Array 1 15969-17352 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021838.1 Anoxybacillus flavithermus strain 52-1A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 15969 30 100.0 39 .............................. GTCAATCAGTCGGAATCATAACAAGCCGAGCGCAGCGGA 16038 30 100.0 39 .............................. AAACTACATCCTCAACCGCTCTTTCTGTCGGAAAATCAG 16107 30 100.0 36 .............................. GTAATTTCATTAAAAACTTTAAGCTTTAACATTTTT 16173 30 100.0 37 .............................. ATATCGTGCACGATCCGTACGTGACGCCGTTGTCGTC 16240 30 100.0 39 .............................. ACGCTTTGCGGTAGCGTCAAACCTTTTATTTTTTTACGA 16309 30 100.0 39 .............................. CTCTCTCCACGGCTTTGCGTCCGTGCGCTTCTTTTTGTT 16378 30 100.0 39 .............................. ACCCAGCACCTCTCAATTCTGTTGCGAAAAAAGTGAAGT 16447 30 100.0 39 .............................. ATGTCGCTTCATCTGGAAAATGAAAATTTGCGCCCTCGT 16516 30 100.0 36 .............................. GCGAAAGCAAAATCTTTTTCTGAAAGCTCGATTGAC 16582 30 100.0 35 .............................. TCCCTCCCCTGCTTGTCCACTTTCGTCTCAAAAGG 16647 30 100.0 37 .............................. CGTATAGACAAAAAGAAAACTTGAAATTCACAACTTA 16714 30 100.0 38 .............................. TCAGTATTCTATTCGGAATGAAGATATGGCAATCTATT 16782 30 100.0 38 .............................. GAATGATTGAAAATACTTCCTGCTCGTTTTCTTGTTGA 16850 30 100.0 35 .............................. CCTTGCCATTCAAATTTTGTTTTATATTTAACACC 16915 30 100.0 39 .............................. TAATCATCTATTCTTAATGTTTTATTTTCATATATTAGC 16984 30 100.0 34 .............................. AAAAGCGTGTGAGAAGGGCAAAAGGTGAGGAAAA 17048 30 100.0 39 .............................. GTTGGACGAACTAGAATGCTTGAAGTCGTTGTCTTTTGA 17117 30 100.0 38 .............................. CTACACGTTACGCCATGTGTTGGCGATGCAAAAACTAA 17185 30 100.0 38 .............................. TCTGGTCTAAAATTCCCGTTCCTAGCTGAAGTCGTAAC 17253 30 100.0 39 .............................. CTCCGTTTGTAATGCTTTCGGATGCTGTCAAGTATCTAG 17322 30 86.7 0 ......................G...CC.T | T [17347] ========== ====== ====== ====== ============================== ======================================= ================== 21 30 99.4 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AAGATGATTTAAAGCAATTATCCTTTACTTGTCCGCTTGTTTCCGATGAAAAAAATAAAGGACAATCAAGTCGATGAATTTGCTCGCTATTTAATCATTAACTACCATTTTGGAGTTCATATTATTCATCGTGATTATGTAAGAATATGCTATGAAATTCGCTCTAGAGATCGTCTTGTTTGGGTAAATATAGAAAACAAAAATAAGAATTCATGCACATATGTACAAGGTGATTTGAATTTATTTGACGAAGTGTACCATATTTATATTGAATTTGAACGTATCATAAGTAAAGTACTGTAAAATCTACTTATTGTGAATTTATTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 26341-27315 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021838.1 Anoxybacillus flavithermus strain 52-1A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 26341 30 100.0 37 .............................. CTCCATACGTTCGAGTTATTTGGTGGAGCATCATAGC 26408 30 100.0 38 .............................. AAAAATGCGCATAGTCGGAAAGACTATACGCATTAGTA 26476 30 100.0 38 .............................. TATAGGCAATTCATTTTCCACCTTTTTCCTTCACGTTT 26544 30 100.0 39 .............................. ATTTCCTGCTCGAAGGCGAGAGTAAAAAATCGTTTAAGC 26613 30 100.0 38 .............................. TGCGCTCCGCAAGCTCCACAAGAACATAGTCAACGACA 26681 30 100.0 39 .............................. ACTTATTAGGTAAAAAATTTATTAATGAGCCGTGGCCTG 26750 30 100.0 40 .............................. AAATTGGCGCAACCCATGACCAATTTTCTTCAAAAACCCG 26820 30 100.0 37 .............................. TTTAGATTACTTAAGACGAATAAACTAGCGCTTTCAT 26887 30 100.0 35 .............................. TAAAAAAAGAGGACTTAAACGCTTTTAGGGAAGCG 26952 30 100.0 35 .............................. TCTAAAATCTCACTATCTGCTTGTTGCTCGTTCTC 27017 30 100.0 35 .............................. CAGGGGCATATGTCGCGGCTGTCCTCGTCTGGTAC 27082 30 100.0 39 .............................. CGCATACTCATCGACTGGGTTGGATTCACGTTAAGTCCT 27151 30 100.0 37 .............................. TCGCTGTCAATCTTGTGCTTTGAACAAAAGAAAAGCG 27218 30 100.0 38 .............................. TTTCTCAAACGGATAAGCAAATAAATAAAGTGATTCGT 27286 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 15 30 100.0 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : ACGTTGGATGGAAAGAAAAAAACACAGTTTTTTGATCCGGACGACGAAGTGTTTTCACATTTAATAGAACGGAATTTTTATAACAAATATGAAGCATATTACGGTGTTCCACCAAGCGATCGGCTACTCATCGAACCTGTCGATGTTCGAAAATGCGATCGGGTCGTAACGAGCTTTAAAGGCTTTTACATTACAGCGTGGAAAGGGCGGTATAAGCTCATTTCTTCTCCGGAAAATTTAACGTTTTTGTACCGTGTAGGTATCGGTGGACGAAACTCACAAGGATTCGGCATGTTCCGCATCATAAAAGAAAAGTGAAACATTTCACAGCTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : CTCGTATTGGTCACTAGTCAGCGCTTCTACAGTAAAAAGTTTGTATAGTACTTAGTTAGTTTGACGTTGGCGGTATTGTGCTTGTCCCTCTTCACTTTCTATATACATCCAAATTGGCATTTTAACCTCTGATTTACGCAGCACACCCGATGCGGCGTAACACCTCATCTGGGTGCTGTAAGACGTGCTGTTCAAAGCGAGTAATGGATTGGGCAATGTCATTTTGATCCTTGTGAAAAACGTTGGCAATCACTTCATCTTTCAACCATTTCCACAGCCATTCAATCGGATTTAACTGTGGAGAATACGGTGGCAAAAAGATGAAATGAAAAGCATCGCCTTCCTCGCCATCAAGAAAGGCTTGCACCATCTTGGCATGATGAATACGCGCATTGTTCAACACAAGCACGAGGAATCGGTCCGTATATTTCTCTTTCAATCGGTGCAAAAAGTCGAGGAACGTTTCGGCATTGGCGGATGATGCGCGATGAAATACCACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 1178923-1178014 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021838.1 Anoxybacillus flavithermus strain 52-1A chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1178922 30 100.0 38 .............................. CTGGAAAATGAAAATTTGCGCCCTCGTACTCGTAACAC 1178854 30 100.0 39 .............................. TGGTATCTTTTACTTAGAAAAATTTTTTCTGACAAAAAA 1178785 30 100.0 36 .............................. GCTACCAACAGTATAATCTTAAACGTAATGAAGCGC 1178719 30 100.0 35 .............................. CATGGACAAGCCTGTGGGTCGGAAAGGAAAGCGGA 1178654 30 100.0 39 .............................. TGATTACGTTGATTTTTGTATTACGAAAATATCGTCTGA 1178585 30 100.0 39 .............................. TTGATTCGCTCGGCGGATGGTTTAAAGAGGTCTTTAACG 1178516 30 100.0 35 .............................. TGTGGAGTGAAAAGTACATGCTTGACGGTTTTTAT 1178451 30 100.0 39 .............................. CACTTCTGCTTAATTTCGATGTTTCGATTTCTCGGCTCG 1178382 30 100.0 37 .............................. GTGGGATAAATATTTGGGCGACGTTGAAAAAATATCG 1178315 30 100.0 37 .............................. AGGGAGTGGGGGGATTGTTTTACATCTAAAATGAGAA 1178248 30 100.0 36 .............................. ACGAGTCGTACATCCGTAGACGAATCCGCGAATTTC 1178182 30 100.0 41 .............................. CCTCAATTGAGGCTCAGAACTCGTACTTCGTATCTTCCCAA 1178111 30 100.0 38 .............................. CTAACATCAAGCAAGCAGTTTGTGGAATTAATTCGATT 1178043 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 14 30 100.0 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : ACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 2799691-2801069 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021838.1 Anoxybacillus flavithermus strain 52-1A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2799691 30 100.0 39 .............................. TGTCGAAACATTCGTGCACCTTTGCAACCTCCGATCTCA 2799760 30 100.0 38 .............................. ATGCAATAGATGACGTTGATAATGTCGGTGCGTACGTC 2799828 30 100.0 39 .............................. ACGCAACAGACGAAAAAAGGATTACAAACTCACTATCCC 2799897 30 100.0 37 .............................. CCTAAATAAAAAATAACATAAAAAAGAGCATAAAGCA 2799964 30 100.0 37 .............................. CTTTTTCGGCAGGGGGGGAATGAATCACTCGTCCCCA 2800031 30 100.0 36 .............................. AGGTTGACGCTGAGGTGTTGCGTTTGTATCGCTTGA 2800097 30 100.0 39 .............................. AACCACCCGCCGAGCGACTCAACGAGCGATGAGAAAAAA 2800166 30 100.0 39 .............................. TTAAAATCGGTTATTTGAAACGTTTTTTCGTAAAATGAC 2800235 30 100.0 39 .............................. TCGTTAGCATTGGAAGGGGGTGAAAAATGTGGGTGCTGT 2800304 30 100.0 38 .............................. ATTGCTTTTTTTGCTGTTTTTTTAGTTCCTTTTGGTGT 2800372 30 100.0 40 .............................. AGCGACAATGTCGCGAAAGTCGGAGACGGCAGCGACAATG 2800442 30 100.0 37 .............................. TTTAGATTACTTAAGACGAATAAACTAGCGCTTTCAT 2800509 30 100.0 37 .............................. TATAAGTGACTTTTCTTTCAACAACCCGACCAGTGTA 2800576 30 100.0 36 .............................. ATGCTAATGTTTTCATTTTTATTCCTCCTTATTTTT 2800642 30 100.0 40 .............................. TGTGATCTCCAAAAGTTCAGTAAGTGCGTTCAAATGCTTC 2800712 30 100.0 36 .............................. ATGAAGAAAAATGTTGATTTCAGCGATATTTTCTAG 2800778 30 100.0 36 .............................. TACAAATATGCTTCTCGGAGCTTATAAATTAAGTAA 2800844 30 100.0 36 .............................. ATTGCTTCGTTTTTATCTACAAATATGTGGGCAGAA 2800910 30 100.0 36 .............................. TCCGTTGCCCAACTTTCTGAACCATCACTTTTTACG 2800976 30 93.3 34 ..C..........................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 2801040 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ======================================== ================== 21 30 98.7 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACTTCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : TTTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACGGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTGGAACAATTAGT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //