Array 1 1011010-1014466 **** Predicted by CRISPRDetect 2.4 *** >NC_016077.1 Acidaminococcus intestini RyC-MR95, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1011010 36 100.0 30 .................................... TCCAGTTTTTGGGGTACACATCAGACTTCT 1011076 36 100.0 30 .................................... TGCGCAAGCGTCTGTCGCGGAGCAAGCTTT 1011142 36 100.0 30 .................................... TGAATACGGCATTGACATTGACACCGATAC 1011208 36 100.0 30 .................................... AGCTGTGCAATCCTTGTCGGATGGCTGGCG 1011274 36 100.0 29 .................................... CGGGTCAAAGAATCTATCGCGGAAATGGG 1011339 36 100.0 30 .................................... GCCGATGGTAATGGCCTTGCCGGCGGCAAT 1011405 36 100.0 30 .................................... AAATGCAGCTGAAAAGAATATAATAACACT 1011471 36 100.0 30 .................................... GTTCATTCATACCCATTGCTTTTACCACTT 1011537 36 100.0 29 .................................... CTGGATTCTTGGCTAGCATCACGACATGT 1011602 36 100.0 30 .................................... TTACAAACTGTTTGATTGCCTTATACTGTC 1011668 36 100.0 30 .................................... GCTGGTCGGTCTGATCTCACCCTTGATGGC 1011734 36 100.0 30 .................................... AGTTGAGCTCCTGTTCATACAGGCTGATGT 1011800 36 100.0 30 .................................... GGACTATCTGACGAAGGCGCTGATTGGCTA 1011866 36 100.0 29 .................................... TTCTCTGCTTGTTACTAATGCTCCTTGCA 1011931 36 100.0 30 .................................... ATAGGAGGGCATTCGATGAGCCTTGAATGC 1011997 36 100.0 30 .................................... GATGAGAGATGCTGCTGCTTGCTGGTTTCC 1012063 36 100.0 30 .................................... CGGCTATTTGCTGATTCGTAAGGCCCCGTT 1012129 36 100.0 29 .................................... CCCGGCCACTTCAAACCCTTTGGCGTCAT 1012194 36 100.0 30 .................................... TGATCATATACTCTTCAAAAGCCGTTAAGT 1012260 36 100.0 30 .................................... CAAGCTCCTGAAGCTCCGGTAAGTTGGCCG 1012326 36 100.0 30 .................................... TCAAAACCCTCGCCAAAGAGGTCAACATTA 1012392 36 100.0 30 .................................... CGTCGGCGTCATCCACGGTTTTGCCCTCCC 1012458 36 100.0 30 .................................... CATCCAGCCCGGGACGAAAATCAAGATTAG 1012524 36 100.0 30 .................................... GGGTATAGCACTGTGTTACTGCCTATCACA 1012590 36 100.0 30 .................................... CTTTTTCATTAGCGTATCCGAAAGCTCATC 1012656 36 100.0 30 .................................... GGTCGGACTGGACGGTTTCGCCCCAGAGAC 1012722 36 100.0 29 .................................... ATTAAGCCCTTCGGAAAGCTTTTCTGGGT 1012787 36 100.0 30 .................................... GGAATATCATATCGTCATAGCAGACGATGT 1012853 36 100.0 29 .................................... CTTAATCTCGCCCCCGAGGAGCCGGTCGA 1012918 36 100.0 29 .................................... CTTCACCTTCTCCCAATTTTACTACATTT 1012983 36 100.0 30 .................................... ACAGTTTGGCGAATTCTTCCAGAAGCTTCA 1013049 36 100.0 30 .................................... TCAACGATGTTCAAAGCCTTGAAATATGAA 1013115 36 100.0 30 .................................... AGTATGACGCTTTTTCCCAATGGCAATTGC 1013181 36 100.0 31 .................................... ATATCCCCGAATATATCGTTCCTTATGACGA 1013248 36 100.0 30 .................................... CATTTTCATCTCTGGTATTAATGGACGTAG 1013314 36 100.0 30 .................................... AGGATTTCCGTCAGCCACGAGCAATGGTTA 1013380 36 100.0 29 .................................... CTGCTGTCTGAAATGCGAATGACAATAAT 1013445 36 100.0 30 .................................... CATGCTCCGCATCGACTGCTGAACGTGGAG 1013511 36 100.0 30 .................................... TCAAAATCTAGGTTGCGTTTAATGGAATCC 1013577 36 100.0 30 .................................... ATCTTGCCCGTGATCCGTCGGGCCAACAAA 1013643 36 100.0 29 .................................... CTTAACCACAAAAATGACCTTTAGGAGGT 1013708 36 100.0 30 .................................... CAATCTGGCCACGAACAAGCCGCCGACGGT 1013774 36 100.0 29 .................................... TTCCTGCTGTGTAAGTTTTGATAATGCTC 1013839 36 100.0 29 .................................... TGATAATAATCTCCGGTGTAGTTTTTGCC 1013904 36 100.0 29 .................................... TGTCATACTCAGGGTGCTGTTGTTGAATA 1013969 36 100.0 30 .................................... GAACGCTATGCCGTTGACCTTCACGTTCGA 1014035 36 100.0 30 .................................... AGTCAGTAAGGCCAAAGAGCTGCAGTCTCA 1014101 36 100.0 30 .................................... CGCTGTCGCTGACTCCGTTCTGGCGTCTGA 1014167 36 100.0 30 .................................... ACTTGCCACGCAAGTTCCAGACTTCAACAT 1014233 36 100.0 30 .................................... AAACATCGGACACAGAGCGCTTGGCCGCGT 1014299 36 100.0 30 .................................... CGACGTTGACGTCAGCGATTTGCCTGACTG 1014365 36 100.0 30 .................................... AATGAAAGTCAAAGGGCTCCCCAGGGCCCT 1014431 36 91.7 0 ..............................CT..G. | ========== ====== ====== ====== ==================================== =============================== ================== 53 36 99.8 30 GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC # Left flank : GTTCCCAAAATGCTTCTTACGAAGATCCAAAAAAGAATGGAATTTCAAGCTACAAATGGGCCTTTATTTGAAAACACACAGATTCTGTTAGCACAAATGGAACACCTAGCGGAAGAAATCGCCATGAGTCTAGATCTTGAAATAGATTGCGAAAAATTAACGGTTGGAAATCTCTTAAAAGCCTTGGGAATCACTATTAATTTGGATTATAATGGACTTGGTGAAAAAATCTTTGTTCTTATGGATCTTATTTCACGCTTTGAAGGAGATAAAATCTTTATTCTAGTCAATCTTCGAAGCTATCTTTCTAGTGAAGAAATACAGCTTTTTGTGGATACGGCCTTGGCTCATGACCTTAAATTTTTGCTTATAGATAACCGCCGATATCCCTTGTTTCATCAGGAAAAGAGGGTTCTTATAGATAACGATTTATGTGTATTATAAATTAGCACCTTTTGAATTTATCTACACGGAATGATAATCCGTTGATCAAATTTGAG # Right flank : CGTAAAATGTTTTTCGGTAGGGAAAAATAGTCCTTGCAGAATAAAAGGGAGGCCCCTATTGTTAAGATAGTGTTAACGGCACGAATATCAAAACAAAGGAAGGTCTCCCATGGAAAAGATTGTATCAGATGTCATCAAAATAATAAAAGGGTCTAAGAACGAAATTGAGATGGAAAAGGTCCTCTGGACCTTTCTCCTAAACACCGTTATCGCCATGATTGCCCTTGCCTTTGAGCGAATTAATGATGAGCTCTTTGCATCCCTCAAGGCAGAAGGATATAAGGTACAGCGCAAGGATGCACGCACCATTCAAGGTATCTTTGGTCCTTTGACCTACGAACGGAGGTTGGTGAAGAAGGAGGGAGAAAAGGCCTTCTATCCCCTTGATAGGCATCTGGGGTTTGAGCGCTACCGCAGGTACACGCCCTACCTTGAGTTCTGTGTGGTCAAGCTGGCTGCAAGGTCCGTCTACCGCGTTGTGGAAGAGTCCATCAAGATCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //