422 29 100.0 32 ............................. TCGTCGGAGAACGAGAACCCGCCCCACTTCAC 85483 29 100.0 32 ............................. GAGGAGCAGCGCACGATGCTGACGTTCGCGCA 85544 29 100.0 32 ............................. AGAGCGGATTGGCTTGGAGCGTGTGCTCGGTC 85605 29 100.0 32 ............................. GTCCGCAAATTCGGCCGTGCCGTCCCGCCGGA 85666 29 100.0 32 ............................. AGCTGGACGACCTCGAGGCCGTCCGGCCGGAC 85727 29 100.0 32 ............................. CACTACCGGGACCGGATCAGGGCCGGAGCCCT 85788 29 100.0 32 ............................. AGGCCCGCTCCGTCACCCTCACCCCGCACACC 85849 28 93.1 32 ..-..T....................... TCCAGCGGCGGCGGCGCGGTGGGCTCGTACTC 85909 29 100.0 32 ............................. CCGGACCCGGAGGCCCCGTTCTGGGGCGTTGC 85970 29 100.0 32 ............................. TGCCAGAGGTGCACCGCTGCCGGTGTCGTGGT 86031 29 100.0 32 ............................. TACGACAGCCAGGCCTCGCCCTGGCGGATGGC 86092 29 93.1 32 ..G........A................. CCAGCCGCGGATGCGGTGGGTGCAGCGGGTGC 86153 29 96.6 32 ..G.......................... GCGCTCCACCAGGCCCTGCGCTTCCGTGACTG 86214 29 100.0 32 ............................. TCCACTGGACGCTGGCCACCGGGGGCTGGTCG 86275 29 100.0 32 ............................. CTCCGGGCTGTCCGTGCTGCCCGGAGAGGGGG 86336 29 100.0 32 ............................. GGTCGAGGACAACGGCCGGCCGTCGCCGCTGA 86397 29 100.0 32 ............................. TCGCACCGCCCGGAGGGCCTCACGGCTGGGCT 86458 29 100.0 32 ............................. GGCCCGTCGGTGTCGCCGCAGTGGGCGCAGCG 86519 29 100.0 32 ............................. CCGTGGGTGACGATGATCCCGGGGGCTTCCTC 86580 29 100.0 32 ............................. AACATGGCCCCGCCGTCCATGTACGGCACGGC 86641 29 100.0 32 ............................. TAGAACCCGGGGTCGGTGACCCTGATCGTGGG 86702 29 100.0 32 ............................. CGACAACACCGCACAGGGCCCCCTCGCGGTCG 86763 29 100.0 32 ............................. ATGGCGGAGTCCATGGAACTGCTGGCCCGCAA 86824 29 100.0 32 ............................. ATGGCTGAGCTACTGGACGCCAACCAGTGAGG 86885 29 96.6 32 ............................T CTCCTGCCCGACCCGGAGACCGACCAGCCGCG 86946 29 100.0 32 ............................. AAGGAGTTCGGCGGGCTCACCAAGGAGGTGCA 87007 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ======================================== ================== 45 29 99.5 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : TCGCTCTCGGCACCCGGGGCTCGCAGATAGACCGGCTCGTCACGCACAGCCGCGAACGCCGCCGGCACCTGAGCCTGGAACGGCGGCGTGATCTTGCCCAGGTCGTGCAAACCGGCCCAGAACGACAGAACAGTCCGCGTCTCGCCCGGGGACAAGCCCAGAGCATCAGCCAGGCGCTGCCGCATACGCTCGCCGAGCAAACCGTCCCAAAGCGCGGAGAACACAGCGGCAGTGTCGAGCAGGTGACACACCACCGGGTACGGCCGCGATAAGCCGTTCTCCTTTCCCCACATGCGGGGGTCCAGGAGAGGTGTTCCGCCGGCCGGGGCATCGCTGTTCATCATGTGCCAGAGGTAGCAGTCGACACTGACAACGCCAGTGCGCCCATACACTGACCTGTCATGACCTCACCTCGCAGCGCCGGTTCCGTGCGCGTCTGGGTGCGGCTGCATGATGGCAAAGTAATTGCAAAGGCGCTCTAGAAGGCCAGGTCAGGAAGT # Right flank : GCCCAGCCGGTTGACCGCGCGCCTTGCTGTGTGCGCAACGGGGTGCGCGAGGGCGACCCCGGCCATTACGCTGCAAAGCGATATCGGAATGGTCTATCAGATCTTGGGGTCTAGGTGAGCGGCGGACAGCAGTGGACGATCGACAGCATCGCGCACGCCCTTCCGCACTCCGAGCTGCGTGCCACCTTCATGCGTGAGGCGTCCTTCACCGACGTCCATCGGCTCCCCGACATCCTCCAGCGGTGGGTTGATTTCATCGAACGGTTCGAAGCCGAACGCCCGCGCGTGGAGGAGCTCCAGGCCTACTATCGTGACCACGGACAGTTGCCGCCCGAGCACGAGAACGAGTCGGCCGAGGGTGCCGCACTGTACCGGCAGTGGAAGACACGGACGGAGCACCAAGGAGCCGCGTGACCTGGCACGTGCATATCACCGAGCACACCTTCCGGATGCTCCGCGGCCTCTCCGACAATGCCCTCGGTGAAGTGTTCGACCTCTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 92113-92627 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBZK010000002.1 Streptomyces sp. S07_1.15 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 92113 29 100.0 31 ............................. GTTTGACTCCCGCGACCTTGAGCGAGTCCGG 92173 29 93.1 32 ..G.......T.................. GCACCCGCCGTGGCAGCGATGGCTCATACGTC 92234 29 96.6 30 .......T..................... GCCTGCGGAAGTTCGCGCACCTACCCTGAA 92293 29 96.6 32 ..........T.................. GGGTAGGACTGCTCGGGGGAGGGGACCTCGTC 92354 29 100.0 32 ............................. CTCATCGCGCCCATCATGTCGTTGGGGGCGTC 92415 29 100.0 32 ............................. CTGGCCATGGTGAAGCCGCGCGGGTCCACCTT 92476 29 100.0 32 ............................. TTGTACATGGTCGTGAGCTTGTGGGTTCCCGA 92537 29 100.0 32 ............................. CCCTCGACGCTGGTGATCTCGGACTGGATGGT 92598 29 75.9 0 ............T......C..C..TGTT | C [92616] ========== ====== ====== ====== ============================= ================================ ================== 9 29 95.8 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CTGCTCACTGACGACGAACTCGATGACCACCCCGACCCGGGCGCCGTCCTACAGTCCTGGCTGGACGCCCCCGAAACCGACGGCGTGTGGACGGACCGGGAGGTATACCGGGCCGTCCTCAAATCCCGCCACCACACCCTGCACCACCTACGCCAGCTGCCCGCCGGCGACGTCGTCACCGAACCTAACCTCGCCCTGCCCCCTCTGCTTACCCACTGCGGCAACCAGCCCCACCGGTGGAAGGCCCTGCTCAAGGCCCTCGACTATGGACCGCAGGACGAAAAGATCACTTTCGGACAGGTCCTCGACAGCATCGAGGCCTCATCTACCGGCGCGGGCTCGCCGGCGGGCACAGGCACATGAAGTGTGGCCTCGGTCATCGACGTGTCTTGCGGCAGGTCACAGGATTCCACGCTGGCGGGGGCGAGCCATGACGACACCGTCCGAGACGGCCTCAGGTGCGTGCGATGGCCGCTTTGCCGTTCACAGGAGTGAGGGGA # Right flank : TCACGAGGACGGGGGTCGGCGGTGAACCTCAGGATCCGTGGGCTTGCAGGTCGGCGAAGGTGGCAACCGTCGCCGACCACGCCCGCTCGTTCGGAACACGATGCCACCCGATCAGCGAGTCGGGCGTGACGGTGTCGGGCCGGATCATGTAGCCGAGCATGACGAGTTCGCACCCGGCCGCCGCCGCAGCGTCCGGCGGGAACTCCGGCCAGTCCGGCCACTGGTGTAGTTCCCGTTCGGCAACTGGCTGGGCACTCCCCTGCTGCACGACCTGCAGCACCCATCCCTTCTGTGCCGCTCTGCACACAGCCGTGAGATCGTGGCGCTTCTCTGTCGTCATATCGGGACACTAACGGGCCCGAAGGCTGCGGGCCCCTTCCAGGGCCGCCATGGCGGATCCGGCCGTCTCAGGACGGGGCCTGCCGTGCAGCTGCGCCAGCCGCGTGTCTAGCAAGTACTGGGCGGTGCGCTGCCGGGCGGCGTCGGCGGCCTTGGCCGCG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 910516-910664 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBZK010000001.1 Streptomyces sp. S07_1.15 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 910516 29 100.0 32 ............................. TTCCGGGGGGAAGCCCATGCAGCGCCGTCCCT 910577 29 100.0 30 ............................. CGGATCGAACCGGCGACGTCGGCGCCCGGC 910636 29 86.2 0 .....................CC..C..G | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GGAGCGACCTCAGCGAAGCCGAATTGGCGGAGGTTGGGATCGGCCCGAGGATGTCCGAGCCCGGGGACGACTCCGGGTGCGCACCGATGCGCGCAGTGCAGCAGGACCGCTGAACCGGCGCGGCGGCCGGGCATCCTGGAAACCACGCCGCCACGGGTGATTCGCCGACGAGGATGGGGACTCCCCGCCGCCCGCTGCCGGAGCTCCGCCGACGTGCCGGAACCCCGTCCGTCCTGGTTGTCAGCACGATGTCCGGTGCCAATCGGCGCAGCGCGTGCAGCGGCCCCACGGCTCTCGGACGGCGGAGGTAGATGGCCGGGCGGCCAGGGGCGACGTCAGGACGGGGGCGGTGCCGGGCGGACGAGTGGAAGAATGCTGCGGGGGTTGCAGAGCCTATGAAAGAACAGACGAACACTATGCCCGTTTCACTGCTTTCGCGAAGATCGGCGAAAGTAAGTAAAAACAGCGTCCCTCGCCAGTAAACCTGCAGGTCGCGAACT # Right flank : GAGGCATCGGCCACGCGTTCGACGGCTGCCGCCCGAGGCAGAGGGACCGGCCGCCCCGGATGATCTAGAGTTCCGGCGGCGGCAATTGACCCGCCGAACAGACACTCGGCTCAGGGGTGGGGATTGATCACTTCAATATTGGCTGCTGCTCCGCAGCGGCGCAAAGCCTCGGCTGCACGGCGTGCGGCCGTCGCGGCGGTGGCCGGGGGCATGGCGTTGGCGGGCGTGGGGCTCACGGCGCCGAGCGCGCACGCCGCCGACAGTGACATCTCGTTCTCGAACGTCGTGTTCAACAATGGCAAGCCCATCGTCGTCGGCATCAGCGCCGAGGTCGAGGCCCCGTTGACGTACACCGTCAAGAGCAAGGTGACGCTCGACTCCTGGTGGGTCGAGGCCTACCGGGGCACTTACGGGACCAACGAGTACACGCTCGCGGGGACCACGACCAGGTGGGGCTGCGGGCGGTCCTCCGCGGGCGGCTACACCTTCCACGACTGCGA # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5030564-5029448 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBZK010000001.1 Streptomyces sp. S07_1.15 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5030563 27 96.4 34 ........-................... ACGCCGAGGCGGCGCGCCGCGCGGGCATCAACGT 5030502 27 96.4 33 ........-................... CCGGCACCGCGTGGTCGCGGATGCGGCCAAGGC 5030442 27 92.9 33 ........-..G................ GACGGCCTTCAGCGGCTGCTGCGGGCCCGCTAT 5030382 28 100.0 33 ............................ GCTCGCGATCGTGCGCGCCATCCGGTCGCTGCA 5030321 28 100.0 33 ............................ CTGGCGGCGCAGGTGCAGGACATGGGTGGAACG 5030260 28 100.0 33 ............................ GCCCGGCCCGGCCGCACCGGTCGAGCACCCGCC 5030199 28 100.0 33 ............................ TTCATTCGGGAGCGCGTTTTCCCGGGTGCTCGG 5030138 28 100.0 33 ............................ GGCGTCCCGCTCGTCGTCGTCCCGAGTCCAGAT 5030077 28 100.0 33 ............................ CAGGCCGGTCACCAGGTCCATGACCGTGCTCGC 5030016 28 100.0 33 ............................ CCGGGTCCGGGTGGATCAGGGGAGAGGACGACC 5029955 28 100.0 33 ............................ TGCCACGACAGACTCCCGGGAAGGGTCGGGGGC 5029894 28 100.0 33 ............................ GCGCTCGGGGCCGCTCTGCGGGCCGCTCTGCTC 5029833 28 100.0 33 ............................ GTGCCCGACGACGTGTTCGACGCCCGGCCCGAC 5029772 28 96.4 33 ................T........... GCCGTGGGTGACCAGGCCGCCGATGATGGAGGG C [5029763] 5029710 28 100.0 33 ............................ GGCGGTGCCGCTCGCGCCGTCGTCGGTGACGGT 5029649 28 89.3 25 ......A.................G..T GGGGGAACGCCAGATGCTCCGGCAC Deletion [5029597] 5029596 28 100.0 33 ............................ GCCCGCCACCGTCGACCGGTACGTCCACCTGCT 5029535 28 96.4 32 .........................C.. TGCGGAAGCCCCCGTCGTGGCGGGGCTGGTGG 5029475 28 96.4 0 .......................C.... | ========== ====== ====== ====== ============================ ================================== ================== 19 28 98.1 33 GTCGGCCCCGCACCCGCGGGGATGTTCC # Left flank : CCCATGGAAGCAAACGGCGAACCTGGCCATGCCTCTCCCCTACCGGCTGACATGGGTGAACAGCACATCGCGGTCATCGGCCCCGAACTCGATCAGTCCCCATCCGCGGATAAACTCAGATGACCGTCATCGTTCTCGTTGCAGCCCCCGAAGGACTACGCGGCCATCTCACCCGGTGGATGGTCGAAGTCAATGCCGGCGTATTCGTCGGCAACCCCAGCCGCCGTGTCCGCGACCGCCTATGGGAACTCCTGGCCAGCCGCATCGGCGACGGCCAAGCCGTCCTCGTCGAACCGTCAGCCAACGAACAGGGCTGGGCGGTCCGCACCGCAGGCCGCGACCGCTGGCGCCCCGTCGACTACGACGGCCTCATCCTCTCCGCACGTAACCGGCGATGATCCCACGCACCAGTCCGGTTAGCACCGGCCGACGCCACCCGCCCTTGAACCCAACTAAAGGAAAACACGCCTCTGCGGAGACATAACCCCAGGTCAATAAGC # Right flank : CTCCTGCTCACCGATCTTCAGGCACCGCCGCGAATAAGGAATGGCCCTGACCCGCAGCCCTCTCGGGGTCAGGGCCATGAAGGTGGACGAGTCGGCTTGTACGTCGGGTTCAGAGTGTGACGGCCGCCGTGACCATCAGCGTCTCGCTCCCCATCAGCGCCGATCCTGCTTCCCATGTTTTGCGGCTCCTGCCGGGGGCGCCATCGGCCCAGCGTCGACTGGGTCACATTCCCGCAGCTCAGTCCGCATGTACCAGCCTTCCGGAGTGCAGTGCGCCACCGGAGCGGGAGTTCCGCCGGCACCGGCCGGGAACGGGTTTCCACGGGGAGAGGGTTTCCACGGGAGAGGCCCCGCCGGCCGGCGGGGCCAAGGGCGGCCGCTACCCCTTCCATCCCGCCCTCCGTCCCGCGTCCGCGGCGCGGCCCGGTGTGTGGCCGAAGGCGCGGCGGAAGACGTCGATGAACGCGCTCGCCGAGGACCAGCCGCAGCGGTGCGCCACC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 5040838-5041414 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBZK010000001.1 Streptomyces sp. S07_1.15 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5040838 28 100.0 33 ............................ GTGGGGCCCGCGGTTGCGGGAGACCCGCGACGC 5040899 28 100.0 33 ............................ CGGCGGGTTCACCCCCGGCGCGGCCGCGCTGGA 5040960 28 100.0 33 ............................ CGGCCCTTCTCCCACCCGCTCACGGCTCCGCGG 5041021 28 100.0 33 ............................ CCGGTCGAGCCGGGCCGCGAGCGCGGGTGCGTC 5041082 28 100.0 33 ............................ CGTCTCCTCCACGTCCGGGTTCGGCATCGTGGT 5041143 28 100.0 33 ............................ GCGCGTACGGCACTGGGAGTGCCGCCGCTTCCT 5041204 28 100.0 33 ............................ GGAGGCCGCCGCATGAGCCTGCCCGAGAACGGC 5041265 28 100.0 33 ............................ TCGACGTGCAGCGCTGTGCGCACGGGCCCGGAG 5041326 28 100.0 33 ............................ GCGCATCAGTCTGGAGGCGAAGAAGCTCACCGC 5041387 28 67.9 0 ..T.........TTGA....TGC..G.. | ========== ====== ====== ====== ============================ ================================= ================== 10 28 96.8 33 GTCGGCCCCGCACCCGCGGGGATGGTCC # Left flank : GTCGCCTCATGCCACCCCAGCCCGGCGGTACGAACCACGTCCGCACCTTCGGGCCACAGTCTCTGAAACGCCGGCGTGGCTTTTCCACAATCGTGAATCCCGCACAGCCAGGAGAAGATTTTCCTCCCTCCGCCGTGTCCGCCGGCCACCTCGTCCAGCAGTTCCCGGGTCGATGGCGCCAGGTAGCTATCCCAGAGGCGTTCGGCCACCGCTGCGGTGTCCAGCAGGTGCGACAACAGGAGGTTCTTCTTCCCGCCTGCCTTTTCCGCTGACTTCCCCCACAACACACTCAGCATCCGGACCAGTTCCGGATCCTCCTCCAACTCCCCTTGCCCCACCGCGAACCCCCAGTACTCAATGGACTGGCGAGCTACCCTAAGCGCCATCACTGACAGCGGCCTCGCACCGCCGTGACGCACCCACTGCTGCTCTCAGGAGCTTTGAAATCGAACTGGAATAAGATCGGGCCCCCTCCTGGGTAAACTCCCAGGTCAGCAAGT # Right flank : CATGAAGGGGTTGGGGAATGGGCAGGGACGGCATGGCACTCGCAAGATGCCCCCGGTGTCGGGCTCGCTGCAAGTACGAGTGCCGTGGGGAGCTTCTGGGTGACTGGGCGGAAGACATGGCTCATGATTGGAAACCAGAAACCCTGGATTCTCTTCCGCTGAATCTGCGTTCCTCGTATCCTGGGATGATTCTGGTGGGTGAGCTCCGCCTCCGGCACTTGGAAGTGCGGCGTCATGGGTTTGTAAGTCCATGAAAAACTTTCCGAGAGTGGTATTCCGCTCTTCATCGATCCACGGTTTGGTGGTCGCGTCGTAGTCGCGATCAGCGAAAGGTTCTACCGTGGTTAATGGCGTTTTTGTGGCCTCGCTCTCGCTACTCTTCCTGAGCGCTATCGGCCCCCTTGTGCTCCTTGGCGCGCGCGCATGTATGGAGCCTGGGCCCGGGCGGCATCGCGCTGTCGGGCGCCGTCGTCCAGTGTGGGGAGGGTGGCGATGACACA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCTGCGGGGATGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //